BLASTX nr result

ID: Jatropha_contig00025841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00025841
         (630 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006291838.1| orf49 gene product (mitochondrion) [Daucus c...   100   2e-19
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...    98   2e-18
ref|XP_003610975.1| Phosphatidylinositol 4-kinase type 2-beta [M...    73   2e-14
gb|AGC78981.1| hypothetical protein (mitochondrion) [Vicia faba]       79   8e-13
emb|CBI23503.3| unnamed protein product [Vitis vinifera]               70   6e-10
emb|CBI23680.3| unnamed protein product [Vitis vinifera]               69   1e-09
ref|YP_588303.1| hypothetical protein ZeamMp041 [Zea mays subsp....    65   1e-08
gb|ERP57876.1| hypothetical protein POPTR_0008s21690g, partial [...    64   4e-08
gb|AFW86832.1| putative uncharacterized protein orf99-c [Zea mays]     57   4e-06
gb|ABG37638.1| transposase [Populus trichocarpa]                       56   9e-06

>ref|YP_006291838.1| orf49 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081995|gb|AEY81187.1| orf49 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 161

 Score =  100 bits (250), Expect = 2e-19
 Identities = 62/105 (59%), Positives = 67/105 (63%), Gaps = 8/105 (7%)
 Frame = +2

Query: 11  FESNKVSSRGFIATFILKETEEPTFSQ*EPYFPLC---DLITSANQFLS*SPGGAHLWYF 181
           FESNKVSSRGFIATF+LKE+EEPTFSQ     P      L  SAN FLS        WYF
Sbjct: 54  FESNKVSSRGFIATFVLKESEEPTFSQIRALLPSLRPHHLNLSANPFLSHRAERTFGWYF 113

Query: 182 SRASSLIVTSF-----GATNTSMTERAGNSKGSPLEAFAGNQSVT 301
           SRA  LI  SF         TS+ + AGN +GSPLEAFAGNQSVT
Sbjct: 114 SRAGCLIAASFFRLVGRRKATSIYKTAGNLRGSPLEAFAGNQSVT 158


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 44/49 (89%), Positives = 46/49 (93%)
 Frame = -2

Query: 629 YLGNENYRGLYWRDPTVNSCPKERPPGSPRTFSTVPCPQTSSLRAKQDR 483
           YLGNEN RGLYWRDPTVNSCPKE+PPGSPRTFSTVP P+TSSL AKQDR
Sbjct: 266 YLGNENNRGLYWRDPTVNSCPKEKPPGSPRTFSTVPYPRTSSLCAKQDR 314


>ref|XP_003610975.1| Phosphatidylinositol 4-kinase type 2-beta [Medicago truncatula]
           gi|355512310|gb|AES93933.1| Phosphatidylinositol
           4-kinase type 2-beta [Medicago truncatula]
          Length = 725

 Score = 72.8 bits (177), Expect(2) = 2e-14
 Identities = 32/35 (91%), Positives = 32/35 (91%)
 Frame = +3

Query: 525 YGTKSPRTSRRSFFWAAVHRWISPIQPPIVFVTEI 629
           YGTK PRTSRR FFW AVHRWISPIQPPIVFVTEI
Sbjct: 673 YGTKGPRTSRRFFFWTAVHRWISPIQPPIVFVTEI 707



 Score = 32.0 bits (71), Expect(2) = 2e-14
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +1

Query: 361 TKFVPFRQVGKVGI*TTFA 417
           ++FVPFRQVGKVGI T F+
Sbjct: 620 SRFVPFRQVGKVGIRTHFS 638


>gb|AGC78981.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 120

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 42/74 (56%), Positives = 42/74 (56%)
 Frame = +3

Query: 408 HFCFALDSIGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGTKSPRTSRRSFFWAAVHRW 587
           HFCFALD IGT                            YGTK PRTSRR FFW AVHRW
Sbjct: 27  HFCFALDYIGTKQRRRRNGERTRAVLLGAKAAGSGVG--YGTKGPRTSRRFFFWTAVHRW 84

Query: 588 ISPIQPPIVFVTEI 629
           ISPIQPPIVFVTEI
Sbjct: 85  ISPIQPPIVFVTEI 98



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
 Frame = +1

Query: 331 LNPIHKPGNETKFVPFRQVGKVGI*T--TFALP*ILLEQSKERGG 459
           +NPIHKPGNETKFVPFRQVGKVGI T   FAL  I  +Q + R G
Sbjct: 1   MNPIHKPGNETKFVPFRQVGKVGIRTHFCFALDYIGTKQRRRRNG 45


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 43/79 (54%), Positives = 45/79 (56%)
 Frame = -3

Query: 562 KDRLEVRGLLVPYPAPKPAAFALSKTALALFLSPFRLFLCFVPIESKAKQKWFICLLYLL 383
           K+RLEVRG LVPYP  + AAFA SKTAL  FLSPFRL LCF                   
Sbjct: 97  KNRLEVRGPLVPYPTLELAAFAPSKTALVPFLSPFRLLLCF------------------- 137

Query: 382 DERERTLFRFRVYGLDSVS 326
                  FRFRVYGLDSVS
Sbjct: 138 -------FRFRVYGLDSVS 149


>emb|CBI23680.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 36/71 (50%), Positives = 36/71 (50%)
 Frame = +3

Query: 399 HMNHFCFALDSIGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGTKSPRTSRRSFFWAAV 578
           H N F FALDSIGT                            Y TK PRTSRR FFWAAV
Sbjct: 9   HTNQFSFALDSIGTKQRRRRNGERKGTRAVLLGTKAAGSRVRYSTKGPRTSRRFFFWAAV 68

Query: 579 HRWISPIQPPI 611
           HRWISPIQP I
Sbjct: 69  HRWISPIQPLI 79


>ref|YP_588303.1| hypothetical protein ZeamMp041 [Zea mays subsp. mays]
           gi|40795140|gb|AAR91184.1| hypothetical protein
           (mitochondrion) [Zea mays]
          Length = 99

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 41/78 (52%), Positives = 50/78 (64%)
 Frame = -3

Query: 628 ISVTKTIGGCIGEIQR*TAAQKKDRLEVRGLLVPYPAPKPAAFALSKTALALFLSPFRLF 449
           ISVTKTIGGCIGEIQ  TAAQKK+RLEVRG LVPY      A      +L+ F S + L 
Sbjct: 16  ISVTKTIGGCIGEIQGFTAAQKKNRLEVRGPLVPYRTSSLRAKRRPPLSLSFFHSAYFLA 75

Query: 448 LCFVPIESKAKQKWFICL 395
           L F   ++K+  K F+ +
Sbjct: 76  L-FRQSKAKSVTKIFLSI 92


>gb|ERP57876.1| hypothetical protein POPTR_0008s21690g, partial [Populus
           trichocarpa]
          Length = 207

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 32/66 (48%), Positives = 34/66 (51%)
 Frame = +3

Query: 405 NHFCFALDSIGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGTKSPRTSRRSFFWAAVHR 584
           NHFCFAL+SIGT                            Y TK PRTSRRSFFWA V+R
Sbjct: 1   NHFCFALNSIGTMQRKRRNGERKGVRAVLLGAKAAGSGAGYDTKGPRTSRRSFFWATVYR 60

Query: 585 WISPIQ 602
           WI PIQ
Sbjct: 61  WILPIQ 66


>gb|AFW86832.1| putative uncharacterized protein orf99-c [Zea mays]
          Length = 122

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 38/78 (48%), Positives = 48/78 (61%)
 Frame = -3

Query: 628 ISVTKTIGGCIGEIQR*TAAQKKDRLEVRGLLVPYPAPKPAAFALSKTALALFLSPFRLF 449
           I VTKTIGG IGEIQ  TAAQKK+RLEV+G LVPY      A      +L+ F S + L 
Sbjct: 39  ILVTKTIGGYIGEIQGFTAAQKKNRLEVQGPLVPYRTSSLRAKRRLPLSLSFFHSAYFLA 98

Query: 448 LCFVPIESKAKQKWFICL 395
           L F   ++K+  K F+ +
Sbjct: 99  L-FRQSKAKSVMKIFLSI 115


>gb|ABG37638.1| transposase [Populus trichocarpa]
          Length = 1450

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 30/43 (69%), Positives = 33/43 (76%)
 Frame = +3

Query: 222 RILQ*RKEPETRKGRLWKRSPVTKASRHNQKEGV*LTESNP*T 350
           R+LQ RK+PETR+GRLWKRSPVTKAS       V LTESNP T
Sbjct: 33  RLLQSRKQPETRRGRLWKRSPVTKASLLPFDYVVTLTESNPQT 75


Top