BLASTX nr result

ID: Jatropha_contig00025833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00025833
         (621 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007516878.1| hypothetical protein GlmaxMp29 (mitochondrio...    95   1e-17
ref|XP_003588269.1| Mitochondrial protein, putative [Medicago tr...    66   4e-13
emb|CAN80599.1| hypothetical protein VITISV_016761 [Vitis vinifera]    45   2e-07
emb|CAN67792.1| hypothetical protein VITISV_001313 [Vitis vinifera]    44   2e-07

>ref|YP_007516878.1| hypothetical protein GlmaxMp29 (mitochondrion) [Glycine max]
           gi|403311598|gb|AFR34346.1| hypothetical protein
           GlmaxMp29 (mitochondrion) [Glycine max]
          Length = 106

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 56/80 (70%), Positives = 60/80 (75%), Gaps = 8/80 (10%)
 Frame = +2

Query: 125 GLLK--LRHFSANQKDWSCWMLLSAA-----ITTKKLCVELQPLRVGHGATASDAPHHCE 283
           GLL+  LRHFSANQ +     LL  A     +TTKKLCVELQPLRVGHGATASDAPHHC 
Sbjct: 29  GLLEGYLRHFSANQPEGL--ELLDVAQCCYKLTTKKLCVELQPLRVGHGATASDAPHHCG 86

Query: 284 KRGLAHQPT-LPRGGRIATT 340
           +R LAHQPT LPR GR ATT
Sbjct: 87  RRRLAHQPTFLPRRGRSATT 106


>ref|XP_003588269.1| Mitochondrial protein, putative [Medicago truncatula]
           gi|355477317|gb|AES58520.1| Mitochondrial protein,
           putative [Medicago truncatula]
          Length = 172

 Score = 65.9 bits (159), Expect(2) = 4e-13
 Identities = 32/36 (88%), Positives = 32/36 (88%)
 Frame = -2

Query: 305 ADGQAPSFRNGVGRQRLLPRGQLEGAEVRRRAFWLL 198
           ADGQA S RNGVGRQRLLPR QLEGAEVRRRAFW L
Sbjct: 39  ADGQASSCRNGVGRQRLLPRRQLEGAEVRRRAFWFL 74



 Score = 34.7 bits (78), Expect(2) = 4e-13
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -3

Query: 208 FGCYSSTEQHPTAPVLLV 155
           F  YSSTEQHPTAPVLLV
Sbjct: 73  FLIYSSTEQHPTAPVLLV 90


>emb|CAN80599.1| hypothetical protein VITISV_016761 [Vitis vinifera]
          Length = 1404

 Score = 45.4 bits (106), Expect(2) = 2e-07
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +3

Query: 207  KSSASNFSPFELATGQQPLTPHTI 278
            KS A+N SPFELATGQQPLTPHT+
Sbjct: 1198 KSEATNKSPFELATGQQPLTPHTL 1221



 Score = 35.8 bits (81), Expect(2) = 2e-07
 Identities = 15/32 (46%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
 Frame = +1

Query: 289  GACPSAY-FAKRWQDRNDLAQTHLDKAARRIK 381
            G  P+A+ FAK W ++ D+A+++LDKAA+++K
Sbjct: 1227 GRSPAAFKFAKGWHEQADIARSYLDKAAKKMK 1258


>emb|CAN67792.1| hypothetical protein VITISV_001313 [Vitis vinifera]
          Length = 1414

 Score = 44.3 bits (103), Expect(2) = 2e-07
 Identities = 19/31 (61%), Positives = 26/31 (83%)
 Frame = +3

Query: 186  SVLL*QPKSSASNFSPFELATGQQPLTPHTI 278
            S+++   +S A+N SPFELATGQQP+TPHT+
Sbjct: 1181 SIIVAVDRSEATNKSPFELATGQQPVTPHTL 1211



 Score = 36.6 bits (83), Expect(2) = 2e-07
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
 Frame = +1

Query: 289  GACPSAY-FAKRWQDRNDLAQTHLDKAARRIKGATTLLGDNSKRSTKPSPTYLNNLKAWP 465
            G  P+ + FAK W ++ D+A+++LDKAA+++K       D  +R TK     +  +K  P
Sbjct: 1217 GRSPATFKFAKGWHEQADIARSYLDKAAKKMK----KWADKKRRHTKYKVGDMVLVKLLP 1272

Query: 466  GLKEEESRPCREA-DRRGSL*T*AIGSV-------------KTHPVFHVSQLTSIRPDR 600
              + +  RP  +   RR       +G V             K HPVFH S L     D+
Sbjct: 1273 -QQFKSLRPVHKGLVRRYEGPFPILGKVDKVSYRVELPPRLKIHPVFHASYLKPYHRDK 1330


Top