BLASTX nr result

ID: Jatropha_contig00025763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00025763
         (220 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    68   1e-09
gb|AGC78945.1| hypothetical protein (mitochondrion) [Vicia faba]       59   8e-07
ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...    59   8e-07

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 32/48 (66%), Positives = 33/48 (68%)
 Frame = +2

Query: 68  YAWFARFYHCRAQSYSKEEFDPGSEGTLAICLNTCKSNVVFGELGRKK 211
           YA F RFYHCRAQSYSKEEFDPGSEGTLAICL      +  G     K
Sbjct: 65  YARFTRFYHCRAQSYSKEEFDPGSEGTLAICLTHASRTLFSGSWAEGK 112


>gb|AGC78945.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 187

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 26/34 (76%), Positives = 27/34 (79%)
 Frame = -2

Query: 192 PKTTFDLHVFKHIASVPSEPGSNSSFEYDWALQW 91
           P+    L   KHIASVPSEPGSNSSFEYDWALQW
Sbjct: 154 PENNVRLACVKHIASVPSEPGSNSSFEYDWALQW 187


>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
            gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
            [Medicago truncatula]
          Length = 1116

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 26/34 (76%), Positives = 27/34 (79%)
 Frame = -2

Query: 192  PKTTFDLHVFKHIASVPSEPGSNSSFEYDWALQW 91
            P+    L   KHIASVPSEPGSNSSFEYDWALQW
Sbjct: 1083 PENNVRLACVKHIASVPSEPGSNSSFEYDWALQW 1116


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