BLASTX nr result

ID: Jatropha_contig00025351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00025351
         (315 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004234407.1| PREDICTED: 60S ribosomal protein L36-2-like ...    56   5e-06
ref|XP_004229955.1| PREDICTED: 60S ribosomal protein L36-2-like ...    56   5e-06
ref|XP_006353870.1| PREDICTED: 60S ribosomal protein L36-2-like ...    56   5e-06

>ref|XP_004234407.1| PREDICTED: 60S ribosomal protein L36-2-like [Solanum lycopersicum]
          Length = 108

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +2

Query: 2   THKRAKKKREEMSSVVRKMRGVGGGEKKK 88
           THKRAKKKREEMSSV+RKMR  GGGEKKK
Sbjct: 80  THKRAKKKREEMSSVLRKMRATGGGEKKK 108


>ref|XP_004229955.1| PREDICTED: 60S ribosomal protein L36-2-like [Solanum lycopersicum]
          Length = 110

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +2

Query: 2   THKRAKKKREEMSSVVRKMRGVGGGEKKK 88
           THKRAKKKREEMSSV+RKMR  GGGEKKK
Sbjct: 82  THKRAKKKREEMSSVLRKMRATGGGEKKK 110


>ref|XP_006353870.1| PREDICTED: 60S ribosomal protein L36-2-like isoform X1 [Solanum
           tuberosum] gi|565374652|ref|XP_006353871.1| PREDICTED:
           60S ribosomal protein L36-2-like isoform X2 [Solanum
           tuberosum] gi|413968432|gb|AFW90553.1| ribosomal protein
           L36 [Solanum tuberosum]
          Length = 108

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +2

Query: 2   THKRAKKKREEMSSVVRKMRGVGGGEKKK 88
           THKRAKKKREEMSSV+RKMR  GGGEKKK
Sbjct: 80  THKRAKKKREEMSSVLRKMRATGGGEKKK 108


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