BLASTX nr result

ID: Jatropha_contig00025266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00025266
         (304 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297976.1| inner membrane protein [Populus trichocarpa]...    68   1e-09
ref|XP_002304556.1| inner membrane protein [Populus trichocarpa]...    58   1e-06

>ref|XP_002297976.1| inner membrane protein [Populus trichocarpa]
           gi|222845234|gb|EEE82781.1| Inner membrane protein OXA1
           [Populus trichocarpa]
          Length = 459

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/58 (67%), Positives = 45/58 (77%)
 Frame = +3

Query: 123 AYIRSLSTRANLVRRQCQFSFSYILHHDDDRKRNSIDEGPLPLRGMSSSSLQQRGFAS 296
           AY+RSLSTRAN+VRR+   SFSYIL HDDDRK NSI+EGP   +GM S+  QQR F S
Sbjct: 2   AYVRSLSTRANIVRRRYNASFSYIL-HDDDRKHNSIEEGP-SSKGM-SNLFQQRSFGS 56


>ref|XP_002304556.1| inner membrane protein [Populus trichocarpa]
           gi|222841988|gb|EEE79535.1| Inner membrane protein OXA1
           [Populus trichocarpa]
          Length = 167

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/58 (60%), Positives = 42/58 (72%)
 Frame = +3

Query: 123 AYIRSLSTRANLVRRQCQFSFSYILHHDDDRKRNSIDEGPLPLRGMSSSSLQQRGFAS 296
           A + SLSTRAN+VRR+   SFSY+L  +DDRK NSIDEGP PL GM  +  QQ+ F S
Sbjct: 2   ACLFSLSTRANIVRRRYNASFSYVL--NDDRKHNSIDEGP-PLEGM-GNLFQQKPFGS 55


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