BLASTX nr result
ID: Jatropha_contig00025256
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Jatropha_contig00025256 (419 letters) Database: NCBI-nr (updated 2014/02/11) 35,149,712 sequences; 12,374,887,350 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316306.1| predicted protein [Populus trichocarpa] 85 1e-14 gb|ERP56532.1| RNA recognition motif-containing family protein [... 82 5e-14 ref|XP_002531981.1| Protein gar2, putative [Ricinus communis] gi... 74 1e-11 gb|EMJ20955.1| hypothetical protein PRUPE_ppa024384mg [Prunus pe... 63 3e-08 ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 60 4e-07 >ref|XP_002316306.1| predicted protein [Populus trichocarpa] Length = 442 Score = 84.7 bits (208), Expect = 1e-14 Identities = 52/90 (57%), Positives = 60/90 (66%), Gaps = 1/90 (1%) Frame = +1 Query: 13 MVLSNKKLKQKEREAKAQSL-AEIVXXXXXXXXXXXXXXPEGNSQLQELLEAAKQRIRLS 189 MVLSNKKLKQK R KA++L +++ PE NSQLQELLEAAKQR RLS Sbjct: 1 MVLSNKKLKQKLRAVKAEALVSKVSNGPERDSKNGSLGNPESNSQLQELLEAAKQRQRLS 60 Query: 190 KREKRRKTLSLQGLGSLEKSINEDNVEGNK 279 KRE+RRKT SLQG+ S KS DN E +K Sbjct: 61 KREQRRKTQSLQGIDSENKSQAGDNGEEDK 90 >gb|ERP56532.1| RNA recognition motif-containing family protein [Populus trichocarpa] Length = 439 Score = 82.4 bits (202), Expect = 5e-14 Identities = 53/92 (57%), Positives = 61/92 (66%), Gaps = 3/92 (3%) Frame = +1 Query: 13 MVLSNKKLKQKEREAKAQSL-AEIVXXXXXXXXXXXXXXPEGNSQLQELLEAAKQRIRLS 189 MVLSNKKLKQK R KA++L +++ PE NSQLQELLEAAKQR RLS Sbjct: 1 MVLSNKKLKQKLRAVKAEALVSKVSNGPERDSKNGSLGNPESNSQLQELLEAAKQRQRLS 60 Query: 190 KREKRRKTLSLQGLG--SLEKSINEDNVEGNK 279 KRE+RRKT SLQG+G S KS DN E +K Sbjct: 61 KREQRRKTQSLQGIGIDSENKSQAGDNGEEDK 92 >ref|XP_002531981.1| Protein gar2, putative [Ricinus communis] gi|223528378|gb|EEF30417.1| Protein gar2, putative [Ricinus communis] Length = 436 Score = 74.3 bits (181), Expect = 1e-11 Identities = 46/90 (51%), Positives = 56/90 (62%) Frame = +1 Query: 13 MVLSNKKLKQKEREAKAQSLAEIVXXXXXXXXXXXXXXPEGNSQLQELLEAAKQRIRLSK 192 MVLSNKKLKQK REA+A+ L E V EG +LQELLEAAKQ +LSK Sbjct: 1 MVLSNKKLKQKIREARAECLVETVSNGKGLTTNQ-----EGYPRLQELLEAAKQSSKLSK 55 Query: 193 REKRRKTLSLQGLGSLEKSINEDNVEGNKT 282 REK RK +LQGL + +K I +++ E T Sbjct: 56 REKGRKKQALQGLDNAQKRIRDNDQENKVT 85 >gb|EMJ20955.1| hypothetical protein PRUPE_ppa024384mg [Prunus persica] Length = 452 Score = 63.2 bits (152), Expect = 3e-08 Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 1/90 (1%) Frame = +1 Query: 13 MVLSNKKLKQKEREAKAQSLAEIVXXXXXXXXXXXXXXPEGNSQ-LQELLEAAKQRIRLS 189 MVLSN++LKQK RE AQSL E V P Q L+ LL++ Q+ RLS Sbjct: 1 MVLSNRRLKQKLRETLAQSLVESVAKTDPQTDGSENPDPNSEPQSLKVLLDSVTQKPRLS 60 Query: 190 KREKRRKTLSLQGLGSLEKSINEDNVEGNK 279 KREKRRK L+L+G ++ S N E NK Sbjct: 61 KREKRRKLLALRGSEAVSGSGTGGNFEENK 90 >ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera] gi|296086279|emb|CBI31720.3| unnamed protein product [Vitis vinifera] Length = 415 Score = 59.7 bits (143), Expect = 4e-07 Identities = 43/90 (47%), Positives = 49/90 (54%), Gaps = 2/90 (2%) Frame = +1 Query: 13 MVLSNKKLKQKEREAKAQSLA-EIVXXXXXXXXXXXXXXPEGNSQ-LQELLEAAKQRIRL 186 MVLSNKKLKQK R A A+SL + P+ N Q L+ LL +A Q RL Sbjct: 1 MVLSNKKLKQKLRAALAESLVVSVAGTTDPTTTDSTSTNPDPNPQSLENLLGSATQIPRL 60 Query: 187 SKREKRRKTLSLQGLGSLEKSINEDNVEGN 276 SKREKRRKTLSLQG S + E N Sbjct: 61 SKREKRRKTLSLQGPELAGTSNQSEEKEAN 90