BLASTX nr result

ID: Jatropha_contig00025256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00025256
         (419 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316306.1| predicted protein [Populus trichocarpa]            85   1e-14
gb|ERP56532.1| RNA recognition motif-containing family protein [...    82   5e-14
ref|XP_002531981.1| Protein gar2, putative [Ricinus communis] gi...    74   1e-11
gb|EMJ20955.1| hypothetical protein PRUPE_ppa024384mg [Prunus pe...    63   3e-08
ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...    60   4e-07

>ref|XP_002316306.1| predicted protein [Populus trichocarpa]
          Length = 442

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 52/90 (57%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
 Frame = +1

Query: 13  MVLSNKKLKQKEREAKAQSL-AEIVXXXXXXXXXXXXXXPEGNSQLQELLEAAKQRIRLS 189
           MVLSNKKLKQK R  KA++L +++               PE NSQLQELLEAAKQR RLS
Sbjct: 1   MVLSNKKLKQKLRAVKAEALVSKVSNGPERDSKNGSLGNPESNSQLQELLEAAKQRQRLS 60

Query: 190 KREKRRKTLSLQGLGSLEKSINEDNVEGNK 279
           KRE+RRKT SLQG+ S  KS   DN E +K
Sbjct: 61  KREQRRKTQSLQGIDSENKSQAGDNGEEDK 90


>gb|ERP56532.1| RNA recognition motif-containing family protein [Populus
           trichocarpa]
          Length = 439

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 53/92 (57%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
 Frame = +1

Query: 13  MVLSNKKLKQKEREAKAQSL-AEIVXXXXXXXXXXXXXXPEGNSQLQELLEAAKQRIRLS 189
           MVLSNKKLKQK R  KA++L +++               PE NSQLQELLEAAKQR RLS
Sbjct: 1   MVLSNKKLKQKLRAVKAEALVSKVSNGPERDSKNGSLGNPESNSQLQELLEAAKQRQRLS 60

Query: 190 KREKRRKTLSLQGLG--SLEKSINEDNVEGNK 279
           KRE+RRKT SLQG+G  S  KS   DN E +K
Sbjct: 61  KREQRRKTQSLQGIGIDSENKSQAGDNGEEDK 92


>ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
           gi|223528378|gb|EEF30417.1| Protein gar2, putative
           [Ricinus communis]
          Length = 436

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 46/90 (51%), Positives = 56/90 (62%)
 Frame = +1

Query: 13  MVLSNKKLKQKEREAKAQSLAEIVXXXXXXXXXXXXXXPEGNSQLQELLEAAKQRIRLSK 192
           MVLSNKKLKQK REA+A+ L E V               EG  +LQELLEAAKQ  +LSK
Sbjct: 1   MVLSNKKLKQKIREARAECLVETVSNGKGLTTNQ-----EGYPRLQELLEAAKQSSKLSK 55

Query: 193 REKRRKTLSLQGLGSLEKSINEDNVEGNKT 282
           REK RK  +LQGL + +K I +++ E   T
Sbjct: 56  REKGRKKQALQGLDNAQKRIRDNDQENKVT 85


>gb|EMJ20955.1| hypothetical protein PRUPE_ppa024384mg [Prunus persica]
          Length = 452

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
 Frame = +1

Query: 13  MVLSNKKLKQKEREAKAQSLAEIVXXXXXXXXXXXXXXPEGNSQ-LQELLEAAKQRIRLS 189
           MVLSN++LKQK RE  AQSL E V              P    Q L+ LL++  Q+ RLS
Sbjct: 1   MVLSNRRLKQKLRETLAQSLVESVAKTDPQTDGSENPDPNSEPQSLKVLLDSVTQKPRLS 60

Query: 190 KREKRRKTLSLQGLGSLEKSINEDNVEGNK 279
           KREKRRK L+L+G  ++  S    N E NK
Sbjct: 61  KREKRRKLLALRGSEAVSGSGTGGNFEENK 90


>ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|296086279|emb|CBI31720.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 43/90 (47%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
 Frame = +1

Query: 13  MVLSNKKLKQKEREAKAQSLA-EIVXXXXXXXXXXXXXXPEGNSQ-LQELLEAAKQRIRL 186
           MVLSNKKLKQK R A A+SL   +               P+ N Q L+ LL +A Q  RL
Sbjct: 1   MVLSNKKLKQKLRAALAESLVVSVAGTTDPTTTDSTSTNPDPNPQSLENLLGSATQIPRL 60

Query: 187 SKREKRRKTLSLQGLGSLEKSINEDNVEGN 276
           SKREKRRKTLSLQG      S   +  E N
Sbjct: 61  SKREKRRKTLSLQGPELAGTSNQSEEKEAN 90


Top