BLASTX nr result

ID: Jatropha_contig00025127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00025127
         (437 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    36   4e-08
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    34   2e-07
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              33   1e-06
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              33   1e-06
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              33   1e-06

>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 36.2 bits (82), Expect(3) = 4e-08
 Identities = 14/33 (42%), Positives = 24/33 (72%)
 Frame = +1

Query: 130 DLNEAFLLKLC*SLIHDRNTLWVQVLRSKYKLG 228
           D+N+A + K+   L+ D+ +LW +V+R KYK+G
Sbjct: 723 DMNKALVAKVGWRLLQDKESLWARVVRKKYKVG 755



 Score = 33.5 bits (75), Expect(3) = 4e-08
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +3

Query: 21  LKKSCHQFIWGSTVDNQKVSLVLWSRVQSPKMQVDLGFK 137
           L +    F+WGST++ +K  L+ W ++  PK +  +G +
Sbjct: 681 LDRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGIGLR 719



 Score = 32.3 bits (72), Expect(3) = 4e-08
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +2

Query: 323 EGMLWAVGNGLSVRFWIDNWI 385
           +G+ W  G+G ++RFW+D W+
Sbjct: 786 KGVGWVPGDGCTIRFWLDRWL 806


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 34.3 bits (77), Expect(3) = 2e-07
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +3

Query: 21  LKKSCHQFIWGSTVDNQKVSLVLWSRVQSPKMQVDLGFKR 140
           ++K    F+WG +   +K  LV W     PKM   LGFKR
Sbjct: 248 IEKIQRGFVWGDSNQGRKAHLVSWDVCCLPKMNGGLGFKR 287



 Score = 33.1 bits (74), Expect(3) = 2e-07
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +1

Query: 133 LNEAFLLKLC*SLIHDRNTLWVQVLRSKY 219
           +NEAFL+K+  +LI   + LW +VL SKY
Sbjct: 291 MNEAFLMKMLWNLIKQPDKLWCRVLYSKY 319



 Score = 32.3 bits (72), Expect(3) = 2e-07
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 329 MLWAVGNGLSVRFWIDNWIA 388
           ++W +G+G S  FW+D WI+
Sbjct: 353 VIWQIGDGRSTNFWLDKWIS 372


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 33.5 bits (75), Expect(3) = 1e-06
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 109  LKCRWTWDLNEAFLLKLC*SLIHDRNTLWVQVLRSKYKLGDEYI 240
            L  R   D N AFL K+   +  + + LWV+VLR KY    +++
Sbjct: 1389 LGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFL 1432



 Score = 33.1 bits (74), Expect(3) = 1e-06
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +3

Query: 21   LKKSCHQFIWGSTVDNQKVSLVLWSRVQSPKMQVDLGFK 137
            + K+C  F+WG   + +K+  V W+ +  P+ +  LG +
Sbjct: 1354 IDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLR 1392



 Score = 30.4 bits (67), Expect(3) = 1e-06
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 335  WAVGNGLSVRFWIDNWIAPG 394
            W VGNG  + FW D W+  G
Sbjct: 1460 WNVGNGRKINFWNDWWVGDG 1479


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 33.5 bits (75), Expect(3) = 1e-06
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 109 LKCRWTWDLNEAFLLKLC*SLIHDRNTLWVQVLRSKYKLGDEYI 240
           L  R   D N AFL K+   +  + + LWV+VLR KY    +++
Sbjct: 857 LGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFL 900



 Score = 33.1 bits (74), Expect(3) = 1e-06
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +3

Query: 21  LKKSCHQFIWGSTVDNQKVSLVLWSRVQSPKMQVDLGFK 137
           + K+C  F+WG   + +K+  V W+ +  P+ +  LG +
Sbjct: 822 IDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLR 860



 Score = 30.4 bits (67), Expect(3) = 1e-06
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 335 WAVGNGLSVRFWIDNWIAPG 394
           W VGNG  + FW D W+  G
Sbjct: 928 WNVGNGRKINFWNDWWVGDG 947


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 33.5 bits (75), Expect(3) = 1e-06
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 109 LKCRWTWDLNEAFLLKLC*SLIHDRNTLWVQVLRSKYKLGDEYI 240
           L  R   D N AFL K+   +  + + LWV+VLR KY    +++
Sbjct: 857 LGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFL 900



 Score = 33.1 bits (74), Expect(3) = 1e-06
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +3

Query: 21  LKKSCHQFIWGSTVDNQKVSLVLWSRVQSPKMQVDLGFK 137
           + K+C  F+WG   + +K+  V W+ +  P+ +  LG +
Sbjct: 822 IDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGLGLR 860



 Score = 30.4 bits (67), Expect(3) = 1e-06
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 335 WAVGNGLSVRFWIDNWIAPG 394
           W VGNG  + FW D W+  G
Sbjct: 928 WNVGNGRKINFWNDWWVGDG 947


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