BLASTX nr result

ID: Jatropha_contig00024972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00024972
         (167 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531771.1| Actin, macronuclear, putative [Ricinus commu...    65   7e-09
gb|EEE85393.2| Actin-related family protein [Populus trichocarpa]      59   8e-07
ref|XP_002300588.1| actin related protein [Populus trichocarpa]        59   8e-07

>ref|XP_002531771.1| Actin, macronuclear, putative [Ricinus communis]
           gi|223528607|gb|EEF30627.1| Actin, macronuclear,
           putative [Ricinus communis]
          Length = 455

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/54 (59%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
 Frame = +1

Query: 7   IEKVWESVSNRASSCSSPIIDSADRRSYS-VLSSLGDFDRIPLDVVMYILRLVG 165
           + KVWESVS+R+SSCSS   +SA++ SY+   +SLGDFDRIP+DV++ I++LVG
Sbjct: 5   LRKVWESVSHRSSSCSSSSTNSANQSSYTESTASLGDFDRIPIDVMLQIVKLVG 58


>gb|EEE85393.2| Actin-related family protein [Populus trichocarpa]
          Length = 473

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 34/55 (61%), Positives = 42/55 (76%), Gaps = 2/55 (3%)
 Frame = +1

Query: 7   IEKVWESVSNRASSCSSPIIDSADRR-SYSVLSS-LGDFDRIPLDVVMYILRLVG 165
           ++KVWESVSNRA+S SS  IDS     SY+  SS LG FDR+P+DVV+ I+RLVG
Sbjct: 5   LKKVWESVSNRATSFSSSSIDSVTTPLSYTESSSSLGAFDRLPIDVVLQIVRLVG 59


>ref|XP_002300588.1| actin related protein [Populus trichocarpa]
          Length = 473

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 34/55 (61%), Positives = 42/55 (76%), Gaps = 2/55 (3%)
 Frame = +1

Query: 7   IEKVWESVSNRASSCSSPIIDSADRR-SYSVLSS-LGDFDRIPLDVVMYILRLVG 165
           ++KVWESVSNRA+S SS  IDS     SY+  SS LG FDR+P+DVV+ I+RLVG
Sbjct: 5   LKKVWESVSNRATSFSSSSIDSVTTPLSYTESSSSLGAFDRLPIDVVLQIVRLVG 59


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