BLASTX nr result
ID: Jatropha_contig00024926
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00024926
(623 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808... 97 4e-18
gb|ESW33705.1| hypothetical protein PHAVU_001G091900g, partial [... 96 1e-17
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812... 96 1e-17
ref|XP_004499522.1| PREDICTED: enzymatic polyprotein-like [Cicer... 95 2e-17
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ... 86 1e-14
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]... 85 2e-14
ref|XP_004488259.1| PREDICTED: uncharacterized protein LOC101500... 81 3e-13
gb|ESQ37515.1| hypothetical protein EUTSA_v10003066mg [Eutrema s... 75 1e-11
ref|XP_006365576.1| PREDICTED: uncharacterized protein LOC102595... 72 1e-10
ref|XP_004517047.1| PREDICTED: uncharacterized protein LOC101507... 70 4e-10
gb|AAF79797.1|AC020646_20 T32E20.30 [Arabidopsis thaliana] 70 4e-10
dbj|BAG72154.1| hypothetical protein [Lotus japonicus] 69 1e-09
dbj|BAG72152.1| hypothetical protein [Lotus japonicus] 69 1e-09
dbj|BAG72151.1| hypothetical protein [Lotus japonicus] 69 1e-09
dbj|BAG72150.1| hypothetical protein [Lotus japonicus] 69 1e-09
dbj|BAG72148.1| hypothetical protein [Lotus japonicus] gi|208609... 69 1e-09
dbj|BAG72147.1| hypothetical protein [Lotus japonicus] gi|208609... 69 1e-09
gb|EMJ17505.1| hypothetical protein PRUPE_ppa019597mg, partial [... 66 8e-09
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 65 1e-08
gb|ABD78322.1| polyprotein [Primula vulgaris] 59 2e-08
>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
Length = 463
Score = 96.7 bits (239), Expect = 4e-18
Identities = 45/139 (32%), Positives = 80/139 (57%)
Frame = -3
Query: 459 VARVEQFFEIHHIQPDQRVSAALVAMVGAPLHWFLWIRQRNPQLTWEMLKSELTHQYGGD 280
+ RVE +F++ + RV A ++M G+ +HWF + + +L+WE LK L +YGG
Sbjct: 71 ITRVEIYFDVQNTTDKMRVKLARLSMEGSTIHWFNLLMETEDELSWEKLKRALIARYGGR 130
Query: 279 IANNPYEHLAAVKQTGSVAAFLDEFIARATQVPALSDCQYLGYFLNGXXXXXXXXXXXXD 100
NP+E L+ ++Q GSV F++ F ++QV L + QYLGYF++G +
Sbjct: 131 RLENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQIRRRVRTLN 190
Query: 99 TVDLYNAMKVSREIERELR 43
++ M++++++E EL+
Sbjct: 191 PLNRMQMMRIAKDVEEELK 209
>gb|ESW33705.1| hypothetical protein PHAVU_001G091900g, partial [Phaseolus
vulgaris]
Length = 293
Score = 95.5 bits (236), Expect = 1e-17
Identities = 47/149 (31%), Positives = 81/149 (54%)
Frame = -3
Query: 489 PVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHWFLWIRQRNPQLTWEMLK 310
PV W + R E +F++ + D RV + ++M G +HWF + + QL+WE LK
Sbjct: 139 PVAW------ITRAEIYFDVQNTPEDMRVKLSRLSMEGPTIHWFNLLMETEDQLSWEKLK 192
Query: 309 SELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVPALSDCQYLGYFLNGXXX 130
L +YGG NP+E L+ ++QTG V F++ F ++QV L + QYLGYF++G
Sbjct: 193 RALIARYGGRRLENPFEELSTLRQTGRVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKP 252
Query: 129 XXXXXXXXXDTVDLYNAMKVSREIERELR 43
+ + M++++++E E++
Sbjct: 253 PIRRRVRTLNPSNRMQMMRMAKDVEEEIK 281
>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
Length = 572
Score = 95.5 bits (236), Expect = 1e-17
Identities = 48/149 (32%), Positives = 81/149 (54%)
Frame = -3
Query: 489 PVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHWFLWIRQRNPQLTWEMLK 310
PV W + R E +F++ D RV A ++M G+ +HWF + + +L+WE LK
Sbjct: 84 PVAW------ITRAEIYFDVQDTSDDMRVKLARLSMEGSTIHWFNLLMETEDELSWENLK 137
Query: 309 SELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVPALSDCQYLGYFLNGXXX 130
L +YGG NP+E L+ ++Q GSV F++ F ++QV L + QYLGYF++G
Sbjct: 138 RALIARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKP 197
Query: 129 XXXXXXXXXDTVDLYNAMKVSREIERELR 43
+ + M++++++E EL+
Sbjct: 198 QIRRRVRTLNPRNRMEMMRIAKDVEDELK 226
>ref|XP_004499522.1| PREDICTED: enzymatic polyprotein-like [Cicer arietinum]
Length = 1006
Score = 94.7 bits (234), Expect = 2e-17
Identities = 49/157 (31%), Positives = 81/157 (51%)
Frame = -3
Query: 507 KNSDIPPVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHWFLWIRQRNPQL 328
K ++P + + R E +FE+ + +V A ++M GA +HWF +R+ L
Sbjct: 121 KKVELPSFDGDDHVAWITRAETYFEVQGTLEEVKVRLAKLSMEGATIHWFNLLRETKDNL 180
Query: 327 TWEMLKSELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVPALSDCQYLGYF 148
W LK L +YGG ++NP+E + ++QTG+V ++ F ++QV L + QYLGYF
Sbjct: 181 NWAKLKRALIERYGGRQSDNPFEEMKDLQQTGTVDEYITTFEYVSSQVARLPEEQYLGYF 240
Query: 147 LNGXXXXXXXXXXXXDTVDLYNAMKVSREIERELRSS 37
+ G + AMK++R++E EL S
Sbjct: 241 MGGLKNHIRLKVRTLNPQTRLQAMKIARDVETELHGS 277
>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 85.5 bits (210), Expect = 1e-14
Identities = 45/148 (30%), Positives = 76/148 (51%)
Frame = -3
Query: 489 PVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHWFLWIRQRNPQLTWEMLK 310
PV W + R E +F++ + D RV + ++M G +HWF + + L+ E LK
Sbjct: 757 PVAW------ITRAEIYFDVQNTPDDMRVKLSRLSMEGPTIHWFNLLMETEDDLSREKLK 810
Query: 309 SELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVPALSDCQYLGYFLNGXXX 130
L +Y G NP+E L+ ++Q GSV F++ F ++QV L + QYLGYF++G
Sbjct: 811 KALIARYDGRRLENPFEELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKA 870
Query: 129 XXXXXXXXXDTVDLYNAMKVSREIEREL 46
+ M++++++E EL
Sbjct: 871 HIRRRVRTLNPTTRMQMMRIAKDVEDEL 898
>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
[Medicago truncatula]
Length = 224
Score = 84.7 bits (208), Expect = 2e-14
Identities = 39/107 (36%), Positives = 65/107 (60%)
Frame = -3
Query: 459 VARVEQFFEIHHIQPDQRVSAALVAMVGAPLHWFLWIRQRNPQLTWEMLKSELTHQYGGD 280
+AR E +F + + P+ +V+ A + M G +H+F + + N LTWE LK L +YGG
Sbjct: 98 IARAEVYFNVQNTTPEIKVNLAQLCMDGPTIHFFKGLLEENETLTWEDLKDALLERYGGV 157
Query: 279 IANNPYEHLAAVKQTGSVAAFLDEFIARATQVPALSDCQYLGYFLNG 139
N +E L+A++Q G++ ++ +F Q+P L + QYLGYF++G
Sbjct: 158 SDGNVFEQLSALQQEGTIEEYIADFERLVAQLPKLPNDQYLGYFVHG 204
>ref|XP_004488259.1| PREDICTED: uncharacterized protein LOC101500384 [Cicer arietinum]
Length = 748
Score = 80.9 bits (198), Expect = 3e-13
Identities = 40/123 (32%), Positives = 68/123 (55%)
Frame = -3
Query: 507 KNSDIPPVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHWFLWIRQRNPQL 328
K ++P + +AR E +F + P+ +VS A + M G+ +H+F + + L
Sbjct: 92 KKIELPMFTGDDPAGWIARAEVYFRVQDTSPEIKVSLAQLCMEGSTIHFFKALVEDEIDL 151
Query: 327 TWEMLKSELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVPALSDCQYLGYF 148
TWE+ K L +YGG + +E L+++KQ GSV ++ EF QV L + Q++GYF
Sbjct: 152 TWEVFKDALLERYGGLGDGSVFEQLSSLKQEGSVEEYIKEFERLVAQVGRLPEAQFVGYF 211
Query: 147 LNG 139
++G
Sbjct: 212 IHG 214
>gb|ESQ37515.1| hypothetical protein EUTSA_v10003066mg [Eutrema salsugineum]
Length = 314
Score = 75.1 bits (183), Expect = 1e-11
Identities = 34/110 (30%), Positives = 62/110 (56%)
Frame = -3
Query: 498 DIPPVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHWFLWIRQRNPQLTWE 319
++P + + + V RVEQ+FE+ ++ ++++ ++ V L W+ W RQRNP +WE
Sbjct: 135 EVPLFDGSSAEQWVMRVEQYFELENLTEEEKLKVVWMSYVNEALMWYRWERQRNPFQSWE 194
Query: 318 MLKSELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVPALSD 169
++K + Q+ + + E L +KQ +V + EFIA A+ P LS+
Sbjct: 195 LMKYRVLEQFSSEHDTSAEERLLTLKQETTVKEYCREFIALASNAPELSE 244
>ref|XP_006365576.1| PREDICTED: uncharacterized protein LOC102595311 [Solanum tuberosum]
Length = 1907
Score = 72.0 bits (175), Expect = 1e-10
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
Frame = -3
Query: 453 RVEQFFEIHHIQPDQRVSAALVAMVGAPLHWFLWIRQRNPQLTWEMLKSELTHQYGGDIA 274
R E++F + I ++ AA V + G L+WF W R P +TW++ + + ++
Sbjct: 108 RAERYFHFNGIDDTDKLEAAAVCLEGRALNWFQWWETRTPVVTWDVFRVAILQRFTPSQL 167
Query: 273 NNPYEHLAAVKQTGSVAAFLDEFIARATQVPALSDCQYLGYFLNGXXXXXXXXXXXXDTV 94
N YE L ++QTGSVA + ++F + + + D +G F+NG
Sbjct: 168 GNLYEVLIGLQQTGSVAQYREDFELLSAPLKDVDDEVLVGIFINGLRGEIKAELRLSKLG 227
Query: 93 DLYNAMKVSREIERE---------LRSSP--LPKTSTSF 10
L M S+ IE + RS P LPK ST F
Sbjct: 228 TLTQIMDQSQRIEEKNWALSQVHLQRSMPITLPKVSTHF 266
>ref|XP_004517047.1| PREDICTED: uncharacterized protein LOC101507913, partial [Cicer
arietinum]
Length = 763
Score = 70.1 bits (170), Expect = 4e-10
Identities = 34/134 (25%), Positives = 67/134 (50%)
Frame = -3
Query: 540 HSQPFHQILTHKNSDIPPVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHW 361
HS+ H+ + +IP + R+E++F + + ++++ A ++A+ G L W
Sbjct: 60 HSEEVHRREKWRKLEIPIFAGEDAFGWTHRLERYFLLKEVTEEEKMQATVMALEGKALSW 119
Query: 360 FLWIRQRNPQLTWEMLKSELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVP 181
+ W + NP WE K + ++ + NP+E L ++KQTG+V ++++F +
Sbjct: 120 YHWWEKCNPNPNWEGFKIAVVRRFQPSMVQNPFEQLLSLKQTGTVDEYVEDFEKYVGAMR 179
Query: 180 ALSDCQYLGYFLNG 139
+ G FLNG
Sbjct: 180 TIDQEFVRGIFLNG 193
>gb|AAF79797.1|AC020646_20 T32E20.30 [Arabidopsis thaliana]
Length = 1397
Score = 70.1 bits (170), Expect = 4e-10
Identities = 44/151 (29%), Positives = 71/151 (47%)
Frame = -3
Query: 507 KNSDIPPVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHWFLWIRQRNPQL 328
KN ++P + +ARVE+FF ++++ V++ G L W+ W R +
Sbjct: 128 KNVEMPMFDGSGIYGWIARVERFFRSGGYNEAEQLALVSVSVSGEALSWYNWAISRGDFV 187
Query: 327 TWEMLKSELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVPALSDCQYLGYF 148
+W LKS L ++G P + L +KQTGSVA ++ F ++QV L D + G F
Sbjct: 188 SWLKLKSGLMLRFGNLKLRGPSQSLFCIKQTGSVAEYVQRFEDLSSQVGGLDDQKLEGIF 247
Query: 147 LNGXXXXXXXXXXXXDTVDLYNAMKVSREIE 55
LNG +L + V+R +E
Sbjct: 248 LNGLTGEMQELVHMHKPQNLPEMVAVARSME 278
>dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 68.9 bits (167), Expect = 1e-09
Identities = 37/134 (27%), Positives = 63/134 (47%)
Frame = -3
Query: 540 HSQPFHQILTHKNSDIPPVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHW 361
H + + +T + DIP N + V +VE+FF + ++ +++ ++AM L W
Sbjct: 95 HHRSHLRAVTGRRVDIPMFNGNDAYGWVTKVERFFRLSRVEEAEKIEMVMIAMEDRALGW 154
Query: 360 FLWIRQRNPQLTWEMLKSELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVP 181
F W ++ + WE K L ++ + NP+ L +VKQ GSV + + F A +
Sbjct: 155 FQWWEEQTLERAWEPFKQALFRRFQPALLQNPFGPLLSVKQKGSVMEYRENFELLAAPMR 214
Query: 180 ALSDCQYLGYFLNG 139
G FLNG
Sbjct: 215 NADREVLKGVFLNG 228
>dbj|BAG72152.1| hypothetical protein [Lotus japonicus]
Length = 1369
Score = 68.9 bits (167), Expect = 1e-09
Identities = 37/134 (27%), Positives = 63/134 (47%)
Frame = -3
Query: 540 HSQPFHQILTHKNSDIPPVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHW 361
H + + +T + DIP N + V +VE+FF + ++ +++ ++AM L W
Sbjct: 95 HHRSHLRAVTGRRVDIPMFNGNDAYGWVTKVERFFRLSRVEEAEKIEMVMIAMEDRALGW 154
Query: 360 FLWIRQRNPQLTWEMLKSELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVP 181
F W ++ + WE K L ++ + NP+ L +VKQ GSV + + F A +
Sbjct: 155 FQWWEEQTLERAWEPFKQALFRRFQPALLQNPFGPLLSVKQKGSVMEYRENFELLAAPMR 214
Query: 180 ALSDCQYLGYFLNG 139
G FLNG
Sbjct: 215 NADREVLKGVFLNG 228
>dbj|BAG72151.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 68.9 bits (167), Expect = 1e-09
Identities = 37/134 (27%), Positives = 63/134 (47%)
Frame = -3
Query: 540 HSQPFHQILTHKNSDIPPVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHW 361
H + + +T + DIP N + V +VE+FF + ++ +++ ++AM L W
Sbjct: 95 HHRSHLRAVTGRRVDIPMFNGNDAYGWVTKVERFFRLSRVEEAEKIEMVMIAMEDRALGW 154
Query: 360 FLWIRQRNPQLTWEMLKSELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVP 181
F W ++ + WE K L ++ + NP+ L +VKQ GSV + + F A +
Sbjct: 155 FQWWEEQTLERAWEPFKQALFRRFQPALLQNPFGPLLSVKQKGSVMEYRENFELLAAPMR 214
Query: 180 ALSDCQYLGYFLNG 139
G FLNG
Sbjct: 215 NADREVLKGVFLNG 228
>dbj|BAG72150.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 68.9 bits (167), Expect = 1e-09
Identities = 37/134 (27%), Positives = 63/134 (47%)
Frame = -3
Query: 540 HSQPFHQILTHKNSDIPPVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHW 361
H + + +T + DIP N + V +VE+FF + ++ +++ ++AM L W
Sbjct: 95 HHRSHLRAVTGRRVDIPMFNGNDAYGWVTKVERFFRLSRVEEAEKIEMVMIAMEDRALGW 154
Query: 360 FLWIRQRNPQLTWEMLKSELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVP 181
F W ++ + WE K L ++ + NP+ L +VKQ GSV + + F A +
Sbjct: 155 FQWWEEQTLERAWEPFKQALFRRFQPALLQNPFGPLLSVKQKGSVMEYRENFELLAAPMR 214
Query: 180 ALSDCQYLGYFLNG 139
G FLNG
Sbjct: 215 NADREVLKGVFLNG 228
>dbj|BAG72148.1| hypothetical protein [Lotus japonicus] gi|208609062|dbj|BAG72153.1|
hypothetical protein [Lotus japonicus]
Length = 1558
Score = 68.9 bits (167), Expect = 1e-09
Identities = 37/134 (27%), Positives = 63/134 (47%)
Frame = -3
Query: 540 HSQPFHQILTHKNSDIPPVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHW 361
H + + +T + DIP N + V +VE+FF + ++ +++ ++AM L W
Sbjct: 95 HHRSHLRAVTGRRVDIPMFNGNDAYGWVTKVERFFRLSRVEEAEKIEMVMIAMEDRALGW 154
Query: 360 FLWIRQRNPQLTWEMLKSELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVP 181
F W ++ + WE K L ++ + NP+ L +VKQ GSV + + F A +
Sbjct: 155 FQWWEEQTLERAWEPFKQALFRRFQPALLQNPFGPLLSVKQKGSVMEYRENFELLAAPMR 214
Query: 180 ALSDCQYLGYFLNG 139
G FLNG
Sbjct: 215 NADREVLKGVFLNG 228
>dbj|BAG72147.1| hypothetical protein [Lotus japonicus] gi|208609053|dbj|BAG72149.1|
hypothetical protein [Lotus japonicus]
Length = 1520
Score = 68.9 bits (167), Expect = 1e-09
Identities = 37/134 (27%), Positives = 63/134 (47%)
Frame = -3
Query: 540 HSQPFHQILTHKNSDIPPVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHW 361
H + + +T + DIP N + V +VE+FF + ++ +++ ++AM L W
Sbjct: 95 HHRSHLRAVTGRRVDIPMFNGNDAYGWVTKVERFFRLSRVEEAEKIEMVMIAMEDRALGW 154
Query: 360 FLWIRQRNPQLTWEMLKSELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVP 181
F W ++ + WE K L ++ + NP+ L +VKQ GSV + + F A +
Sbjct: 155 FQWWEEQTLERAWEPFKQALFRRFQPALLQNPFGPLLSVKQKGSVMEYKENFELLAAPMR 214
Query: 180 ALSDCQYLGYFLNG 139
G FLNG
Sbjct: 215 NADREVLKGVFLNG 228
>gb|EMJ17505.1| hypothetical protein PRUPE_ppa019597mg, partial [Prunus persica]
Length = 1392
Score = 65.9 bits (159), Expect = 8e-09
Identities = 42/149 (28%), Positives = 68/149 (45%)
Frame = -3
Query: 459 VARVEQFFEIHHIQPDQRVSAALVAMVGAPLHWFLWIRQRNPQLTWEMLKSELTHQYGGD 280
+A E+F + H ++ Q+V A + + G W W R P+ +W + L ++G
Sbjct: 99 LAMAERFLDYHEVEDHQKVMVAAMHLGGDAALWMKWFESRYPRDSWVVFSEMLLQRFGPG 158
Query: 279 IANNPYEHLAAVKQTGSVAAFLDEFIARATQVPALSDCQYLGYFLNGXXXXXXXXXXXXD 100
A N L+ KQTGSVA F+ FI + + +D Q LG F+ G +
Sbjct: 159 EALNVNMGLSHNKQTGSVAEFVGLFIKLSCRAVGWTDEQLLGTFVGGLKEDIQDDVIALE 218
Query: 99 TVDLYNAMKVSREIERELRSSPLPKTSTS 13
L AM++++ E +L+ KT S
Sbjct: 219 PHSLARAMELAQIFENKLKKKTGHKTFNS 247
>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
Length = 1631
Score = 65.5 bits (158), Expect = 1e-08
Identities = 40/163 (24%), Positives = 75/163 (46%)
Frame = -3
Query: 510 HKNSDIPPVPWNKSRRMVARVEQFFEIHHIQPDQRVSAALVAMVGAPLHWFLWIRQRNPQ 331
HK D+P + R E+FF + + +++ AA+VAM G L W+ W +R P
Sbjct: 174 HKKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEGDALRWYQWENKRRPF 233
Query: 330 LTWEMLKSELTHQYGGDIANNPYEHLAAVKQTGSVAAFLDEFIARATQVPALSDCQYLGY 151
WE +KS + Q+ + +E + QT SV + +F+ A + + + +G
Sbjct: 234 RNWESMKSFVLTQFRPLNVGSLHEQWLSTTQTASVWEYRRKFVETAAPLDGIPEEILMGK 293
Query: 150 FLNGXXXXXXXXXXXXDTVDLYNAMKVSREIERELRSSPLPKT 22
F++G + +L AM+++ ++E R + +T
Sbjct: 294 FIHGLNPELQSEIRVLNPYNLDQAMELALKLEERNRVNGARRT 336
>gb|ABD78322.1| polyprotein [Primula vulgaris]
Length = 1359
Score = 58.9 bits (141), Expect(2) = 2e-08
Identities = 35/148 (23%), Positives = 65/148 (43%)
Frame = -3
Query: 459 VARVEQFFEIHHIQPDQRVSAALVAMVGAPLHWFLWIRQRNPQLTWEMLKSELTHQYGGD 280
V + QFF ++ QR+ A + G PL W+ + + + +W+ L ++T ++G +
Sbjct: 36 VYKANQFFSLYQTPETQRIKIANLHFEGQPLVWYQNLEKSDLISSWDNLCDQMTKRFGEN 95
Query: 279 IANNPYEHLAAVKQTGSVAAFLDEFIARATQVPALSDCQYLGYFLNGXXXXXXXXXXXXD 100
+ NP + L +KQ SV + +F + +V LS+ L YF+ G
Sbjct: 96 LNENPLDQLIKLKQRNSVKEYKSDFEIISNRVKDLSEEHKLTYFICGLKEEIGLTVKMLF 155
Query: 99 TVDLYNAMKVSREIERELRSSPLPKTST 16
+ A +++ E +L P T
Sbjct: 156 PKSIETAFSIAKYQEEKLHLEKKPNFRT 183
Score = 25.8 bits (55), Expect(2) = 2e-08
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Frame = -1
Query: 536 HNLSTRFSPIKTQT----FPQFHGTNLVGWLPESN 444
+NL + + I +T FP+F+G N+V W+ ++N
Sbjct: 6 NNLDSDHNHINLRTIRLDFPKFYGENVVEWVYKAN 40