BLASTX nr result

ID: Jatropha_contig00024771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00024771
         (574 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006291838.1| orf49 gene product (mitochondrion) [Daucus c...   100   2e-19
emb|CBI23503.3| unnamed protein product [Vitis vinifera]               74   3e-11
gb|AGC78981.1| hypothetical protein (mitochondrion) [Vicia faba]       57   2e-06
gb|ABG37638.1| transposase [Populus trichocarpa]                       56   7e-06

>ref|YP_006291838.1| orf49 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081995|gb|AEY81187.1| orf49 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 161

 Score =  100 bits (250), Expect = 2e-19
 Identities = 62/105 (59%), Positives = 67/105 (63%), Gaps = 8/105 (7%)
 Frame = +2

Query: 11  FESNKVSSRGFIATFILKETEEPTFSQ*EPYFPLC---DLITSANQFLS*SPGGAHLWYF 181
           FESNKVSSRGFIATF+LKE+EEPTFSQ     P      L  SAN FLS        WYF
Sbjct: 54  FESNKVSSRGFIATFVLKESEEPTFSQIRALLPSLRPHHLNLSANPFLSHRAERTFGWYF 113

Query: 182 SRASSLIVTSF-----GATNTSMTERAGNSKGSPLEAFAGNQSVT 301
           SRA  LI  SF         TS+ + AGN +GSPLEAFAGNQSVT
Sbjct: 114 SRAGCLIAASFFRLVGRRKATSIYKTAGNLRGSPLEAFAGNQSVT 158


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 44/79 (55%), Positives = 46/79 (58%)
 Frame = -1

Query: 562 KDRLEVRGPLVPYPAPKPAAFAISKTALALFLSPFRLFLCFIPIESKAKQKWFICLLYLL 383
           K+RLEVRGPLVPYP  + AAFA SKTAL  FLSPFRL LCF                   
Sbjct: 97  KNRLEVRGPLVPYPTLELAAFAPSKTALVPFLSPFRLLLCF------------------- 137

Query: 382 DERERTLFRFRVYGLDSVS 326
                  FRFRVYGLDSVS
Sbjct: 138 -------FRFRVYGLDSVS 149


>gb|AGC78981.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 120

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 38/78 (48%), Positives = 41/78 (52%), Gaps = 16/78 (20%)
 Frame = +1

Query: 331 LNPIHKPGNETKFVPFRQVGKVGI*T--TFALP*ILLE*SKERGGME--------KGKGQ 480
           +NPIHKPGNETKFVPFRQVGKVGI T   FAL  I  +  + R G          K  G 
Sbjct: 1   MNPIHKPGNETKFVPFRQVGKVGIRTHFCFALDYIGTKQRRRRNGERTRAVLLGAKAAGS 60

Query: 481 GRSY------LSRRLLVW 516
           G  Y       SRR   W
Sbjct: 61  GVGYGTKGPRTSRRFFFW 78


>gb|ABG37638.1| transposase [Populus trichocarpa]
          Length = 1450

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 30/43 (69%), Positives = 33/43 (76%)
 Frame = +3

Query: 222 RILQ*RKEPETRKGRLWKRSPVTKASRHNQKEGV*LTESNP*T 350
           R+LQ RK+PETR+GRLWKRSPVTKAS       V LTESNP T
Sbjct: 33  RLLQSRKQPETRRGRLWKRSPVTKASLLPFDYVVTLTESNPQT 75


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