BLASTX nr result
ID: Jatropha_contig00024671
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00024671
(736 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24290.3| unnamed protein product [Vitis vinifera] 310 2e-91
ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li... 310 2e-91
gb|EOY19345.1| Replication factor C subunit 1 [Theobroma cacao] 308 3e-90
ref|XP_003540824.1| PREDICTED: replication factor C subunit 1-li... 300 8e-89
gb|EMJ00202.1| hypothetical protein PRUPE_ppa000922mg [Prunus pe... 296 2e-88
ref|XP_003527511.1| PREDICTED: replication factor C subunit 1-li... 300 5e-88
gb|EEE82965.2| hypothetical protein POPTR_0001s22140g [Populus t... 295 9e-88
ref|XP_002298161.1| predicted protein [Populus trichocarpa] 295 9e-88
gb|ESW04506.1| hypothetical protein PHAVU_011G100500g [Phaseolus... 295 3e-87
gb|ESR37295.1| hypothetical protein CICLE_v10027762mg [Citrus cl... 296 3e-87
ref|XP_003575946.1| PREDICTED: replication factor C subunit 1-li... 292 1e-85
gb|EPS67744.1| hypothetical protein M569_07025, partial [Genlise... 298 5e-85
dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sati... 287 2e-84
ref|NP_001068123.1| Os11g0572100 [Oryza sativa Japonica Group] g... 287 2e-84
gb|EEC68391.1| hypothetical protein OsI_36544 [Oryza sativa Indi... 287 2e-84
emb|CAC86668.1| replication factor C large subunit [Triticum sp.] 287 4e-84
ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana] gi... 291 6e-84
ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-li... 293 7e-84
ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-li... 293 7e-84
gb|ESQ42159.1| hypothetical protein EUTSA_v10012587mg [Eutrema s... 291 9e-84
>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
Length = 941
Score = 310 bits (795), Expect(2) = 2e-91
Identities = 160/215 (74%), Positives = 169/215 (78%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
ALN LQYMSLSMSVIKYDDVRQRLLSSAKDEDISPF AVDKLFGFNGGKLRMDERIDLSM
Sbjct: 550 ALNQLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFVAVDKLFGFNGGKLRMDERIDLSM 609
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPL+IQENYINY+P+ GKDDNG+KRM ++ARAAESI DGDIINVQIRRY+ WQL
Sbjct: 610 SDPDLVPLLIQENYINYRPTLAGKDDNGVKRMSLLARAAESIGDGDIINVQIRRYRQWQL 669
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ GS AS I PAALLHGQRETLEQGERNFNRFGGWLG+NSTMGKN AS
Sbjct: 670 SQAGSFASCITPAALLHGQRETLEQGERNFNRFGGWLGKNSTMGKNKRLLEDLHVHLLAS 729
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
RESN GR PKD+AV
Sbjct: 730 RESNSGRGTLRIDYLTLILKRLTDPLRMLPKDDAV 764
Score = 52.4 bits (124), Expect(2) = 2e-91
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQGH 733
++KVV+FM+ YSISQED DTIVELSKFQGH
Sbjct: 764 VQKVVEFMDLYSISQEDFDTIVELSKFQGH 793
>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
Length = 933
Score = 310 bits (795), Expect(2) = 2e-91
Identities = 160/215 (74%), Positives = 169/215 (78%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
ALN LQYMSLSMSVIKYDDVRQRLLSSAKDEDISPF AVDKLFGFNGGKLRMDERIDLSM
Sbjct: 542 ALNQLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFVAVDKLFGFNGGKLRMDERIDLSM 601
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPL+IQENYINY+P+ GKDDNG+KRM ++ARAAESI DGDIINVQIRRY+ WQL
Sbjct: 602 SDPDLVPLLIQENYINYRPTLAGKDDNGVKRMSLLARAAESIGDGDIINVQIRRYRQWQL 661
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ GS AS I PAALLHGQRETLEQGERNFNRFGGWLG+NSTMGKN AS
Sbjct: 662 SQAGSFASCITPAALLHGQRETLEQGERNFNRFGGWLGKNSTMGKNKRLLEDLHVHLLAS 721
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
RESN GR PKD+AV
Sbjct: 722 RESNSGRGTLRIDYLTLILKRLTDPLRMLPKDDAV 756
Score = 52.4 bits (124), Expect(2) = 2e-91
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQGH 733
++KVV+FM+ YSISQED DTIVELSKFQGH
Sbjct: 756 VQKVVEFMDLYSISQEDFDTIVELSKFQGH 785
>gb|EOY19345.1| Replication factor C subunit 1 [Theobroma cacao]
Length = 1012
Score = 308 bits (789), Expect(2) = 3e-90
Identities = 158/215 (73%), Positives = 171/215 (79%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
ALN LQYMSLSMSVIKYDD+RQRLLS +KDEDISPFTAVDKLFG GGKLRMD+RIDLSM
Sbjct: 566 ALNQLQYMSLSMSVIKYDDIRQRLLSGSKDEDISPFTAVDKLFGIYGGKLRMDQRIDLSM 625
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPL+IQENYINY+PSSIGKDD+GMKRM +IA+AAESI DGDIINVQIRRY+ WQL
Sbjct: 626 SDPDLVPLLIQENYINYRPSSIGKDDSGMKRMNLIAQAAESIGDGDIINVQIRRYRQWQL 685
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ GS++S IIPAALLHGQRETLEQGERNFNRFGGWLG+NSTM KN AS
Sbjct: 686 SQAGSLSSCIIPAALLHGQRETLEQGERNFNRFGGWLGKNSTMSKNYRLLEDLHVHILAS 745
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
RES+ GRE PKDEAV
Sbjct: 746 RESSSGRETLRLDYLTVLLTQLTNPLRDKPKDEAV 780
Score = 50.8 bits (120), Expect(2) = 3e-90
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQGHS 736
+++VV+FMN YSISQED DT+VELSKFQG S
Sbjct: 780 VKQVVEFMNAYSISQEDFDTVVELSKFQGQS 810
>ref|XP_003540824.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
Length = 1112
Score = 300 bits (769), Expect(2) = 8e-89
Identities = 152/215 (70%), Positives = 170/215 (79%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
ALN LQYMSLSMS+I YDD+RQR L++AKDEDISPFTAVDKLFGFN GKL+MDERI+LSM
Sbjct: 724 ALNQLQYMSLSMSIINYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERINLSM 783
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPLIIQENYINY+PS GKDD+G+KRM +IARAAESIADGDI+NVQIRRY+ WQL
Sbjct: 784 SDPDLVPLIIQENYINYRPSMAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQWQL 843
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQT S+A+SIIPA+LLHGQRE LEQGERNFNRFGGWLG+NSTMGKN AS
Sbjct: 844 SQTSSVATSIIPASLLHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLHVHILAS 903
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
RES+ GR+ PK EAV
Sbjct: 904 RESSSGRDTIRMEYLTLLLKQMTETLRTLPKAEAV 938
Score = 53.9 bits (128), Expect(2) = 8e-89
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 632 RMKLLEKVVDFMNTYSISQEDTDTIVELSKFQGH 733
+ + +++VV+FMNTYSISQED DTIVELSKF+GH
Sbjct: 934 KAEAVQQVVEFMNTYSISQEDFDTIVELSKFKGH 967
>gb|EMJ00202.1| hypothetical protein PRUPE_ppa000922mg [Prunus persica]
Length = 961
Score = 296 bits (759), Expect(2) = 2e-88
Identities = 152/215 (70%), Positives = 168/215 (78%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
A+N LQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFN GKLRMDER+DLSM
Sbjct: 571 AVNQLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNAGKLRMDERVDLSM 630
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPL+IQENYINY+PSS KDD+G+KRM +IA AAESI +GDI NVQIR+Y+ WQL
Sbjct: 631 SDPDLVPLLIQENYINYRPSSAVKDDSGIKRMNLIAHAAESIGNGDIFNVQIRKYRQWQL 690
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ+ ++SSI PAALL GQRETLEQGERNFNRFGGWLG+NST+GKN AS
Sbjct: 691 SQSACLSSSIFPAALLRGQRETLEQGERNFNRFGGWLGKNSTLGKNSRLLEDLHVHLLAS 750
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
RES+ GRE PKDEAV
Sbjct: 751 RESSSGRETLRVEYLSLLLKRLTVPLRELPKDEAV 785
Score = 56.2 bits (134), Expect(2) = 2e-88
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQGH 733
+ KVVDFMNTYSISQ+D DTIVELSKFQGH
Sbjct: 785 VHKVVDFMNTYSISQDDFDTIVELSKFQGH 814
>ref|XP_003527511.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
Length = 947
Score = 300 bits (768), Expect(2) = 5e-88
Identities = 153/215 (71%), Positives = 170/215 (79%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
ALN LQYMSLSMSVI YDD+RQR L++AKDEDISPFTAVDKLFGFN GKL+MDERI+LSM
Sbjct: 556 ALNQLQYMSLSMSVINYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERINLSM 615
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPLIIQENYINY+PS GKDD+G+KRM +IARAAESIADGDI+NVQIRRY+ WQL
Sbjct: 616 SDPDLVPLIIQENYINYRPSLAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQWQL 675
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQT S+A+SIIPA+LLHGQRE LEQGERNFNRFGGWLG+NSTMGKN AS
Sbjct: 676 SQTSSLATSIIPASLLHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLHVHILAS 735
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
RES+ GR+ PK EAV
Sbjct: 736 RESSSGRDTIRMEYLTLLLKEMTEPLRTLPKAEAV 770
Score = 51.6 bits (122), Expect(2) = 5e-88
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 632 RMKLLEKVVDFMNTYSISQEDTDTIVELSKFQGH 733
+ + +++VV+ MNTYSISQED DTIVELSKF+GH
Sbjct: 766 KAEAVQQVVELMNTYSISQEDFDTIVELSKFKGH 799
>gb|EEE82965.2| hypothetical protein POPTR_0001s22140g [Populus trichocarpa]
Length = 981
Score = 295 bits (754), Expect(2) = 9e-88
Identities = 160/227 (70%), Positives = 169/227 (74%), Gaps = 12/227 (5%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVD----------KLFGFNGGKL 150
ALN LQYMSLSMSVI YDDVRQRL SAKDEDISPFTAVD +LFGF+GGKL
Sbjct: 571 ALNQLQYMSLSMSVINYDDVRQRLQGSAKDEDISPFTAVDNMLLIVIFGVRLFGFSGGKL 630
Query: 151 RMDERIDLSMSDPDLVP--LIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDII 324
RMDERIDLSMSDPDL +I QENYINY+PSSIGKDDNGMKRM +IARAAESIADGDII
Sbjct: 631 RMDERIDLSMSDPDLEADSVIWQENYINYRPSSIGKDDNGMKRMSLIARAAESIADGDII 690
Query: 325 NVQIRRYQWWQLSQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXX 504
NVQIRRY+ WQLSQTGS++S IIPAALLHG RETLEQGERNFNRFGGWLG+NST GKN
Sbjct: 691 NVQIRRYRQWQLSQTGSLSSCIIPAALLHGSRETLEQGERNFNRFGGWLGKNSTAGKNSR 750
Query: 505 XXXXXXXXXXASRESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
ASRESN GRE PKDEAV
Sbjct: 751 LLEDLHVHLLASRESNMGRETLRLDYLTVLLKQLTDPLRVLPKDEAV 797
Score = 56.2 bits (134), Expect(2) = 9e-88
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQGH 733
+EKVV+FMN YSISQED DTIVELSKFQGH
Sbjct: 797 VEKVVEFMNVYSISQEDMDTIVELSKFQGH 826
>ref|XP_002298161.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 295 bits (754), Expect(2) = 9e-88
Identities = 160/227 (70%), Positives = 169/227 (74%), Gaps = 12/227 (5%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVD----------KLFGFNGGKL 150
ALN LQYMSLSMSVI YDDVRQRL SAKDEDISPFTAVD +LFGF+GGKL
Sbjct: 19 ALNQLQYMSLSMSVINYDDVRQRLQGSAKDEDISPFTAVDNMLLIVIFGVRLFGFSGGKL 78
Query: 151 RMDERIDLSMSDPDLVP--LIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDII 324
RMDERIDLSMSDPDL +I QENYINY+PSSIGKDDNGMKRM +IARAAESIADGDII
Sbjct: 79 RMDERIDLSMSDPDLEADSVIWQENYINYRPSSIGKDDNGMKRMSLIARAAESIADGDII 138
Query: 325 NVQIRRYQWWQLSQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXX 504
NVQIRRY+ WQLSQTGS++S IIPAALLHG RETLEQGERNFNRFGGWLG+NST GKN
Sbjct: 139 NVQIRRYRQWQLSQTGSLSSCIIPAALLHGSRETLEQGERNFNRFGGWLGKNSTAGKNSR 198
Query: 505 XXXXXXXXXXASRESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
ASRESN GRE PKDEAV
Sbjct: 199 LLEDLHVHLLASRESNMGRETLRLDYLTVLLKQLTDPLRVLPKDEAV 245
Score = 56.2 bits (134), Expect(2) = 9e-88
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQGH 733
+EKVV+FMN YSISQED DTIVELSKFQGH
Sbjct: 245 VEKVVEFMNVYSISQEDMDTIVELSKFQGH 274
>gb|ESW04506.1| hypothetical protein PHAVU_011G100500g [Phaseolus vulgaris]
Length = 938
Score = 295 bits (756), Expect(2) = 3e-87
Identities = 151/215 (70%), Positives = 166/215 (77%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
A+N LQYMSLSMSVI YDD+RQR L++AKDEDISPFTAVDKLFGFN GKLRMDERI+LSM
Sbjct: 554 AVNQLQYMSLSMSVINYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLRMDERINLSM 613
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPL+IQENYINYKPS GKDDNG+KRM +IARAAESIADGDI+NVQIRRY+ WQL
Sbjct: 614 SDPDLVPLLIQENYINYKPSLAGKDDNGIKRMNLIARAAESIADGDIVNVQIRRYRQWQL 673
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ A+ IIPA+LLHGQRE LEQGERNFNRFGGWLG+NSTMGKN AS
Sbjct: 674 SQASCTATCIIPASLLHGQREILEQGERNFNRFGGWLGKNSTMGKNFRLLDDLHVHILAS 733
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
RES+ GR+ PK EAV
Sbjct: 734 RESSSGRDTIRMEYLTLILKRLTEPLRTLPKAEAV 768
Score = 53.9 bits (128), Expect(2) = 3e-87
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 632 RMKLLEKVVDFMNTYSISQEDTDTIVELSKFQGH 733
+ + +++VV+FMNTYSISQED DTIVELSKF+GH
Sbjct: 764 KAEAVQQVVEFMNTYSISQEDFDTIVELSKFKGH 797
>gb|ESR37295.1| hypothetical protein CICLE_v10027762mg [Citrus clementina]
Length = 958
Score = 296 bits (757), Expect(2) = 3e-87
Identities = 153/215 (71%), Positives = 169/215 (78%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
A+N LQYMSLSMSVIKYDD+RQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM
Sbjct: 572 AINQLQYMSLSMSVIKYDDIRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 631
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPL+IQENYINY+PSS G+D+ +KR+ +IARAAESI+DGDI NVQIRR Q WQL
Sbjct: 632 SDPDLVPLLIQENYINYRPSSAGRDE--VKRLSLIARAAESISDGDIFNVQIRRNQQWQL 689
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ+ S+AS IIPAAL+HGQRETLEQGERNFNRFGGWLG+NSTMGKN AS
Sbjct: 690 SQSSSLASCIIPAALMHGQRETLEQGERNFNRFGGWLGKNSTMGKNLRLLEDLHFHHLAS 749
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
R+S GR+ PKD AV
Sbjct: 750 RKSKLGRDTLRLDYFSLLLKQLTEPLRVLPKDAAV 784
Score = 53.1 bits (126), Expect(2) = 3e-87
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQGHS 736
++KVV+FMN YSISQED D+IVELSKFQGH+
Sbjct: 784 VKKVVEFMNAYSISQEDFDSIVELSKFQGHA 814
>ref|XP_003575946.1| PREDICTED: replication factor C subunit 1-like [Brachypodium
distachyon]
Length = 1048
Score = 292 bits (748), Expect(2) = 1e-85
Identities = 147/215 (68%), Positives = 165/215 (76%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
ALNHLQYMSLS SV+KYDD+R RL SSAKDEDISPFTAVDKLFGFNGG+LRMDERIDLSM
Sbjct: 663 ALNHLQYMSLSQSVVKYDDIRLRLNSSAKDEDISPFTAVDKLFGFNGGRLRMDERIDLSM 722
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPLIIQENYINY+PS++GKDD+G+KRM +ARAAESIADGDI+NVQIRRY+ WQL
Sbjct: 723 SDPDLVPLIIQENYINYRPSAVGKDDSGVKRMNCLARAAESIADGDIVNVQIRRYRQWQL 782
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ +ASSI+PAAL+HG RET E GERNFNRFGGWLG+ ST KN AS
Sbjct: 783 SQAACLASSIVPAALMHGNRETFEAGERNFNRFGGWLGKYSTTNKNKRLLEDVHSHILAS 842
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
+++N RE PKDEAV
Sbjct: 843 QQANVDREALRLDYLTLLLRQLADPLKTMPKDEAV 877
Score = 51.6 bits (122), Expect(2) = 1e-85
Identities = 22/30 (73%), Positives = 29/30 (96%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQGH 733
++KVV+FM+TYS+SQED DT+VELSKF+GH
Sbjct: 877 VQKVVEFMDTYSLSQEDFDTLVELSKFKGH 906
>gb|EPS67744.1| hypothetical protein M569_07025, partial [Genlisea aurea]
Length = 888
Score = 298 bits (764), Expect(2) = 5e-85
Identities = 146/187 (78%), Positives = 164/187 (87%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
ALNHLQY+SLSMSVIK+DD++ RL SS+KDEDISPFTAVDKLFG+N GKLRMDERIDLSM
Sbjct: 563 ALNHLQYLSLSMSVIKFDDIKHRLQSSSKDEDISPFTAVDKLFGYNSGKLRMDERIDLSM 622
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPL+IQENYINY+PS KDDNG+KRM+++ARAAESI DGDI+NVQIRRYQ WQL
Sbjct: 623 SDPDLVPLLIQENYINYRPSIAVKDDNGLKRMELLARAAESIGDGDIVNVQIRRYQRWQL 682
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ GS++SSIIPAA LHGQRETLE+GERNFNRFGGWLG+NSTMGKN AS
Sbjct: 683 SQIGSLSSSIIPAAFLHGQRETLEEGERNFNRFGGWLGKNSTMGKNYRLLEDLHVHLLAS 742
Query: 541 RESNYGR 561
RES+ GR
Sbjct: 743 RESHLGR 749
Score = 43.1 bits (100), Expect(2) = 5e-85
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQGH 733
+ +VV+FM+ YSIS D DTI+ELS+F+GH
Sbjct: 777 VRRVVEFMDLYSISMSDLDTIMELSRFKGH 806
>dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sativa Japonica Group]
Length = 1021
Score = 287 bits (735), Expect(2) = 2e-84
Identities = 144/215 (66%), Positives = 163/215 (75%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
ALNHLQYMSLS SV+KYDD+RQRL SS KDEDISPFTAVDKLFGFNGG+LRMDERIDLSM
Sbjct: 634 ALNHLQYMSLSQSVVKYDDIRQRLNSSTKDEDISPFTAVDKLFGFNGGRLRMDERIDLSM 693
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPLIIQENYINY+P ++GKDD+G+KRM +ARAAESIAD DI+NVQIRRY+ WQL
Sbjct: 694 SDPDLVPLIIQENYINYRPITVGKDDSGVKRMNFLARAAESIADADIVNVQIRRYRQWQL 753
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ ++SSI+PAAL+HG RE LE GERNFNRFGGWLG+ ST KN AS
Sbjct: 754 SQAACLSSSIVPAALMHGNREILEAGERNFNRFGGWLGKYSTTNKNIRLLEDAHSHILAS 813
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
+++N RE PKDEAV
Sbjct: 814 QQANLDRESLRLDYLTLLLRQLTDPLKTMPKDEAV 848
Score = 52.4 bits (124), Expect(2) = 2e-84
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQGH 733
++KVV+FM+TYS+SQED DTIVELSKF+GH
Sbjct: 848 VQKVVEFMDTYSLSQEDFDTIVELSKFKGH 877
>ref|NP_001068123.1| Os11g0572100 [Oryza sativa Japonica Group]
gi|122248776|sp|Q2R2B4.2|RFC1_ORYSJ RecName:
Full=Replication factor C subunit 1; Short=OsRFC1;
AltName: Full=Activator 1 large subunit; AltName:
Full=Activator 1 subunit 1 gi|108864532|gb|ABA94349.2|
BRCA1 C Terminus domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113645345|dbj|BAF28486.1| Os11g0572100 [Oryza sativa
Japonica Group] gi|215697840|dbj|BAG92033.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1021
Score = 287 bits (735), Expect(2) = 2e-84
Identities = 144/215 (66%), Positives = 163/215 (75%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
ALNHLQYMSLS SV+KYDD+RQRL SS KDEDISPFTAVDKLFGFNGG+LRMDERIDLSM
Sbjct: 634 ALNHLQYMSLSQSVVKYDDIRQRLNSSTKDEDISPFTAVDKLFGFNGGRLRMDERIDLSM 693
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPLIIQENYINY+P ++GKDD+G+KRM +ARAAESIAD DI+NVQIRRY+ WQL
Sbjct: 694 SDPDLVPLIIQENYINYRPITVGKDDSGVKRMNFLARAAESIADADIVNVQIRRYRQWQL 753
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ ++SSI+PAAL+HG RE LE GERNFNRFGGWLG+ ST KN AS
Sbjct: 754 SQAACLSSSIVPAALMHGNREILEAGERNFNRFGGWLGKYSTTNKNIRLLEDAHSHILAS 813
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
+++N RE PKDEAV
Sbjct: 814 QQANLDRESLRLDYLTLLLRQLTDPLKTMPKDEAV 848
Score = 52.4 bits (124), Expect(2) = 2e-84
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQGH 733
++KVV+FM+TYS+SQED DTIVELSKF+GH
Sbjct: 848 VQKVVEFMDTYSLSQEDFDTIVELSKFKGH 877
>gb|EEC68391.1| hypothetical protein OsI_36544 [Oryza sativa Indica Group]
Length = 1014
Score = 287 bits (735), Expect(2) = 2e-84
Identities = 144/215 (66%), Positives = 163/215 (75%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
ALNHLQYMSLS SV+KYDD+RQRL SS KDEDISPFTAVDKLFGFNGG+LRMDERIDLSM
Sbjct: 627 ALNHLQYMSLSQSVVKYDDIRQRLNSSTKDEDISPFTAVDKLFGFNGGRLRMDERIDLSM 686
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPLIIQENYINY+P ++GKDD+G+KRM +ARAAESIAD DI+NVQIRRY+ WQL
Sbjct: 687 SDPDLVPLIIQENYINYRPITVGKDDSGVKRMNFLARAAESIADADIVNVQIRRYRQWQL 746
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ ++SSI+PAAL+HG RE LE GERNFNRFGGWLG+ ST KN AS
Sbjct: 747 SQAACLSSSIVPAALMHGNREILEAGERNFNRFGGWLGKYSTTNKNIRLLEDAHSHILAS 806
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
+++N RE PKDEAV
Sbjct: 807 QQANLDRESLRLDYLTLLLRQLTDPLKTMPKDEAV 841
Score = 52.4 bits (124), Expect(2) = 2e-84
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQGH 733
++KVV+FM+TYS+SQED DTIVELSKF+GH
Sbjct: 841 VQKVVEFMDTYSLSQEDFDTIVELSKFKGH 870
>emb|CAC86668.1| replication factor C large subunit [Triticum sp.]
Length = 543
Score = 287 bits (734), Expect(2) = 4e-84
Identities = 145/215 (67%), Positives = 164/215 (76%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
ALNHLQYMSLS SV+KYDD+R RL SS+KDEDISPFTAVDKLFGFNGG+LRMDERIDLSM
Sbjct: 156 ALNHLQYMSLSQSVVKYDDIRLRLNSSSKDEDISPFTAVDKLFGFNGGRLRMDERIDLSM 215
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPLIIQENYINY+PS+ GKDD+G+KRM +ARAAESIADGDI+NVQIRRY+ WQL
Sbjct: 216 SDPDLVPLIIQENYINYRPSAEGKDDSGVKRMNYLARAAESIADGDIVNVQIRRYRQWQL 275
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ +ASSI+PAAL+HG RE LE GERNFNRFGGWLG+ ST KN AS
Sbjct: 276 SQAACLASSIVPAALMHGNREVLEAGERNFNRFGGWLGKYSTTNKNKRLLEDVHSHILAS 335
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
+++N RE PK+EAV
Sbjct: 336 QQANLDREALRLDYLTLLLRQLTGPLKTMPKEEAV 370
Score = 51.6 bits (122), Expect(2) = 4e-84
Identities = 22/30 (73%), Positives = 29/30 (96%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQGH 733
++KVV+FM+TYS+SQED DT+VELSKF+GH
Sbjct: 370 VQKVVEFMDTYSLSQEDFDTLVELSKFKGH 399
>ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
gi|75168909|sp|Q9C587.1|RFC1_ARATH RecName:
Full=Replication factor C subunit 1; Short=AtRFC1;
AltName: Full=Activator 1 large subunit; AltName:
Full=Activator 1 subunit 1 gi|13374860|emb|CAC34494.1|
replication factor C large subunit-like protein
[Arabidopsis thaliana] gi|48958527|gb|AAT47816.1|
At5g22010 [Arabidopsis thaliana]
gi|332005585|gb|AED92968.1| replication factor C1
[Arabidopsis thaliana]
Length = 956
Score = 291 bits (745), Expect(2) = 6e-84
Identities = 153/217 (70%), Positives = 169/217 (77%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
A+N LQYMSLSMSVIKYDD+RQRLLSSAKDEDISPFTAVDKLFG+NGGKLRMDERIDLSM
Sbjct: 568 AVNQLQYMSLSMSVIKYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSM 627
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SDPDLVPL+IQENY+NY+PS GKD+ KRM ++ARAAESIADGDIINVQIRRY+ WQL
Sbjct: 628 SDPDLVPLLIQENYLNYRPS--GKDE--AKRMDLLARAAESIADGDIINVQIRRYRQWQL 683
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ+ +ASSI+PA+LLHG RE LEQGERNFNRFGGWLG+NST GKN AS
Sbjct: 684 SQSCCVASSILPASLLHGSREVLEQGERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLAS 743
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAVGE 651
RES+ GRE PKDEAV E
Sbjct: 744 RESSAGRETLRVDYLPLLLSRLTSPLQTLPKDEAVSE 780
Score = 47.0 bits (110), Expect(2) = 6e-84
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQG 730
+ +VVDFMN+YSISQED DTI+EL KF+G
Sbjct: 778 VSEVVDFMNSYSISQEDFDTILELGKFKG 806
>ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
Length = 981
Score = 293 bits (749), Expect(2) = 7e-84
Identities = 152/215 (70%), Positives = 166/215 (77%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
ALN LQY+SLSMSVIKYDD+RQRLLSS KDEDISPFTAVDKLFGFN GKLRMDERIDLSM
Sbjct: 578 ALNQLQYLSLSMSVIKYDDIRQRLLSSKKDEDISPFTAVDKLFGFNSGKLRMDERIDLSM 637
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SD DLVPL+IQENYINY+PS++ KDD G+KRM +IARAAESIADGDIINVQIRR++ WQL
Sbjct: 638 SDLDLVPLLIQENYINYRPSAVSKDDTGIKRMDLIARAAESIADGDIINVQIRRHRQWQL 697
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ+ +AS IIPA+LLHGQRETLEQ ERNFNRFG WLG+NST GKN AS
Sbjct: 698 SQSSCVASCIIPASLLHGQRETLEQYERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILAS 757
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
RES GRE PKDEAV
Sbjct: 758 RESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAV 792
Score = 45.1 bits (105), Expect(2) = 7e-84
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQG 730
++ VV+FM+ YSISQED DT++ELSKFQG
Sbjct: 792 VKTVVEFMSLYSISQEDFDTVLELSKFQG 820
>ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
Length = 942
Score = 293 bits (749), Expect(2) = 7e-84
Identities = 152/215 (70%), Positives = 166/215 (77%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
ALN LQY+SLSMSVIKYDD+RQRLLSS KDEDISPFTAVDKLFGFN GKLRMDERIDLSM
Sbjct: 552 ALNQLQYLSLSMSVIKYDDIRQRLLSSKKDEDISPFTAVDKLFGFNSGKLRMDERIDLSM 611
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SD DLVPL+IQENYINY+PS++ KDD G+KRM +IARAAESIADGDIINVQIRR++ WQL
Sbjct: 612 SDLDLVPLLIQENYINYRPSAVSKDDTGIKRMDLIARAAESIADGDIINVQIRRHRQWQL 671
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
SQ+ +AS IIPA+LLHGQRETLEQ ERNFNRFG WLG+NST GKN AS
Sbjct: 672 SQSSCVASCIIPASLLHGQRETLEQYERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILAS 731
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAV 645
RES GRE PKDEAV
Sbjct: 732 RESCSGREHLRVENLTLFLKRLTEPLHTLPKDEAV 766
Score = 45.1 bits (105), Expect(2) = 7e-84
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQG 730
++ VV+FM+ YSISQED DT++ELSKFQG
Sbjct: 766 VKTVVEFMSLYSISQEDFDTVLELSKFQG 794
>gb|ESQ42159.1| hypothetical protein EUTSA_v10012587mg [Eutrema salsugineum]
Length = 962
Score = 291 bits (745), Expect(2) = 9e-84
Identities = 151/217 (69%), Positives = 169/217 (77%)
Frame = +1
Query: 1 ALNHLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSM 180
ALN LQYMSLSMSVIKYDD+RQRLLSSAKDEDISPFTAVDKLFG+NGGKLRMDERIDLSM
Sbjct: 574 ALNQLQYMSLSMSVIKYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSM 633
Query: 181 SDPDLVPLIIQENYINYKPSSIGKDDNGMKRMKMIARAAESIADGDIINVQIRRYQWWQL 360
SD DLVPL++QENY+NY+PSS GKD+ KRM+++ARAAESIADGDIINVQIRR++ WQL
Sbjct: 634 SDFDLVPLLVQENYLNYRPSSTGKDE--AKRMELLARAAESIADGDIINVQIRRHRQWQL 691
Query: 361 SQTGSIASSIIPAALLHGQRETLEQGERNFNRFGGWLGRNSTMGKNXXXXXXXXXXXXAS 540
S + +ASSI+PA+LLHG RE LEQGERNFNRFGGWLG+NST GKN AS
Sbjct: 692 SLSSCVASSILPASLLHGSREVLEQGERNFNRFGGWLGKNSTAGKNTRLLEDLHVHVLAS 751
Query: 541 RESNYGREXXXXXXXXXXXXXXXXXXXXXPKDEAVGE 651
RES+ GRE PKDEAV E
Sbjct: 752 RESSSGRETIRVDYLPLLLNRLTSPLQTLPKDEAVSE 788
Score = 46.2 bits (108), Expect(2) = 9e-84
Identities = 20/31 (64%), Positives = 28/31 (90%)
Frame = +2
Query: 644 LEKVVDFMNTYSISQEDTDTIVELSKFQGHS 736
+ +VV+FMN+YSISQED DTI+EL+KF+G +
Sbjct: 786 VSEVVEFMNSYSISQEDFDTIMELAKFKGRA 816