BLASTX nr result

ID: Jatropha_contig00024534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00024534
         (280 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF03841.2| hypothetical protein POPTR_0017s04260g [Populus t...    79   6e-13
ref|XP_002310397.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>gb|EEF03841.2| hypothetical protein POPTR_0017s04260g [Populus trichocarpa]
          Length = 982

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
 Frame = +2

Query: 26  LESVSKQFVSTKXXXXXXXXXXXXXXXFWEIPAEARVGGEVNLASSGPPVLVTPSRHVLI 205
           +ES SKQFV  K               FWE+P   RV  E+NL SSGPPVLVTP+R VL+
Sbjct: 429 IESASKQFVPVKLPPPPPPPPPPR---FWEMPMGVRVTREMNLGSSGPPVLVTPTRSVLV 485

Query: 206 QS-AMPILGDEQLQTNASVERSEENL 280
           Q+ AMP+  +EQ+Q+  SVER+EE++
Sbjct: 486 QNHAMPVFANEQMQSKGSVERNEESM 511


>ref|XP_002310397.1| predicted protein [Populus trichocarpa] gi|222853300|gb|EEE90847.1|
           formin homology 2 domain-containing family protein
           [Populus trichocarpa]
          Length = 948

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 8/101 (7%)
 Frame = +2

Query: 2   SPERKSGFLE-------SVSKQFVSTKXXXXXXXXXXXXXXXFWEIPAEARVGGEVNLAS 160
           S ER SGF         SV KQFV  K               FWE+P   R+  EVNL  
Sbjct: 393 SQERNSGFSGQNEQVPVSVGKQFVPPKLPPPPPPPPPSR---FWEMPVGFRMAQEVNLGI 449

Query: 161 SGPPVLVTPSRHVLIQS-AMPILGDEQLQTNASVERSEENL 280
            GPPVLV P++ VL+Q  AMP++ +EQ+Q+N SVER+EE++
Sbjct: 450 PGPPVLVMPAKPVLVQDHAMPVMANEQMQSNGSVERNEESM 490


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