BLASTX nr result

ID: Jatropha_contig00024189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00024189
         (597 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006291838.1| orf49 gene product (mitochondrion) [Daucus c...    96   9e-18
emb|CBI23503.3| unnamed protein product [Vitis vinifera]               69   1e-09
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...    68   2e-09
emb|CBI23680.3| unnamed protein product [Vitis vinifera]               65   2e-08
gb|ERP57876.1| hypothetical protein POPTR_0008s21690g, partial [...    62   1e-07
ref|XP_003610975.1| Phosphatidylinositol 4-kinase type 2-beta [M...    52   1e-07
gb|AGC78981.1| hypothetical protein (mitochondrion) [Vicia faba]       58   2e-06

>ref|YP_006291838.1| orf49 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081995|gb|AEY81187.1| orf49 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 161

 Score = 95.5 bits (236), Expect = 9e-18
 Identities = 60/105 (57%), Positives = 65/105 (61%), Gaps = 8/105 (7%)
 Frame = +2

Query: 11  FESNKVSSRGIIATFILKETEEPTFSQ*EPYFPLC---DLITSANQFLS*SPGGAHLWYF 181
           FESNKVSSRG IATF+LKE+EEPTFSQ     P      L  SAN FLS        WYF
Sbjct: 54  FESNKVSSRGFIATFVLKESEEPTFSQIRALLPSLRPHHLNLSANPFLSHRAERTFGWYF 113

Query: 182 SRASSLIVTSF-----GATNTSMTERAGNSKG*PLEAFAGNQSVT 301
           SRA  LI  SF         TS+ + AGN +G PLEAFAGNQSVT
Sbjct: 114 SRAGCLIAASFFRLVGRRKATSIYKTAGNLRGSPLEAFAGNQSVT 158


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 43/79 (54%), Positives = 44/79 (55%)
 Frame = -3

Query: 562 KARLEVRGPLVLYPAPKPAAFALSKTALALFLSPFRLFLCFVPIESKAKQKWFICLLYLL 383
           K RLEVRGPLV YP  + AAFA SKTAL  FLSPFRL LCF                   
Sbjct: 97  KNRLEVRGPLVPYPTLELAAFAPSKTALVPFLSPFRLLLCF------------------- 137

Query: 382 DERERTLFRFRVYGLDSVS 326
                  FRFRVYGLDSVS
Sbjct: 138 -------FRFRVYGLDSVS 149


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 30/38 (78%), Positives = 31/38 (81%)
 Frame = -2

Query: 596 WGDPTVNSCPKESPPGSPRTFSIVPCPQTSSFRVKQDR 483
           W DPTVNSCPKE PPGSPRTFS VP P+TSS   KQDR
Sbjct: 277 WRDPTVNSCPKEKPPGSPRTFSTVPYPRTSSLCAKQDR 314


>emb|CBI23680.3| unnamed protein product [Vitis vinifera]
          Length = 107

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 33/66 (50%), Positives = 34/66 (51%)
 Frame = +3

Query: 399 HMNHFCFALDSIGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNTKGPRTSRRAFFWAAV 578
           H N F FALDSIGT                            Y+TKGPRTSRR FFWAAV
Sbjct: 9   HTNQFSFALDSIGTKQRRRRNGERKGTRAVLLGTKAAGSRVRYSTKGPRTSRRFFFWAAV 68

Query: 579 HRWISP 596
           HRWISP
Sbjct: 69  HRWISP 74


>gb|ERP57876.1| hypothetical protein POPTR_0008s21690g, partial [Populus
           trichocarpa]
          Length = 207

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 30/64 (46%), Positives = 34/64 (53%)
 Frame = +3

Query: 405 NHFCFALDSIGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNTKGPRTSRRAFFWAAVHR 584
           NHFCFAL+SIGT                            Y+TKGPRTSRR+FFWA V+R
Sbjct: 1   NHFCFALNSIGTMQRKRRNGERKGVRAVLLGAKAAGSGAGYDTKGPRTSRRSFFWATVYR 60

Query: 585 WISP 596
           WI P
Sbjct: 61  WILP 64


>ref|XP_003610975.1| Phosphatidylinositol 4-kinase type 2-beta [Medicago truncatula]
           gi|355512310|gb|AES93933.1| Phosphatidylinositol
           4-kinase type 2-beta [Medicago truncatula]
          Length = 725

 Score = 51.6 bits (122), Expect(2) = 1e-07
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = +3

Query: 525 YNTKGPRTSRRAFFWAAVHRWISP 596
           Y TKGPRTSRR FFW AVHRWISP
Sbjct: 673 YGTKGPRTSRRFFFWTAVHRWISP 696



 Score = 30.0 bits (66), Expect(2) = 1e-07
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +1

Query: 361 TKFVPFHQVGKVGI*TTFA 417
           ++FVPF QVGKVGI T F+
Sbjct: 620 SRFVPFRQVGKVGIRTHFS 638


>gb|AGC78981.1| hypothetical protein (mitochondrion) [Vicia faba]
          Length = 120

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 31/63 (49%), Positives = 31/63 (49%)
 Frame = +3

Query: 408 HFCFALDSIGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXYNTKGPRTSRRAFFWAAVHRW 587
           HFCFALD IGT                            Y TKGPRTSRR FFW AVHRW
Sbjct: 27  HFCFALDYIGTKQRRRRNGERTRAVLLGAKAAGSGVG--YGTKGPRTSRRFFFWTAVHRW 84

Query: 588 ISP 596
           ISP
Sbjct: 85  ISP 87



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 30/45 (66%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = +1

Query: 331 LNPIHKPGNETKFVPFHQVGKVGI*T--TFALP*ILLEQSKERGG 459
           +NPIHKPGNETKFVPF QVGKVGI T   FAL  I  +Q + R G
Sbjct: 1   MNPIHKPGNETKFVPFRQVGKVGIRTHFCFALDYIGTKQRRRRNG 45


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