BLASTX nr result

ID: Jatropha_contig00023415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00023415
         (368 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago ...   101   1e-19
ref|XP_003605642.1| hypothetical protein MTR_4g035260 [Medicago ...    74   3e-16
ref|XP_003606040.1| hypothetical protein MTR_4g051190 [Medicago ...    74   3e-16
ref|XP_003605618.1| Photosystem II reaction center protein M [Me...    55   1e-13
ref|XP_002888366.1| hypothetical protein ARALYDRAFT_894017 [Arab...    64   1e-08
ref|XP_002886862.1| hypothetical protein ARALYDRAFT_893969 [Arab...    64   1e-08
ref|NP_683579.1| uncharacterized protein [Arabidopsis thaliana] ...    63   4e-08
ref|NP_054927.1| hypothetical protein SpolCp017 [Spinacia olerac...    62   1e-07
gb|AFK48586.1| unknown [Medicago truncatula]                           59   8e-07

>ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago truncatula]
           gi|355518112|gb|AES99735.1| hypothetical protein
           MTR_5g084150 [Medicago truncatula]
          Length = 187

 Score =  101 bits (251), Expect = 1e-19
 Identities = 53/93 (56%), Positives = 56/93 (60%)
 Frame = -3

Query: 309 FRENKGVISFHGGSVNYWAELDLNQRRHIANEFTVRPH*PLGHRPRKNQFQTY**SMINF 130
           F+  K VIS HGGSVN+WAELDLNQRRHIANEFT                          
Sbjct: 5   FKNTKWVISLHGGSVNFWAELDLNQRRHIANEFT-------------------------- 38

Query: 129 LS*YPTPRGSRIPAASLKERCPEPLDDGGTFAR 31
              YPTPRGSRIP ASLKERCP+PLDDG  F R
Sbjct: 39  ---YPTPRGSRIPVASLKERCPKPLDDGDEFLR 68


>ref|XP_003605642.1| hypothetical protein MTR_4g035260 [Medicago truncatula]
           gi|355506697|gb|AES87839.1| hypothetical protein
           MTR_4g035260 [Medicago truncatula]
          Length = 142

 Score = 73.6 bits (179), Expect(2) = 3e-16
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = -3

Query: 120 YPTPRGSRIPAASLKERCPEPLDDGGTFARPPAYYAHS 7
           YPTPRGSRIP ASLKERCP+PLDDGG  ARPP YY H+
Sbjct: 105 YPTPRGSRIPVASLKERCPKPLDDGGILARPPFYYVHT 142



 Score = 37.0 bits (84), Expect(2) = 3e-16
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -2

Query: 298 QGGYIISWRISELLGRAGFEP 236
           Q GYII+W IS+ LGRAGFEP
Sbjct: 84  QMGYIIAWWISKFLGRAGFEP 104


>ref|XP_003606040.1| hypothetical protein MTR_4g051190 [Medicago truncatula]
           gi|355507095|gb|AES88237.1| hypothetical protein
           MTR_4g051190 [Medicago truncatula]
          Length = 96

 Score = 73.6 bits (179), Expect(2) = 3e-16
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = -3

Query: 120 YPTPRGSRIPAASLKERCPEPLDDGGTFARPPAYYAHS 7
           YPTPRGSRIP ASLKERCP+PLDDGG  ARPP YY H+
Sbjct: 59  YPTPRGSRIPVASLKERCPKPLDDGGILARPPFYYVHT 96



 Score = 37.0 bits (84), Expect(2) = 3e-16
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -2

Query: 298 QGGYIISWRISELLGRAGFEP 236
           Q GYII+W IS+ LGRAGFEP
Sbjct: 38  QMGYIIAWWISKFLGRAGFEP 58


>ref|XP_003605618.1| Photosystem II reaction center protein M [Medicago truncatula]
           gi|355506673|gb|AES87815.1| Photosystem II reaction
           center protein M [Medicago truncatula]
          Length = 164

 Score = 55.1 bits (131), Expect(2) = 1e-13
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +2

Query: 26  GGRANVPPSSSGSGHLSFKEAAGIRLPLG 112
           GGRA++PPSSSG GHLSFKEA GIRLPLG
Sbjct: 42  GGRASMPPSSSGLGHLSFKEATGIRLPLG 70



 Score = 46.2 bits (108), Expect(2) = 1e-13
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = +1

Query: 190 RLMGTDCKFVGNMSTLVQIQLGPII 264
           RLMGTDCKFVGNMSTLVQIQL  ++
Sbjct: 71  RLMGTDCKFVGNMSTLVQIQLVQLV 95


>ref|XP_002888366.1| hypothetical protein ARALYDRAFT_894017 [Arabidopsis lyrata subsp.
           lyrata] gi|297334207|gb|EFH64625.1| hypothetical protein
           ARALYDRAFT_894017 [Arabidopsis lyrata subsp. lyrata]
          Length = 57

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +3

Query: 21  MLAVGQMCPHRLVVQDISLSRRQRGFDFPWG 113
           M+AV Q+CPHRLVVQDISLSRRQRGFDFPWG
Sbjct: 27  MMAVEQVCPHRLVVQDISLSRRQRGFDFPWG 57


>ref|XP_002886862.1| hypothetical protein ARALYDRAFT_893969 [Arabidopsis lyrata subsp.
           lyrata] gi|297332703|gb|EFH63121.1| hypothetical protein
           ARALYDRAFT_893969 [Arabidopsis lyrata subsp. lyrata]
          Length = 63

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +3

Query: 21  MLAVGQMCPHRLVVQDISLSRRQRGFDFPWG 113
           M+AV Q+CPHRLVVQDISLSRRQRGFDFPWG
Sbjct: 33  MMAVEQVCPHRLVVQDISLSRRQRGFDFPWG 63


>ref|NP_683579.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332642848|gb|AEE76369.1| uncharacterized protein
           AT3G20362 [Arabidopsis thaliana]
          Length = 47

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = +3

Query: 21  MLAVGQMCPHRLVVQDISLSRRQRGFDFPWG 113
           M+AV Q+CPHRLVVQDISLSRRQ+GFDFPWG
Sbjct: 17  MMAVEQVCPHRLVVQDISLSRRQQGFDFPWG 47


>ref|NP_054927.1| hypothetical protein SpolCp017 [Spinacia oleracea]
           gi|7636100|emb|CAB88720.1| hypothetical protein
           [Spinacia oleracea]
          Length = 83

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/46 (73%), Positives = 36/46 (78%)
 Frame = +1

Query: 181 MPERLMGTDCKFVGNMSTLVQIQLGPIIH*SAMK*YNPLVLSKYLI 318
           MPERLMGTDCKFVGNMSTLVQIQLGPII  S ++     VL K LI
Sbjct: 1   MPERLMGTDCKFVGNMSTLVQIQLGPIISSSIIE-MKVFVLPKRLI 45


>gb|AFK48586.1| unknown [Medicago truncatula]
          Length = 29

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 27/29 (93%), Positives = 28/29 (96%)
 Frame = +1

Query: 181 MPERLMGTDCKFVGNMSTLVQIQLGPIIH 267
           MPERLMGTDCKFVGNMSTLVQIQLGP I+
Sbjct: 1   MPERLMGTDCKFVGNMSTLVQIQLGPKIY 29


Top