BLASTX nr result
ID: Jatropha_contig00022843
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00022843
(584 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABW98661.1| ribosomal protein S13 [Malus domestica] 72 8e-11
ref|YP_008802501.1| ribosomal protein S13 (mitochondrion) [Ascle... 70 4e-10
gb|AAN63489.1|AF315225_1 ribosomal protein S13 [Narcissus pseudo... 70 5e-10
gb|AAN63487.1|AF315223_1 ribosomal protein S13 [Amaryllis bellad... 70 5e-10
ref|YP_003587259.1| ribosomal protein S13 [Citrullus lanatus] gi... 69 6e-10
ref|YP_003587349.1| ribosomal protein S13 [Cucurbita pepo] gi|25... 69 8e-10
dbj|BAD83467.2| ribosomal protein S13 (mitochondrion) [Nicotiana... 69 1e-09
emb|CAA89893.1| ribosomal protein S13 [Magnolia x soulangeana] 68 1e-09
gb|AAN63488.1|AF315224_1 ribosomal protein S13 [Clivia miniata] 67 2e-09
ref|NP_064014.2| rps13 gene product (mitochondrion) [Beta vulgar... 67 2e-09
ref|YP_588375.1| ribosomal protein S13 [Zea mays subsp. mays] gi... 67 2e-09
sp|P23209.1|RT13_DAUCA RecName: Full=Ribosomal protein S13, mito... 67 4e-09
ref|YP_004237265.1| ribosomal protein S13 (mitochondrion) [Ricin... 65 9e-09
gb|AAN63492.1|AF315228_1 ribosomal protein S13 [Alstroemeria hyb... 65 1e-08
emb|CAD92013.1| mitochondrial ribosomal protein RPS13 [Burchardi... 65 1e-08
ref|YP_002000577.1| ribosomal protein S13 [Oryza sativa Japonica... 65 1e-08
emb|CAD19554.1| ribosomal protein S13 [Xerophyllum tenax] 65 1e-08
dbj|BAA11126.1| ribosomal protein S13 [Beta vulgaris subsp. vulg... 65 1e-08
dbj|BAD66720.1| ribosomal protein S13 [Beta vulgaris subsp. vulg... 65 1e-08
ref|YP_002608373.1| ribosomal protein S13 [Vitis vinifera] gi|20... 65 2e-08
>gb|ABW98661.1| ribosomal protein S13 [Malus domestica]
Length = 116
Score = 72.4 bits (176), Expect = 8e-11
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
MSYISGARLVADEQVRIALTK+DGIGPKKAIQVCYR
Sbjct: 1 MSYISGARLVADEQVRIALTKIDGIGPKKAIQVCYR 36
>ref|YP_008802501.1| ribosomal protein S13 (mitochondrion) [Asclepias syriaca]
gi|556562340|gb|AGZ63036.1| ribosomal protein S13
(mitochondrion) [Asclepias syriaca]
Length = 116
Score = 70.1 bits (170), Expect = 4e-10
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
M YISGARLVADEQVRIALTK+DGIGPKKAIQVCYR
Sbjct: 1 MLYISGARLVADEQVRIALTKIDGIGPKKAIQVCYR 36
>gb|AAN63489.1|AF315225_1 ribosomal protein S13 [Narcissus pseudonarcissus]
Length = 116
Score = 69.7 bits (169), Expect = 5e-10
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
M YISGARLV DEQVRIALTKMDGIGPKKAIQVCYR
Sbjct: 1 MLYISGARLVPDEQVRIALTKMDGIGPKKAIQVCYR 36
>gb|AAN63487.1|AF315223_1 ribosomal protein S13 [Amaryllis belladonna]
Length = 116
Score = 69.7 bits (169), Expect = 5e-10
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
M YISGARLV DEQVRIALTKMDGIGPKKAIQVCYR
Sbjct: 1 MLYISGARLVPDEQVRIALTKMDGIGPKKAIQVCYR 36
>ref|YP_003587259.1| ribosomal protein S13 [Citrullus lanatus]
gi|259156787|gb|ACV96649.1| ribosomal protein S13
[Citrullus lanatus]
Length = 116
Score = 69.3 bits (168), Expect = 6e-10
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
MSYISGAR VAD+QVRIALTK+DGIGPKKAIQVCYR
Sbjct: 1 MSYISGARFVADKQVRIALTKIDGIGPKKAIQVCYR 36
>ref|YP_003587349.1| ribosomal protein S13 [Cucurbita pepo] gi|259156831|gb|ACV96692.1|
ribosomal protein S13 [Cucurbita pepo]
Length = 116
Score = 68.9 bits (167), Expect = 8e-10
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
M YISGARLVAD+QVRIALTK+DGIGPKKAIQVCYR
Sbjct: 1 MPYISGARLVADKQVRIALTKIDGIGPKKAIQVCYR 36
>dbj|BAD83467.2| ribosomal protein S13 (mitochondrion) [Nicotiana tabacum]
Length = 116
Score = 68.6 bits (166), Expect = 1e-09
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
M YISGARLV DEQVRIALTK+DGIGPKKAIQVCYR
Sbjct: 1 MLYISGARLVGDEQVRIALTKIDGIGPKKAIQVCYR 36
>emb|CAA89893.1| ribosomal protein S13 [Magnolia x soulangeana]
Length = 116
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
M YISGARLV D+QVRIALTKMDGIGPKKAIQVCYR
Sbjct: 1 MLYISGARLVPDKQVRIALTKMDGIGPKKAIQVCYR 36
>gb|AAN63488.1|AF315224_1 ribosomal protein S13 [Clivia miniata]
Length = 116
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
M YISGA LV DEQVRIALTKMDGIGPKKAIQVCYR
Sbjct: 1 MLYISGASLVPDEQVRIALTKMDGIGPKKAIQVCYR 36
>ref|NP_064014.2| rps13 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435141|ref|YP_004222359.1| ribosomal protein S13
[Beta vulgaris subsp. maritima]
gi|346683232|ref|YP_004842164.1| ribosomal protein S13
[Beta macrocarpa] gi|87248054|gb|ABD36081.1| ribosomal
protein S13 [Beta vulgaris subsp. vulgaris]
gi|148491419|dbj|BAA99325.2| ribosomal protein S13 [Beta
vulgaris subsp. vulgaris] gi|317905591|emb|CBJ14001.1|
ribosomal protein S13 [Beta vulgaris subsp. maritima]
gi|319439874|emb|CBJ17577.1| ribosomal protein S13 [Beta
vulgaris subsp. maritima] gi|320148028|emb|CBJ20692.1|
ribosomal protein S13 [Beta vulgaris subsp. maritima]
gi|345500150|emb|CBX24969.1| ribosomal protein S13 [Beta
macrocarpa] gi|384977924|emb|CBL54148.1| ribosomal
protein S13 (mitochondrion) [Beta vulgaris subsp.
maritima]
Length = 116
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
MSYISGARLV D+QV+IALTK+DGIGPKKAIQVCYR
Sbjct: 1 MSYISGARLVDDKQVKIALTKIDGIGPKKAIQVCYR 36
>ref|YP_588375.1| ribosomal protein S13 [Zea mays subsp. mays]
gi|40795090|gb|AAR91134.1| ribosomal protein S13
(mitochondrion) [Zea mays]
Length = 116
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
M YISGARL+ DEQVRIALTKMDGIGPKKAIQ+CYR
Sbjct: 1 MLYISGARLLPDEQVRIALTKMDGIGPKKAIQLCYR 36
>sp|P23209.1|RT13_DAUCA RecName: Full=Ribosomal protein S13, mitochondrial
Length = 116
Score = 66.6 bits (161), Expect = 4e-09
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
M YISGARLVAD+QVRIALTKM GIGPKKAIQVCYR
Sbjct: 1 MLYISGARLVADKQVRIALTKMYGIGPKKAIQVCYR 36
>ref|YP_004237265.1| ribosomal protein S13 (mitochondrion) [Ricinus communis]
gi|322394272|gb|ADW96029.1| ribosomal protein S13
(mitochondrion) [Ricinus communis]
Length = 116
Score = 65.5 bits (158), Expect = 9e-09
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
MSYISGARLVADEQVRIA TK+DGIGPKKAIQV YR
Sbjct: 1 MSYISGARLVADEQVRIASTKIDGIGPKKAIQVRYR 36
>gb|AAN63492.1|AF315228_1 ribosomal protein S13 [Alstroemeria hybrid cultivar]
Length = 116
Score = 65.1 bits (157), Expect = 1e-08
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
MSYISGARLV DEQVRIA TKMDGIGPKKAIQV YR
Sbjct: 1 MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYR 36
>emb|CAD92013.1| mitochondrial ribosomal protein RPS13 [Burchardia rosea]
gi|76780568|emb|CAD92014.1| mitochondrial ribosomal
protein RPS13 [Uvularia perfoliata]
Length = 116
Score = 65.1 bits (157), Expect = 1e-08
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
MSYISGARLV DEQVRIA TKMDGIGPKKAIQV YR
Sbjct: 1 MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYR 36
>ref|YP_002000577.1| ribosomal protein S13 [Oryza sativa Japonica Group]
gi|60498746|dbj|BAC19882.2| Ribosomal protein S13 [Oryza
sativa Japonica Group]
Length = 116
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
M YI GARL+ DEQVRIALTKMDGIGPKKAIQ+CYR
Sbjct: 1 MLYILGARLLPDEQVRIALTKMDGIGPKKAIQLCYR 36
>emb|CAD19554.1| ribosomal protein S13 [Xerophyllum tenax]
Length = 116
Score = 65.1 bits (157), Expect = 1e-08
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
MSYISGARLV DEQVRIA TKMDGIGPKKAIQV YR
Sbjct: 1 MSYISGARLVPDEQVRIASTKMDGIGPKKAIQVRYR 36
>dbj|BAA11126.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris]
Length = 90
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
MSYISGARLV D+QV+IA TK+DGIGPKKAIQVCYR
Sbjct: 1 MSYISGARLVDDKQVKIASTKIDGIGPKKAIQVCYR 36
>dbj|BAD66720.1| ribosomal protein S13 [Beta vulgaris subsp. vulgaris]
gi|54606741|dbj|BAD66764.1| ribosomal protein S13 [Beta
vulgaris subsp. vulgaris]
Length = 116
Score = 65.1 bits (157), Expect = 1e-08
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
MSYISGARLV D+QV+IA TK+DGIGPKKAIQVCYR
Sbjct: 1 MSYISGARLVDDKQVKIASTKIDGIGPKKAIQVCYR 36
>ref|YP_002608373.1| ribosomal protein S13 [Vitis vinifera] gi|209954170|emb|CAQ77617.1|
ribosomal protein S13 [Vitis vinifera]
gi|239764761|gb|ACS15230.1| ribosomal protein S13 [Vitis
vinifera]
Length = 116
Score = 64.7 bits (156), Expect = 2e-08
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +1
Query: 475 MSYISGARLVADEQVRIALTKMDGIGPKKAIQVCYR 582
MSYISGAR VADEQVRIA TKMDGIGPKKAIQV YR
Sbjct: 1 MSYISGARSVADEQVRIASTKMDGIGPKKAIQVRYR 36