BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00022325
         (721 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP43917.1| integrase [Gossypium hirsutum]                         326   5e-87
gb|AAP43915.1| integrase [Gossypium herbaceum]                        321   2e-85
gb|AAP43918.1| integrase [Gossypium hirsutum]                         320   3e-85
gb|AAP43916.1| integrase [Gossypium herbaceum]                        309   5e-82
gb|EOY19685.1| DNA/RNA polymerases superfamily protein, putative...   305   1e-80
gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobrom...   305   1e-80
gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobrom...   304   2e-80
gb|EOY26510.1| DNA/RNA polymerases superfamily protein [Theobrom...   301   1e-79
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e...   288   1e-75
gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus pe...   287   3e-75
emb|CAA73042.1| polyprotein [Ananas comosus]                          287   3e-75
gb|ABA95101.1| retrotransposon protein, putative, Ty3-gypsy subc...   286   6e-75
emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]   285   8e-75
gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subc...   285   1e-74
gb|ABA94234.1| retrotransposon protein, putative, Ty3-gypsy subc...   283   3e-74
emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group] gi...   282   6e-74
gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subc...   282   6e-74
gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group...   282   6e-74
emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group]          282   8e-74
emb|CAE03019.3| OSJNBa0091D06.9 [Oryza sativa Japonica Group]         282   8e-74

>gb|AAP43917.1| integrase [Gossypium hirsutum]
          Length = 355

 Score =  326 bits (835), Expect = 5e-87
 Identities = 153/234 (65%), Positives = 185/234 (79%)
 Frame = +1

Query: 19  GCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLYTDHKSL 198
           GCVLMQEGKVVAYASRQLKPH+KNYPTHDLEL+A+VFALKIWRHYLYGEKC +YTDHKSL
Sbjct: 2   GCVLMQEGKVVAYASRQLKPHKKNYPTHDLELAAMVFALKIWRHYLYGEKCRVYTDHKSL 61

Query: 199 KYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKSLFALRAMNTRLSVAS 378
           KYL++QK+LNLRQRRWLELLKDY+  IDYHPGKANVVADAL+RK LFALR MNT+L ++ 
Sbjct: 62  KYLMSQKDLNLRQRRWLELLKDYELVIDYHPGKANVVADALNRKLLFALRVMNTQLKISD 121

Query: 379 NGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRKKRFMIKDDDCLYFGDQICVP 558
           +G+++AEL  RP  LQ+I +AQ++D+ +   +       +  F I  + CL F ++ICVP
Sbjct: 122 DGSILAELRARPMFLQEISEAQKNDQNLLAKRKQCEADTRSDFRIGSNGCLMFKNRICVP 181

Query: 559 KISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAMKRDITDYVFECLTC 720
           K  ELI+ IL EAHN   A+HP S KMY DLK  YWW   KRDI ++V +CL C
Sbjct: 182 KNDELIQKILHEAHNGCLAVHPGSTKMYNDLKKMYWWSGKKRDIFEFVSKCLVC 235


>gb|AAP43915.1| integrase [Gossypium herbaceum]
          Length = 350

 Score =  321 bits (822), Expect = 2e-85
 Identities = 156/230 (67%), Positives = 181/230 (78%)
 Frame = +1

Query: 31  MQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLYTDHKSLKYLL 210
           MQEG+VVAYASRQLKPHEKNYPTHDLEL+AIVFALKIWRHYL+GEKCH+Y+DHKSLKYL+
Sbjct: 1   MQEGRVVAYASRQLKPHEKNYPTHDLELAAIVFALKIWRHYLFGEKCHVYSDHKSLKYLM 60

Query: 211 TQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKSLFALRAMNTRLSVASNGAL 390
           TQ++LNLRQRRWLELLKDY+  IDYHPGKAN+VADALSRKSLFALRAMN  LS+  +  L
Sbjct: 61  TQRDLNLRQRRWLELLKDYELVIDYHPGKANMVADALSRKSLFALRAMNVYLSILPDNVL 120

Query: 391 VAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRKKRFMIKDDDCLYFGDQICVPKISE 570
           VAEL  +P L  QI +AQ+ DE +   +      ++  F I DDDCL F  ++CVPK SE
Sbjct: 121 VAELKAKPLLTHQIREAQKVDEELLAKRAECVLNKESEFQIDDDDCLRFRSRLCVPKNSE 180

Query: 571 LIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAMKRDITDYVFECLTC 720
           LI  IL EAH S  A+HP S KMY DLK ++WW  MKRDI D+V  CL C
Sbjct: 181 LILIILNEAHCSRMAIHPGSTKMYNDLKRRFWWHGMKRDIFDFVSRCLIC 230


>gb|AAP43918.1| integrase [Gossypium hirsutum]
          Length = 350

 Score =  320 bits (820), Expect = 3e-85
 Identities = 151/230 (65%), Positives = 181/230 (78%)
 Frame = +1

Query: 31  MQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLYTDHKSLKYLL 210
           MQEGKVVAYASRQLKPHEKNYPTHDLEL+A+VFALKIWRHYLYGEKC +YTDHKSLKYL+
Sbjct: 1   MQEGKVVAYASRQLKPHEKNYPTHDLELAAVVFALKIWRHYLYGEKCRVYTDHKSLKYLM 60

Query: 211 TQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKSLFALRAMNTRLSVASNGAL 390
           +QK+LNLRQRRWLELLKDY+  IDYHPGK NVV DALSR+ LFALR MNT+L ++ +G++
Sbjct: 61  SQKDLNLRQRRWLELLKDYELVIDYHPGKTNVVVDALSRRLLFALRVMNTQLKISDDGSI 120

Query: 391 VAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRKKRFMIKDDDCLYFGDQICVPKISE 570
           +AEL  R   LQ+I +AQ++D+ +   +          F I  D CL F +QICVPK  E
Sbjct: 121 LAELRARSMFLQEISEAQKNDQDLLAKRKQCEADMGSDFRIGSDGCLMFKNQICVPKNDE 180

Query: 571 LIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAMKRDITDYVFECLTC 720
           LI++IL EAHNS  A+HP S KMY DLK  YWW  MKRDI+++V +CL C
Sbjct: 181 LIQNILHEAHNSCLAVHPGSTKMYNDLKKMYWWSGMKRDISEFVSKCLVC 230


>gb|AAP43916.1| integrase [Gossypium herbaceum]
          Length = 353

 Score =  309 bits (792), Expect = 5e-82
 Identities = 146/229 (63%), Positives = 182/229 (79%)
 Frame = +1

Query: 34  QEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLYTDHKSLKYLLT 213
           QEGKVVAYASRQLKPHE NYPTHDLEL+A+VFALKIWRHY YGE+C +YTDHKSLKYLLT
Sbjct: 1   QEGKVVAYASRQLKPHEGNYPTHDLELAAVVFALKIWRHYWYGERCIIYTDHKSLKYLLT 60

Query: 214 QKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKSLFALRAMNTRLSVASNGALV 393
           QKELNLRQRRW+ELLKDYD +I+YHPGKANVVADALSR+++  LRAM  RLS+  +G+L+
Sbjct: 61  QKELNLRQRRWIELLKDYDCSIEYHPGKANVVADALSRRTVSDLRAMFARLSLYDDGSLL 120

Query: 394 AELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRKKRFMIKDDDCLYFGDQICVPKISEL 573
           AEL +RP  + QI + Q +DE++      V++G+   F +  D  L F  +ICVPK S+L
Sbjct: 121 AELQVRPTWVDQIKEKQLEDESLVTRFQQVKEGKTSEFGLNGDGVLCFRGRICVPKDSDL 180

Query: 574 IKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAMKRDITDYVFECLTC 720
            ++ILKEAH    AMHP  NK+Y DL+  YWWP +KR++T++V +CLTC
Sbjct: 181 RQTILKEAHGGLCAMHPGGNKLYHDLRELYWWPRLKREVTEFVGKCLTC 229


>gb|EOY19685.1| DNA/RNA polymerases superfamily protein, putative [Theobroma cacao]
          Length = 1347

 Score =  305 bits (780), Expect = 1e-80
 Identities = 145/254 (57%), Positives = 187/254 (73%), Gaps = 14/254 (5%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            AS  GLGCVLMQ+ KVVAYASRQLK HE NYPTHDLEL+A+VFALKIWRHYLYGE C ++
Sbjct: 733  ASKLGLGCVLMQDEKVVAYASRQLKRHEANYPTHDLELAAVVFALKIWRHYLYGEHCRIF 792

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKS--------- 333
            TDHKSLKYLLTQKELNLRQRRWLEL+KDYD  IDYHPGKANVVADALSRKS         
Sbjct: 793  TDHKSLKYLLTQKELNLRQRRWLELIKDYDLVIDYHPGKANVVADALSRKSSSSLAALQS 852

Query: 334  -----LFALRAMNTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRK 498
                 L  ++++  +L    +G+++A  ++RP+LL QI D QR D+ +      + DG  
Sbjct: 853  CYFSALIEMKSLGVQLRNGEDGSVLANFIVRPSLLNQIKDIQRSDDELRKEIQKLTDGGV 912

Query: 499  KRFMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAM 678
              F   +D+ L F D++CVP+ ++L ++I++EAH+S YA++P S KMY+ ++  YWWP M
Sbjct: 913  SEFRFGEDNVLMFRDRVCVPEGNQLRQTIMEEAHSSAYALNPGSTKMYRTIRENYWWPGM 972

Query: 679  KRDITDYVFECLTC 720
            KRD+ ++V +CL C
Sbjct: 973  KRDVAEFVAKCLVC 986


>gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1537

 Score =  305 bits (780), Expect = 1e-80
 Identities = 145/254 (57%), Positives = 185/254 (72%), Gaps = 14/254 (5%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            AS  GLGCVLMQ+ KV+AYASRQLK HE NYPTHDLEL+ +VFALKIWRHYLYGE+C ++
Sbjct: 892  ASKLGLGCVLMQDEKVIAYASRQLKKHETNYPTHDLELATVVFALKIWRHYLYGERCRIF 951

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKS--------- 333
             DHKSLKYLLTQKELNLRQR+WLEL+KDYD  IDYHP KANVVADALSRKS         
Sbjct: 952  YDHKSLKYLLTQKELNLRQRQWLELIKDYDLVIDYHPRKANVVADALSRKSSSSLATLRS 1011

Query: 334  -----LFALRAMNTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRK 498
                 L  ++++  +L+   +G L+A  ++RP+LL QI + Q+ D+ +      ++DG+ 
Sbjct: 1012 SYFSMLLEMKSLGIQLNNGEDGTLLASFVVRPSLLNQIRELQKSDDWLKQEVQKLQDGKA 1071

Query: 499  KRFMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAM 678
              F + DD  L   D+ICVPK  +L ++IL+EAH S YA+HP S KMY+ +K  YWWP M
Sbjct: 1072 SEFRLSDDGTLMLRDRICVPKDDQLRRAILEEAHYSAYALHPGSTKMYRTIKESYWWPGM 1131

Query: 679  KRDITDYVFECLTC 720
            +RDI ++V +CLTC
Sbjct: 1132 ERDIAEFVAKCLTC 1145


>gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1515

 Score =  304 bits (779), Expect = 2e-80
 Identities = 145/254 (57%), Positives = 186/254 (73%), Gaps = 14/254 (5%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            AS  GLGCVLMQ+ KVVAYASRQLK HE NYPTHDLEL+A+VFALKIWRHYLYGE C ++
Sbjct: 879  ASKLGLGCVLMQDEKVVAYASRQLKRHEANYPTHDLELAAVVFALKIWRHYLYGEHCRIF 938

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKS--------- 333
            TDHKSLKYLLTQKELNLRQRRWLEL+KDYD  IDYH GKANVVADALSRKS         
Sbjct: 939  TDHKSLKYLLTQKELNLRQRRWLELIKDYDLVIDYHLGKANVVADALSRKSSSSLAALQS 998

Query: 334  -----LFALRAMNTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRK 498
                 L  ++++  +L    +G+L+A  ++RP+LL QI D QR D+ +      + DG  
Sbjct: 999  CYFPALIEMKSLGVQLRNGEDGSLLANFIVRPSLLNQIKDIQRSDDELRKEIQKLTDGGV 1058

Query: 499  KRFMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAM 678
              F   +D+ L F D++CVP+ ++L ++I++EAH+S YA+HP S KMY+ ++  YWWP M
Sbjct: 1059 SEFRFGEDNVLMFKDRVCVPEGNQLRQAIMEEAHSSAYALHPGSTKMYRTIRENYWWPGM 1118

Query: 679  KRDITDYVFECLTC 720
            KRD+ +++ +CL C
Sbjct: 1119 KRDVAEFIAKCLVC 1132


>gb|EOY26510.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1290

 Score =  301 bits (772), Expect = 1e-79
 Identities = 144/250 (57%), Positives = 181/250 (72%), Gaps = 14/250 (5%)
 Frame = +1

Query: 13   GLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLYTDHK 192
            GLGCVLMQ+ KV+AYASRQL  HE NY THDLEL+A+VFALKIWRHYLYGE+C ++ DHK
Sbjct: 685  GLGCVLMQDEKVIAYASRQLMKHETNYLTHDLELAAVVFALKIWRHYLYGERCRIFFDHK 744

Query: 193  SLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKS------------- 333
            SLKYLLTQKELNLRQRRWLEL+KDYD  IDYHPGKANVV DALSRKS             
Sbjct: 745  SLKYLLTQKELNLRQRRWLELIKDYDLVIDYHPGKANVVTDALSRKSSSSLATLRSSYFP 804

Query: 334  -LFALRAMNTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRKKRFM 510
             L  ++++  +L+   +G L+A  ++RP+LL QI + Q+ D+ +      ++DG    F 
Sbjct: 805  MLLEMKSLGIQLNNGEDGTLLASFVVRPSLLNQIRELQKFDDWLKQEVQKLQDGEASEFR 864

Query: 511  IKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAMKRDI 690
            + DD  L   D+ICVPK  +L ++IL+EAH+S YA+HP S KMYQ +K  YWWP MKRDI
Sbjct: 865  LSDDGTLMLRDRICVPKDDQLRRAILEEAHSSAYALHPGSTKMYQTIKESYWWPGMKRDI 924

Query: 691  TDYVFECLTC 720
             ++V +CL C
Sbjct: 925  AEFVAKCLIC 934


>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1053

 Score =  288 bits (737), Expect = 1e-75
 Identities = 147/254 (57%), Positives = 179/254 (70%), Gaps = 14/254 (5%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            AS  GLGCVLMQEGKVVAYASRQL+PHE NYPTHDLEL+AIV ALKIWRHYL G +C ++
Sbjct: 426  ASRQGLGCVLMQEGKVVAYASRQLRPHEGNYPTHDLELAAIVHALKIWRHYLIGNRCEIF 485

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKSLF------- 339
            TDHKSLKY+ TQ ELNLRQRRWLEL+KDYD  I YHPGKANVVADALSRK+         
Sbjct: 486  TDHKSLKYIFTQSELNLRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNTILVQK 545

Query: 340  -------ALRAMNTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRK 498
                    L+ +N  L + + G + A L ++P L  QI + Q +DE I   K  +R G+ 
Sbjct: 546  NQPELYEELKHLN--LEIVNQGCVNA-LEVQPTLQSQIREKQLEDEDIKEIKKNMRRGKA 602

Query: 499  KRFMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAM 678
              F   +   ++FG++ICVP   EL +SILKEAH SPY++HP S KMYQDLK +YWW +M
Sbjct: 603  PGFSEDEQGTVWFGNRICVPNQQELKQSILKEAHESPYSIHPGSTKMYQDLKEKYWWVSM 662

Query: 679  KRDITDYVFECLTC 720
            KR+I ++V  C  C
Sbjct: 663  KREIAEFVAHCDIC 676


>gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus persica]
          Length = 1194

 Score =  287 bits (734), Expect = 3e-75
 Identities = 142/254 (55%), Positives = 176/254 (69%), Gaps = 14/254 (5%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            AS  GLGCVLMQ G+V+AYASRQLK HE NYP HDLEL+A+VFALKIWRHYLYGE C ++
Sbjct: 567  ASQQGLGCVLMQHGRVIAYASRQLKKHELNYPVHDLELAAVVFALKIWRHYLYGETCQIF 626

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKS--------- 333
            TDHKSLKYL TQKELNLRQRRWLEL+KDYD TI++HPG+ANVVADALSRKS         
Sbjct: 627  TDHKSLKYLFTQKELNLRQRRWLELIKDYDCTIEHHPGRANVVADALSRKSSGSIAYLRG 686

Query: 334  -----LFALRAMNTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRK 498
                 +  +R +   L V + GAL+A L +RP L+++I  AQ  D  I   +  V +G +
Sbjct: 687  RYLPLMVEMRKLRIGLDVDNQGALLATLHVRPVLVERILAAQSQDPLICTLRVEVANGDR 746

Query: 499  KRFMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAM 678
                +++D  L  G+++ VP    L + IL+EAH S +AMHP S KMY  L+  YWWP M
Sbjct: 747  TDCSVRNDGALMVGNRLYVPNDEALKREILEEAHESAFAMHPGSTKMYHTLREHYWWPFM 806

Query: 679  KRDITDYVFECLTC 720
            K+ I +YV  CL C
Sbjct: 807  KKQIAEYVRRCLIC 820


>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  287 bits (734), Expect = 3e-75
 Identities = 142/254 (55%), Positives = 177/254 (69%), Gaps = 14/254 (5%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            AS NGLGCVLMQ+ KV+AYASRQLK +EKNYPTHDLEL+A+VFALK+WRHYLYGE+C +Y
Sbjct: 319  ASLNGLGCVLMQDDKVIAYASRQLKEYEKNYPTHDLELAAVVFALKLWRHYLYGERCEVY 378

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKSLFAL----- 345
            TDHKSLKYL TQKELNLRQRRWLELLKDYD TI YHPGKANVVADALSRKS+  L     
Sbjct: 379  TDHKSLKYLFTQKELNLRQRRWLELLKDYDLTILYHPGKANVVADALSRKSMENLAMHVV 438

Query: 346  ---------RAMNTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRK 498
                     + +   +        +  L+++P LL +I + Q  D  +   K  + DG  
Sbjct: 439  TQPRLIEQMKRLELEIVTPDTPMRLMTLVVQPTLLDRIKEKQASDVELQKIKGKMVDGCT 498

Query: 499  KRFMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAM 678
              F +  D  + F  +ICVP  S + + IL+EAH +PYA+HP   KMY+DLK  YWWP +
Sbjct: 499  GDFTLDGDGLMRFRGRICVPADSGIKEDILQEAHRAPYAIHPGGTKMYKDLKLLYWWPGI 558

Query: 679  KRDITDYVFECLTC 720
            K+D+ ++V +CLTC
Sbjct: 559  KKDVGEFVAKCLTC 572


>gb|ABA95101.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1651

 Score =  286 bits (731), Expect = 6e-75
 Identities = 143/252 (56%), Positives = 174/252 (69%), Gaps = 12/252 (4%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            AS  GLGCVLMQ+ KVVAYASRQL+PHE NYPTHDLEL+A++ ALKIWRHYL G +C +Y
Sbjct: 1071 ASRQGLGCVLMQDRKVVAYASRQLRPHEVNYPTHDLELAAVIHALKIWRHYLIGNRCEIY 1130

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKSLFALRAM-- 354
            T+HKSLKY+ TQ ELN+RQRRWLEL+KDY+F I YHPGKANVVADALSRK   A   +  
Sbjct: 1131 TNHKSLKYIFTQSELNMRQRRWLELIKDYNFGIHYHPGKANVVADALSRKPYCATALVWP 1190

Query: 355  ----------NTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRKKR 504
                        +L+V   G L A L ++P L  QI +AQ DD  +   KD +R  R K 
Sbjct: 1191 TQDDLCREVEKLKLTVVPTGNL-ASLAVQPTLEAQIREAQSDDGIMKEMKDKIRKKRLKG 1249

Query: 505  FMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAMKR 684
            F I + D ++FG +ICVP   EL   IL+EAH S Y++HP S KMYQD+K  +WW  MKR
Sbjct: 1250 FTIDNQDTVWFGSRICVPAKKELKDLILREAHESAYSIHPGSTKMYQDIKGYFWWAGMKR 1309

Query: 685  DITDYVFECLTC 720
            D+ +YV  C  C
Sbjct: 1310 DVAEYVALCDIC 1321


>emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]
          Length = 984

 Score =  285 bits (730), Expect = 8e-75
 Identities = 136/254 (53%), Positives = 179/254 (70%), Gaps = 14/254 (5%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            ASH GLGCVLMQ G+VVAYASRQLKP+E+NYPTHD EL+ +VFALKIWRH+L+GE C ++
Sbjct: 361  ASHQGLGCVLMQHGRVVAYASRQLKPYERNYPTHDSELADVVFALKIWRHFLFGETCEIF 420

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKS--------- 333
            TDHKSLKYL +QK+LN+RQRRW+ELLKDYD+ I YH  KANVVADALSRKS         
Sbjct: 421  TDHKSLKYLFSQKKLNMRQRRWIELLKDYDYIIQYHSRKANVVADALSRKSVGSLTAIRG 480

Query: 334  -----LFALRAMNTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRK 498
                 L  LR++   + V  +GAL+A   ++P+L+ +I   Q++D  +    + V+ G K
Sbjct: 481  CQRQLLEDLRSLQVHMRVLDSGALIANFRVQPDLVGRIKALQKNDLNLVQLMEEVKKGSK 540

Query: 499  KRFMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAM 678
              F++ DD  L FG ++CVP   +L + +L+EAH S +A+HP   KMY+DL+  YWW  M
Sbjct: 541  LDFVLSDDGILRFGTRLCVPNDEDLRRELLEEAHCSKFAIHPERTKMYKDLRQNYWWSGM 600

Query: 679  KRDITDYVFECLTC 720
            K DI  +V +CL C
Sbjct: 601  KCDIAQFVAQCLVC 614


>gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1122

 Score =  285 bits (729), Expect = 1e-74
 Identities = 142/252 (56%), Positives = 175/252 (69%), Gaps = 12/252 (4%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            AS  GLGCVLMQ+ KVVAYASRQL+PHE NYPTHDLEL+A+V ALKIWRHYL G +C +Y
Sbjct: 604  ASRQGLGCVLMQDRKVVAYASRQLRPHEVNYPTHDLELAAVVHALKIWRHYLIGNRCEIY 663

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKSLFALRAM-- 354
            TDHKSLKY+ TQ ELN+RQRRWLEL+KDY+  I YHPGKAN+VADALSRK+  A   +  
Sbjct: 664  TDHKSLKYIFTQSELNMRQRRWLELIKDYNLGIHYHPGKANMVADALSRKTYCATALVWP 723

Query: 355  ----------NTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRKKR 504
                        +L++   G L A L ++P L  QI +AQ++DE +   K  +R  R K 
Sbjct: 724  TQDNLCREIEKLKLTMVPTGNL-ASLTVQPTLETQIREAQQEDEGMKEMKGKIRKKRLKG 782

Query: 505  FMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAMKR 684
            F I D D ++FG +ICVP   EL   IL+EAH S Y++HP S KMYQD+K  +WW  MKR
Sbjct: 783  FTIDDQDTVWFGSRICVPARKELKDLILREAHESAYSIHPGSTKMYQDIKEYFWWAGMKR 842

Query: 685  DITDYVFECLTC 720
            D+ +YV  C  C
Sbjct: 843  DVAEYVALCDIC 854


>gb|ABA94234.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1214

 Score =  283 bits (725), Expect = 3e-74
 Identities = 143/252 (56%), Positives = 175/252 (69%), Gaps = 12/252 (4%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            AS  GLGCVLMQE KVVAYASRQL+PHE NYPTHDLEL+A+V ALKIWRHYL G +C +Y
Sbjct: 611  ASRQGLGCVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVVHALKIWRHYLIGNRCEVY 670

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKSLFALRAM-- 354
            TDHKSLKY+ TQ ELN+RQRRWLEL+KDYD  I YHPGKANVVADALSRK+   +  +  
Sbjct: 671  TDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNVAQIRP 730

Query: 355  ----------NTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRKKR 504
                        RL+V  +G + A L ++P L  QI +AQ+DDE I      +++ +   
Sbjct: 731  DQDRLCRELEKLRLTVVQSG-VPASLTVQPTLESQIREAQKDDEGIKELIKRIQEKKDTN 789

Query: 505  FMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAMKR 684
            F I D   ++ G +ICVP   EL   ILKEAH S Y++HP S KMYQD+K+ +WW  MKR
Sbjct: 790  FSIDDQGTVWCGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKR 849

Query: 685  DITDYVFECLTC 720
            D+T+YV  C  C
Sbjct: 850  DVTEYVALCDIC 861


>emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group]
            gi|57834090|emb|CAE04759.2| OSJNBb0060E08.22 [Oryza
            sativa Japonica Group]
          Length = 1851

 Score =  282 bits (722), Expect = 6e-74
 Identities = 141/252 (55%), Positives = 174/252 (69%), Gaps = 12/252 (4%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            AS  GLGCVLMQE KVVAYASRQL+PHE NYPTHDLEL+A++ ALKIWRHYL G +C +Y
Sbjct: 1227 ASRQGLGCVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVIHALKIWRHYLIGNRCEVY 1286

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKSLFALRAM-- 354
            TDHKSLKY+ TQ ELN+RQRRWLEL+KDYD  I YHPGKANVVADALSRK+   +  +  
Sbjct: 1287 TDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNIAQIRP 1346

Query: 355  ----------NTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRKKR 504
                        RL+V  +G + A L ++P L  QI +AQ+DDE I      +++ +   
Sbjct: 1347 DQDHLCRELEKLRLTVVQSG-VPASLTVQPTLESQIREAQKDDEGIKELIKRIQEKKDTN 1405

Query: 505  FMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAMKR 684
            F I D   ++ G +ICVP   EL   ILKEAH S Y++HP S KMYQD+K+ +WW  MKR
Sbjct: 1406 FSIDDQGTIWCGPRICVPAKKELRNLILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKR 1465

Query: 685  DITDYVFECLTC 720
            D+ +YV  C  C
Sbjct: 1466 DVAEYVALCDIC 1477


>gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1759

 Score =  282 bits (722), Expect = 6e-74
 Identities = 145/255 (56%), Positives = 179/255 (70%), Gaps = 15/255 (5%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            AS  GLGCVLMQE KVVAYASRQL+PHE NYPTHDLEL+A+V ALKIWRHYL G +C +Y
Sbjct: 1135 ASRQGLGCVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVVHALKIWRHYLIGNRCEVY 1194

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKSLFALRAM-- 354
            TDHKSLKY+ TQ ELN+RQRRWLEL+KDYD  I YHPGKANVVADALSRK+   +  +  
Sbjct: 1195 TDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRKTYCNVDQIRP 1254

Query: 355  ----------NTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRKKR 504
                        RL+V  +G + A L ++P L  QI  AQ+DDE I   K+L++  ++K+
Sbjct: 1255 DQDRLCRDLEKLRLTVVQSG-VAASLTVQPTLESQIRKAQKDDEGI---KELIKRIQEKK 1310

Query: 505  ---FMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPA 675
               F I D   +++G +ICVP   EL   ILKEAH S Y++HP S KMYQD+K+ +WW  
Sbjct: 1311 DTDFSIDDQGTVWYGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMYQDIKAYFWWAG 1370

Query: 676  MKRDITDYVFECLTC 720
            MKRD+ +YV  C  C
Sbjct: 1371 MKRDVAEYVALCDIC 1385


>gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|55733908|gb|AAV59415.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1649

 Score =  282 bits (722), Expect = 6e-74
 Identities = 143/252 (56%), Positives = 174/252 (69%), Gaps = 12/252 (4%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            AS  GLGCVLMQE KVVAYASRQL+PHE NYPTHDLEL+A+V ALKIWRHYL G +C +Y
Sbjct: 1024 ASRQGLGCVLMQEQKVVAYASRQLRPHEANYPTHDLELAAVVHALKIWRHYLIGNRCEVY 1083

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKSLFALRAM-- 354
            TDHKSLKY+ TQ ELN+RQRRWLEL+KDYD  I YHPGKANVVADALSRK+   +  +  
Sbjct: 1084 TDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNVAQIRP 1143

Query: 355  ----------NTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRKKR 504
                        RL+V  +G + A L I+P L  QI +AQ+DDE I      +++ +   
Sbjct: 1144 DQDHLCRELEKLRLTVVQSG-VPASLTIQPTLESQIREAQKDDEGIKELIKRIQEKKDTN 1202

Query: 505  FMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAMKR 684
            F I D   ++ G +ICVP   EL   ILKEAH S Y++HP S KMYQD+K+ +WW  MKR
Sbjct: 1203 FSIDDQGTVWCGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKR 1262

Query: 685  DITDYVFECLTC 720
            D+ +YV  C  C
Sbjct: 1263 DVAEYVALCDIC 1274


>emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group]
          Length = 1851

 Score =  282 bits (721), Expect = 8e-74
 Identities = 142/252 (56%), Positives = 174/252 (69%), Gaps = 12/252 (4%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            AS  GLGCVLMQE KVVAYASRQL+PHE NYPTHDLEL+A+V ALKIWRHYL G +C +Y
Sbjct: 1227 ASRQGLGCVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVVHALKIWRHYLIGNRCEVY 1286

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKSLFALRAM-- 354
            TDHKSLKY+ TQ ELN+RQRRWLEL+KDYD  I YHPGKANVVADALSRK+   +  +  
Sbjct: 1287 TDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNIAQIRP 1346

Query: 355  ----------NTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRKKR 504
                        RL+V  +G + A L ++P L  QI +AQ+DDE I      +++ +   
Sbjct: 1347 DQDHLCRELEKLRLTVVQSG-VPASLTVQPTLESQIREAQKDDEGIKELIKRIQEKKDTN 1405

Query: 505  FMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAMKR 684
            F I D   ++ G +ICVP   EL   ILKEAH S Y++HP S KMYQD+K+ +WW  MKR
Sbjct: 1406 FSIDDQGTVWCGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKR 1465

Query: 685  DITDYVFECLTC 720
            D+ +YV  C  C
Sbjct: 1466 DVAEYVALCDIC 1477


>emb|CAE03019.3| OSJNBa0091D06.9 [Oryza sativa Japonica Group]
          Length = 1762

 Score =  282 bits (721), Expect = 8e-74
 Identities = 142/252 (56%), Positives = 174/252 (69%), Gaps = 12/252 (4%)
 Frame = +1

Query: 1    ASHNGLGCVLMQEGKVVAYASRQLKPHEKNYPTHDLELSAIVFALKIWRHYLYGEKCHLY 180
            AS  GLGCVLMQE KVVAYASRQL+PHE NYPTHDLEL+A+V ALKIWRHYL G +C +Y
Sbjct: 1138 ASRQGLGCVLMQERKVVAYASRQLRPHEANYPTHDLELAAVVHALKIWRHYLIGNRCEVY 1197

Query: 181  TDHKSLKYLLTQKELNLRQRRWLELLKDYDFTIDYHPGKANVVADALSRKSLFALRAM-- 354
            TDHKSLKY+ TQ ELN+RQRRWLEL+KDYD  I YHPGKANVVADALSRK+   +  +  
Sbjct: 1198 TDHKSLKYIFTQTELNMRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNVAQIRP 1257

Query: 355  ----------NTRLSVASNGALVAELMIRPNLLQQI*DAQRDDETIALWKDLVRDGRKKR 504
                        RL+V  +G + A L ++P L  QI +AQ+DDE I      +++ +   
Sbjct: 1258 DQDHLCRELEKLRLTVVQSG-VPASLTVQPTLESQIREAQKDDEGIKELIKRIQEKKDTN 1316

Query: 505  FMIKDDDCLYFGDQICVPKISELIKSILKEAHNSPYAMHPSSNKMYQDLKSQYWWPAMKR 684
            F I D   ++ G +ICVP   EL   ILKEAH S Y++HP S KMYQD+K+ +WW  MKR
Sbjct: 1317 FSIDDQGTVWCGPRICVPAKKELRDLILKEAHESAYSIHPGSTKMYQDIKAYFWWAGMKR 1376

Query: 685  DITDYVFECLTC 720
            D+ +YV  C  C
Sbjct: 1377 DVAEYVALCDIC 1388