BLASTX nr result

ID: Jatropha_contig00022234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00022234
         (167 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510825.1| conserved hypothetical protein [Ricinus comm...    68   1e-09
ref|XP_002322461.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-07
gb|EEE96450.2| hypothetical protein POPTR_0012s13350g [Populus t...    60   4e-07
ref|XP_002318230.1| predicted protein [Populus trichocarpa]            60   4e-07
gb|EOY23117.1| IQ-domain 24, putative [Theobroma cacao]                57   3e-06

>ref|XP_002510825.1| conserved hypothetical protein [Ricinus communis]
           gi|223549940|gb|EEF51427.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 473

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 7/59 (11%)
 Frame = +2

Query: 11  HVGLPSIHFKDHLLHDYSTKFDGPSILKRCGSNSNF-------IDESELCTNW*DHWMD 166
           H  +P+   KD+ L  Y+TKFDGPSILKRCGSNSNF       +DE++L  NW +HWM+
Sbjct: 194 HNTVPASPHKDYHLQGYNTKFDGPSILKRCGSNSNFRDINVMHLDEAKLGANWLEHWME 252


>ref|XP_002322461.1| predicted protein [Populus trichocarpa] gi|222869457|gb|EEF06588.1|
           calmodulin-binding family protein [Populus trichocarpa]
          Length = 451

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 5/54 (9%)
 Frame = +2

Query: 20  LPSIHFKDHLLHDYSTKFDGPSILKRCGSNSNF-----IDESELCTNW*DHWMD 166
           +P+   KDHL    STKFDGPSILKRCGSN+NF      D+ +L +NW + WM+
Sbjct: 183 VPASPSKDHLFRASSTKFDGPSILKRCGSNANFRESIDFDKVKLGSNWLERWME 236


>gb|EEE96450.2| hypothetical protein POPTR_0012s13350g [Populus trichocarpa]
          Length = 455

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 5/54 (9%)
 Frame = +2

Query: 20  LPSIHFKDHLLHDYSTKFDGPSILKRCGSNSNF-----IDESELCTNW*DHWMD 166
           +P+   KDHL    STKFDGPSILKRCGSN+NF      D+ +  +NW D WM+
Sbjct: 182 VPASPSKDHLFRVSSTKFDGPSILKRCGSNANFRESIDFDKVKWGSNWLDRWME 235


>ref|XP_002318230.1| predicted protein [Populus trichocarpa]
          Length = 279

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 5/54 (9%)
 Frame = +2

Query: 20  LPSIHFKDHLLHDYSTKFDGPSILKRCGSNSNF-----IDESELCTNW*DHWMD 166
           +P+   KDHL    STKFDGPSILKRCGSN+NF      D+ +  +NW D WM+
Sbjct: 182 VPASPSKDHLFRVSSTKFDGPSILKRCGSNANFRESIDFDKVKWGSNWLDRWME 235


>gb|EOY23117.1| IQ-domain 24, putative [Theobroma cacao]
          Length = 458

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 6/55 (10%)
 Frame = +2

Query: 20  LPSIHFKDHL-LHDYSTKFDGPSILKRCGSNSNF-----IDESELCTNW*DHWMD 166
           +P+   KD   L  YSTKFDGPSILKRCGSNSN      ++++ + +NW D WM+
Sbjct: 183 VPASSVKDECQLRAYSTKFDGPSILKRCGSNSNLGDIIDLEKARMGSNWLDRWME 237


Top