BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00021773
         (547 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   319   3e-85
gb|EOY10269.1| Sigma factor A isoform 2 [Theobroma cacao]             300   1e-79
gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]             300   1e-79
gb|ERP49007.1| hypothetical protein POPTR_0019s06020g [Populus t...   300   1e-79
ref|XP_002325882.1| predicted protein [Populus trichocarpa] gi|2...   300   1e-79
ref|XP_004499502.1| PREDICTED: RNA polymerase sigma factor sigA-...   296   3e-78
gb|ESR50643.1| hypothetical protein CICLE_v10031289mg [Citrus cl...   293   2e-77
ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-...   291   7e-77
ref|XP_004499499.1| PREDICTED: RNA polymerase sigma factor sigA-...   291   7e-77
gb|EMJ20222.1| hypothetical protein PRUPE_ppa004393mg [Prunus pe...   290   1e-76
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor rpoD-...   290   2e-76
ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor rpoD-...   288   6e-76
gb|ESW03465.1| hypothetical protein PHAVU_011G016400g [Phaseolus...   287   1e-75
gb|EEE95160.2| hypothetical protein POPTR_0013s07290g [Populus t...   282   3e-74
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...   282   4e-74
ref|XP_002319237.1| predicted protein [Populus trichocarpa]           281   9e-74
ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-...   276   2e-72
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-...   276   2e-72
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      276   2e-72
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   272   3e-71

>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 508

 Score =  319 bits (817), Expect = 3e-85
 Identities = 164/181 (90%), Positives = 174/181 (96%)
 Frame = +2

Query: 5   QSKSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEE 184
           QSK  VQA+ FKQLKSAVSPELL NRLKGYVKG+VSEELL+HAEVV LSRIIKAGLSLE+
Sbjct: 167 QSKFTVQANVFKQLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLED 226

Query: 185 HKSRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDN 364
           HKSRLK+RLGCDPSDEQ+ATSL+IS A+L+SK IACSLAREKLAMSNVRLVMSIAQRYDN
Sbjct: 227 HKSRLKERLGCDPSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDN 286

Query: 365 MGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHL 544
           MGAEMADLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPNHL
Sbjct: 287 MGAEMADLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHL 346

Query: 545 H 547
           H
Sbjct: 347 H 347


>gb|EOY10269.1| Sigma factor A isoform 2 [Theobroma cacao]
          Length = 450

 Score =  300 bits (769), Expect = 1e-79
 Identities = 153/182 (84%), Positives = 171/182 (93%)
 Frame = +2

Query: 2   IQSKSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLE 181
           IQ+KSI+Q +  KQL+S +SPELL +RLKGYVKG+VS+ELL+HAEVV LS+ IKAGLSLE
Sbjct: 167 IQNKSIIQPNA-KQLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLE 225

Query: 182 EHKSRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYD 361
           EH+ RLK+RLGC+PSDEQLATSL+IS A+LRSKLI CSLAREKLAMSNVRLVMSIAQRYD
Sbjct: 226 EHRLRLKERLGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYD 285

Query: 362 NMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNH 541
           NMGAEM+DL+QGGLIGLLRGIEKFDSSKG+KISTYVYWWIRQGVSRALVENSRTLRLP H
Sbjct: 286 NMGAEMSDLIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTH 345

Query: 542 LH 547
           LH
Sbjct: 346 LH 347


>gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]
          Length = 508

 Score =  300 bits (769), Expect = 1e-79
 Identities = 153/182 (84%), Positives = 171/182 (93%)
 Frame = +2

Query: 2   IQSKSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLE 181
           IQ+KSI+Q +  KQL+S +SPELL +RLKGYVKG+VS+ELL+HAEVV LS+ IKAGLSLE
Sbjct: 167 IQNKSIIQPNA-KQLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLE 225

Query: 182 EHKSRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYD 361
           EH+ RLK+RLGC+PSDEQLATSL+IS A+LRSKLI CSLAREKLAMSNVRLVMSIAQRYD
Sbjct: 226 EHRLRLKERLGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYD 285

Query: 362 NMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNH 541
           NMGAEM+DL+QGGLIGLLRGIEKFDSSKG+KISTYVYWWIRQGVSRALVENSRTLRLP H
Sbjct: 286 NMGAEMSDLIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTH 345

Query: 542 LH 547
           LH
Sbjct: 346 LH 347


>gb|ERP49007.1| hypothetical protein POPTR_0019s06020g [Populus trichocarpa]
          Length = 451

 Score =  300 bits (768), Expect = 1e-79
 Identities = 152/181 (83%), Positives = 167/181 (92%)
 Frame = +2

Query: 5   QSKSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEE 184
           QSK + Q+S FK L+S  SP+LL NRLKGYVKG+VS+E+L H EVV LSRII+AGLS E+
Sbjct: 168 QSKFMSQSSDFKFLRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFED 227

Query: 185 HKSRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDN 364
           HKSRLK+RLGC+PSDEQ+A SLRIS ADL+SKLI CSLAREKLAMSNVRLVMSIAQ+YDN
Sbjct: 228 HKSRLKERLGCEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDN 287

Query: 365 MGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHL 544
           MGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALV+NSRTLRLPNHL
Sbjct: 288 MGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHL 347

Query: 545 H 547
           H
Sbjct: 348 H 348


>ref|XP_002325882.1| predicted protein [Populus trichocarpa] gi|222862757|gb|EEF00264.1|
           RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus
           trichocarpa]
          Length = 509

 Score =  300 bits (768), Expect = 1e-79
 Identities = 152/181 (83%), Positives = 167/181 (92%)
 Frame = +2

Query: 5   QSKSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEE 184
           QSK + Q+S FK L+S  SP+LL NRLKGYVKG+VS+E+L H EVV LSRII+AGLS E+
Sbjct: 168 QSKFMSQSSDFKFLRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFED 227

Query: 185 HKSRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDN 364
           HKSRLK+RLGC+PSDEQ+A SLRIS ADL+SKLI CSLAREKLAMSNVRLVMSIAQ+YDN
Sbjct: 228 HKSRLKERLGCEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDN 287

Query: 365 MGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHL 544
           MGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALV+NSRTLRLPNHL
Sbjct: 288 MGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHL 347

Query: 545 H 547
           H
Sbjct: 348 H 348


>ref|XP_004499502.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Cicer
           arietinum] gi|502126947|ref|XP_004499503.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X2 [Cicer
           arietinum]
          Length = 513

 Score =  296 bits (757), Expect = 3e-78
 Identities = 150/180 (83%), Positives = 167/180 (92%), Gaps = 1/180 (0%)
 Frame = +2

Query: 11  KSIVQASGF-KQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEH 187
           K I   SG+ ++L+S +SPELL NRLKGYVKGIVSEELL+HA+VV LS+ IKAGLSL+EH
Sbjct: 173 KKITSKSGYARKLRSTISPELLQNRLKGYVKGIVSEELLSHAQVVKLSQKIKAGLSLDEH 232

Query: 188 KSRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNM 367
           KSRLK+RLGC+PSD+Q+ATSL+IS A+LR+K+I CSLAREKL MSNVRLVMSIAQRYDNM
Sbjct: 233 KSRLKERLGCEPSDDQVATSLKISRAELRAKIIECSLAREKLTMSNVRLVMSIAQRYDNM 292

Query: 368 GAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLH 547
           GAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLH
Sbjct: 293 GAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLH 352


>gb|ESR50643.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  293 bits (750), Expect = 2e-77
 Identities = 147/181 (81%), Positives = 165/181 (91%)
 Frame = +2

Query: 5   QSKSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEE 184
           Q+KS++Q +G KQL+S +SPEL+ N LKGYVKG+VSEELLTHAEVV LS+ IK GLSL++
Sbjct: 167 QNKSVLQQNGSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDD 226

Query: 185 HKSRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDN 364
           HK RLK+RLGC+PS EQLA SLRIS  +L+S L+ CSLAREKL MSNVRLVMSIAQRYDN
Sbjct: 227 HKLRLKERLGCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDN 286

Query: 365 MGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHL 544
           MGA+MADL+QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHL
Sbjct: 287 MGADMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHL 346

Query: 545 H 547
           H
Sbjct: 347 H 347


>ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X3 [Cicer
           arietinum]
          Length = 513

 Score =  291 bits (745), Expect = 7e-77
 Identities = 144/169 (85%), Positives = 162/169 (95%)
 Frame = +2

Query: 41  QLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHKSRLKDRLGCD 220
           Q++SA++PELL NRLKGYVKG+VSEELL+HA+VV LS+ IKAGLSL+EHKSRLK+RLGC+
Sbjct: 184 QMRSAITPELLQNRLKGYVKGVVSEELLSHAQVVKLSQKIKAGLSLDEHKSRLKERLGCE 243

Query: 221 PSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 400
           PSD+Q+ATSL+IS A+LR+K+I CSLAREKL MSNVRLVMSIAQRYDNMGAEMADLVQGG
Sbjct: 244 PSDDQVATSLKISQAELRAKIIECSLAREKLTMSNVRLVMSIAQRYDNMGAEMADLVQGG 303

Query: 401 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLH 547
           LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRTLRLP HLH
Sbjct: 304 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPTHLH 352


>ref|XP_004499499.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Cicer
           arietinum] gi|502126940|ref|XP_004499500.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X2 [Cicer
           arietinum]
          Length = 514

 Score =  291 bits (745), Expect = 7e-77
 Identities = 144/169 (85%), Positives = 162/169 (95%)
 Frame = +2

Query: 41  QLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHKSRLKDRLGCD 220
           Q++SA++PELL NRLKGYVKG+VSEELL+HA+VV LS+ IKAGLSL+EHKSRLK+RLGC+
Sbjct: 185 QMRSAITPELLQNRLKGYVKGVVSEELLSHAQVVKLSQKIKAGLSLDEHKSRLKERLGCE 244

Query: 221 PSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 400
           PSD+Q+ATSL+IS A+LR+K+I CSLAREKL MSNVRLVMSIAQRYDNMGAEMADLVQGG
Sbjct: 245 PSDDQVATSLKISQAELRAKIIECSLAREKLTMSNVRLVMSIAQRYDNMGAEMADLVQGG 304

Query: 401 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLH 547
           LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRTLRLP HLH
Sbjct: 305 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPTHLH 353


>gb|EMJ20222.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  290 bits (742), Expect = 1e-76
 Identities = 147/181 (81%), Positives = 162/181 (89%)
 Frame = +2

Query: 5   QSKSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEE 184
           +S  ++  S  K L++ VSPELL N +KGYVKG++SE+LLTH EVV LS+ IK GLS+EE
Sbjct: 171 KSTCVMHPSTNKPLRAIVSPELLQNHVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEE 230

Query: 185 HKSRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDN 364
           HKSRLK+RLGC+PSDEQLATSLRIS A L+SKLI C LAREKLAMSNVRLVMSIAQRYDN
Sbjct: 231 HKSRLKERLGCEPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDN 290

Query: 365 MGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHL 544
           MGAEMADL+QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HL
Sbjct: 291 MGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHL 350

Query: 545 H 547
           H
Sbjct: 351 H 351


>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
          Length = 503

 Score =  290 bits (741), Expect = 2e-76
 Identities = 144/179 (80%), Positives = 164/179 (91%)
 Frame = +2

Query: 11  KSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHK 190
           K+ ++  G  QLKS +SPELL +RLKGYVKG+VSEELL+HAEVV+LS  IK GLSLEEHK
Sbjct: 164 KTAIKTCGAMQLKSKISPELLQHRLKGYVKGLVSEELLSHAEVVNLSEKIKVGLSLEEHK 223

Query: 191 SRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMG 370
           SRLK++LGC+PSD+Q+ATSL+IS  +LR+++I CSLAREKLAMSNVRLVMSIAQ+YDN+G
Sbjct: 224 SRLKEKLGCEPSDDQMATSLKISRTELRARMIECSLAREKLAMSNVRLVMSIAQKYDNLG 283

Query: 371 AEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLH 547
           AEM DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLH
Sbjct: 284 AEMGDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLH 342


>ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
          Length = 503

 Score =  288 bits (737), Expect = 6e-76
 Identities = 144/179 (80%), Positives = 163/179 (91%)
 Frame = +2

Query: 11  KSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHK 190
           K+ ++  G  QLKS +SPELL +RLKGYVKGIVSEELL+HAEVV+LS  IK GLSLEEHK
Sbjct: 164 KTAIKTCGAMQLKSKISPELLQHRLKGYVKGIVSEELLSHAEVVNLSERIKVGLSLEEHK 223

Query: 191 SRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMG 370
           SRLK+RLGC+PSD+Q+A SL+IS  +LR+++I C+LAREKLAMSNVRLVMSIAQ+YDN+G
Sbjct: 224 SRLKERLGCEPSDDQMAISLKISRTELRARMIECTLAREKLAMSNVRLVMSIAQKYDNLG 283

Query: 371 AEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLH 547
           AEM DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLH
Sbjct: 284 AEMGDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLH 342


>gb|ESW03465.1| hypothetical protein PHAVU_011G016400g [Phaseolus vulgaris]
          Length = 504

 Score =  287 bits (734), Expect = 1e-75
 Identities = 142/179 (79%), Positives = 161/179 (89%)
 Frame = +2

Query: 11  KSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHK 190
           K+ V+  G  QLKS +SPELL NRLKGYVKG+VSEELL+HA+VVSLS  IK GLSLEEHK
Sbjct: 165 KTAVKTGGAVQLKSKISPELLQNRLKGYVKGVVSEELLSHAQVVSLSEKIKVGLSLEEHK 224

Query: 191 SRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMG 370
           SR+K+RLGC+PSD+++ATSL+IS  +LR K++ CSLAREKLAMSNVRLVMSIAQRY+N G
Sbjct: 225 SRMKERLGCEPSDDEIATSLKISSTELREKMLECSLAREKLAMSNVRLVMSIAQRYENAG 284

Query: 371 AEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLH 547
            EM DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+AL+ENSRTLRLP HLH
Sbjct: 285 TEMGDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALIENSRTLRLPAHLH 343


>gb|EEE95160.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
          Length = 499

 Score =  282 bits (722), Expect = 3e-74
 Identities = 143/166 (86%), Positives = 155/166 (93%)
 Frame = +2

Query: 50  SAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHKSRLKDRLGCDPSD 229
           S +SP+LLLNRLKGYVKG+VS+E+L H EVV LSRII+AGLSLE+HKS LK+RLGC+PSD
Sbjct: 173 SDISPDLLLNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLKERLGCEPSD 232

Query: 230 EQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG 409
           EQLA SLRIS ADL+S+LI CSLAREKLAMSNVRLVMSIAQ+ DNMGAEMADLVQ GLIG
Sbjct: 233 EQLADSLRISRADLQSQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAEMADLVQAGLIG 292

Query: 410 LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLH 547
           LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVEN RTLRLPNHLH
Sbjct: 293 LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENPRTLRLPNHLH 338


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
           gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
           polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score =  282 bits (721), Expect = 4e-74
 Identities = 146/184 (79%), Positives = 163/184 (88%), Gaps = 2/184 (1%)
 Frame = +2

Query: 2   IQSKSIVQASG--FKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLS 175
           IQSK +  A     KQL+  +SPELL NRLKGYVKG++SEELL+HAEVV LS+ IK GL+
Sbjct: 164 IQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLT 223

Query: 176 LEEHKSRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQR 355
           LEE K+RLK RLGC+PS++QLA SL+IS A+LRS+++  SLAREKLAMSNVRLVMSIAQR
Sbjct: 224 LEERKTRLKQRLGCEPSEDQLAISLKISRAELRSRMMESSLAREKLAMSNVRLVMSIAQR 283

Query: 356 YDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP 535
           YDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP
Sbjct: 284 YDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP 343

Query: 536 NHLH 547
            HLH
Sbjct: 344 THLH 347


>ref|XP_002319237.1| predicted protein [Populus trichocarpa]
          Length = 499

 Score =  281 bits (718), Expect = 9e-74
 Identities = 143/166 (86%), Positives = 154/166 (92%)
 Frame = +2

Query: 50  SAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHKSRLKDRLGCDPSD 229
           S +SP LLLNRLKGYVKG+VS+E+L H EVV LSRII+AGLSLE+HKS LK+RLGC+PSD
Sbjct: 173 SDISPGLLLNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLKERLGCEPSD 232

Query: 230 EQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG 409
           EQLA SLRIS ADL+S+LI CSLAREKLAMSNVRLVMSIAQ+ DNMGAEMADLVQ GLIG
Sbjct: 233 EQLADSLRISRADLQSQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAEMADLVQAGLIG 292

Query: 410 LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLH 547
           LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVEN RTLRLPNHLH
Sbjct: 293 LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENPRTLRLPNHLH 338


>ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-like [Fragaria vesca
           subsp. vesca]
          Length = 511

 Score =  276 bits (707), Expect = 2e-72
 Identities = 140/181 (77%), Positives = 157/181 (86%)
 Frame = +2

Query: 5   QSKSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEE 184
           ++ S +Q S  K  ++ +SP LL NR  GYVKG+ S+ LLTH EVV LS+ IK GLS+EE
Sbjct: 170 KNTSELQPSTNKYCRATISPSLLQNRTSGYVKGVTSDHLLTHTEVVRLSKKIKIGLSVEE 229

Query: 185 HKSRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDN 364
           HKSRLK++LGC+PS EQLATSLRIS  +L+SKLI CSLAREKL MSNVRLVMSIAQRYDN
Sbjct: 230 HKSRLKEKLGCEPSVEQLATSLRISRTELQSKLIQCSLAREKLTMSNVRLVMSIAQRYDN 289

Query: 365 MGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHL 544
           MGAEMADL+QGGLIGLLRGIEKFD+SKGFKISTYVYWWIRQGVSRALVENSRTLRLP HL
Sbjct: 290 MGAEMADLIQGGLIGLLRGIEKFDASKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHL 349

Query: 545 H 547
           H
Sbjct: 350 H 350


>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
           lycopersicum]
          Length = 509

 Score =  276 bits (707), Expect = 2e-72
 Identities = 140/181 (77%), Positives = 155/181 (85%)
 Frame = +2

Query: 5   QSKSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEE 184
           Q  S    S  K L+S + P+LL NRLKGYVKGIVSEELLTH EV+ LS+ IK GL +EE
Sbjct: 168 QKSSATPISATKPLRSILGPDLLQNRLKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEE 227

Query: 185 HKSRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDN 364
            KSRLK+RLGC+PSD+QLA SL++S  DL+S LI CSLARE+L+MSNVRLVMSIAQRYDN
Sbjct: 228 QKSRLKERLGCEPSDDQLAVSLKMSRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDN 287

Query: 365 MGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHL 544
           MGAEMADLVQGGLIGLLRGIEKFD SKG+KISTYVYWWIRQGVSR LVENSRTLRLP HL
Sbjct: 288 MGAEMADLVQGGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRTLVENSRTLRLPTHL 347

Query: 545 H 547
           H
Sbjct: 348 H 348


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  276 bits (706), Expect = 2e-72
 Identities = 140/178 (78%), Positives = 156/178 (87%)
 Frame = +2

Query: 14  SIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHKS 193
           S    S  K L+S + PELL NRLKGYVKG+VSEELLTHAEV+ LS+ I+ GL LEE KS
Sbjct: 170 SATPTSAAKPLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKS 229

Query: 194 RLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGA 373
           RLK+RLGC+PSD+QLA SL++S  DL+S LI CSLARE+LAMSNVRLVMSIAQRYDN+GA
Sbjct: 230 RLKERLGCEPSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGA 289

Query: 374 EMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLH 547
           EMADLVQGGLIGLLRGIEKFD SKG+KISTYVYWWIRQGVSRALVENSRTLRLP +LH
Sbjct: 290 EMADLVQGGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLH 347


>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
           vinifera]
          Length = 497

 Score =  272 bits (696), Expect = 3e-71
 Identities = 140/179 (78%), Positives = 159/179 (88%)
 Frame = +2

Query: 11  KSIVQASGFKQLKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHK 190
           K ++      ++++A+  E   NRLKGYVKG+VSEELLTHA+VV LS  IKAGL LE+HK
Sbjct: 161 KRVMNEKSKSRVRAALGVE---NRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHK 217

Query: 191 SRLKDRLGCDPSDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMG 370
           SRLK+R+G +P+DEQ+A SLR+S A+L+SKLI CSLAREKLAMSNVRLVMSIAQRYDNMG
Sbjct: 218 SRLKERIGSEPTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMG 277

Query: 371 AEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLH 547
           AEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP+HLH
Sbjct: 278 AEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLH 336