BLASTX nr result
ID: Jatropha_contig00021465
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00021465
(691 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ri... 255 1e-65
gb|EEF05018.2| hypothetical protein POPTR_0016s03800g [Populus t... 250 3e-64
ref|XP_002323257.1| predicted protein [Populus trichocarpa] 242 9e-62
gb|EOY09046.1| Eukaryotic rpb5 RNA polymerase subunit family pro... 239 4e-61
gb|EMJ03728.1| hypothetical protein PRUPE_ppa010980mg [Prunus pe... 231 1e-58
gb|ESR55319.1| hypothetical protein CICLE_v10021999mg [Citrus cl... 231 2e-58
gb|ESR55317.1| hypothetical protein CICLE_v10021999mg [Citrus cl... 231 2e-58
gb|ESR55316.1| hypothetical protein CICLE_v10021999mg [Citrus cl... 231 2e-58
ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, I... 227 3e-57
emb|CBI30093.3| unnamed protein product [Vitis vinifera] 221 1e-55
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I... 221 1e-55
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I... 220 4e-55
gb|ESW34110.1| hypothetical protein PHAVU_001G125200g [Phaseolus... 219 6e-55
ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III ... 218 1e-54
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin... 216 4e-54
ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, I... 216 5e-54
gb|AFK43162.1| unknown [Medicago truncatula] 216 7e-54
ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, I... 205 9e-51
ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V sub... 204 2e-50
ref|XP_004303602.1| PREDICTED: DNA-directed RNA polymerases I, I... 204 3e-50
>ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223531389|gb|EEF33224.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 238
Score = 255 bits (651), Expect = 1e-65
Identities = 125/167 (74%), Positives = 148/167 (88%)
Frame = +2
Query: 191 FDMGALGRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQ 370
F+M LG+C SSY D+G+ E+ RYYLSRRTVLEML+DRGY++PS +I++SLQEFRAIHG
Sbjct: 21 FNMEGLGKCFSSYADDGTHETHRYYLSRRTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGP 80
Query: 371 DPDIDRLKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQI 550
+PDIDRLK SA H S+P+KRMLV+F GPG++KVS++R IA QIVNKD LTGLIL+LQNQI
Sbjct: 81 NPDIDRLKFSATHTSDPSKRMLVLFGGPGIIKVSTIRAIAGQIVNKDSLTGLILVLQNQI 140
Query: 551 TNQALKAMDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
TNQA+KA+DLFKFKVEMFQITDLLV ITKHVLKPKH LT+R KQKL
Sbjct: 141 TNQAMKAVDLFKFKVEMFQITDLLVNITKHVLKPKHQVLTDREKQKL 187
>gb|EEF05018.2| hypothetical protein POPTR_0016s03800g [Populus trichocarpa]
Length = 243
Score = 250 bits (638), Expect = 3e-64
Identities = 122/170 (71%), Positives = 148/170 (87%)
Frame = +2
Query: 182 NGSFDMGALGRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAI 361
NGSF M +LGRCLSS+ DEGS ES RYYLSRRTVLEMLKDRGY++PS +I+ISLQ+FR +
Sbjct: 23 NGSFGMESLGRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGV 82
Query: 362 HGQDPDIDRLKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQ 541
+GQ+PDI+ LK SA HKS+P+KRMLVIFCG GVVKV +R+I QI ++D LTGLIL+LQ
Sbjct: 83 YGQNPDIELLKFSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQ 142
Query: 542 NQITNQALKAMDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
N ITNQA+KA+DLFKFK+E+FQITDLLV ITKH+LKPKH L+E+ KQ+L
Sbjct: 143 NNITNQAMKALDLFKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRL 192
>ref|XP_002323257.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 242 bits (617), Expect = 9e-62
Identities = 118/165 (71%), Positives = 144/165 (87%)
Frame = +2
Query: 197 MGALGRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDP 376
M +LGRCLSS+ DEGS ES RYYLSRRTVLEMLKDRGY++PS +I+ISLQ+FR ++GQ+P
Sbjct: 1 MESLGRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQDFRGVYGQNP 60
Query: 377 DIDRLKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITN 556
DI+ LK SA HKS+P+KRMLVIFCG GVVKV +R+I QI ++D LTGLIL+LQN ITN
Sbjct: 61 DIELLKFSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLILVLQNNITN 120
Query: 557 QALKAMDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
QA+KA+DLFKFK+E+FQITDLLV ITKH+LKPKH L+E+ KQ+L
Sbjct: 121 QAMKALDLFKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRL 165
>gb|EOY09046.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 228
Score = 239 bits (611), Expect = 4e-61
Identities = 119/163 (73%), Positives = 141/163 (86%)
Frame = +2
Query: 203 ALGRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDPDI 382
ALG+CLS D+GS ES RYYLSRRTVLEML+DRGYA+P +IN+SLQEFRAI+GQ PD
Sbjct: 15 ALGKCLSGVVDDGSTESHRYYLSRRTVLEMLRDRGYAVPISEINLSLQEFRAIYGQSPDF 74
Query: 383 DRLKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQA 562
DRL++SA HK++P+KR+LV+F GPG+VKVS +R+IA I NK+ LTGLIL+LQN ITNQA
Sbjct: 75 DRLRLSATHKTDPSKRILVVFYGPGMVKVSGIRLIAGLITNKESLTGLILVLQNHITNQA 134
Query: 563 LKAMDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
LKA+DLF FKVE+FQITDLLV ITKHVLKPKH LTE+ KQKL
Sbjct: 135 LKALDLFSFKVEIFQITDLLVNITKHVLKPKHQVLTEQEKQKL 177
>gb|EMJ03728.1| hypothetical protein PRUPE_ppa010980mg [Prunus persica]
Length = 228
Score = 231 bits (590), Expect = 1e-58
Identities = 111/173 (64%), Positives = 144/173 (83%)
Frame = +2
Query: 173 AETNGSFDMGALGRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEF 352
AE NG + LG CL+ Y D+GS ES RYYLSRRTVLEM++DRGY++PS +I++SLQ+F
Sbjct: 5 AEANGDANGEILGPCLTGYVDDGSPESHRYYLSRRTVLEMIRDRGYSVPSSEIDLSLQDF 64
Query: 353 RAIHGQDPDIDRLKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLIL 532
RA+HGQ+PD++RL+ SA H+++P+ R++VI+CGPG+VKV+ +R + +QI NKD L GLIL
Sbjct: 65 RALHGQNPDVERLRFSATHRTDPSDRIMVIYCGPGIVKVNVIRGLHSQIANKDTLNGLIL 124
Query: 533 ILQNQITNQALKAMDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
I QNQIT+QALK M+L+ FK E+FQITDLLV ITKHVLKPKH LTE+ KQKL
Sbjct: 125 ITQNQITSQALKTMELYPFKTEIFQITDLLVNITKHVLKPKHHVLTEQEKQKL 177
>gb|ESR55319.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
Length = 236
Score = 231 bits (589), Expect = 2e-58
Identities = 113/159 (71%), Positives = 139/159 (87%)
Frame = +2
Query: 215 CLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDPDIDRLK 394
CLS + D GS +S RYYLSRRTVLEMLKDRGYA+ +IN+S+Q+FRAI+GQDPD+DRL+
Sbjct: 27 CLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVALSEINLSVQDFRAIYGQDPDVDRLR 86
Query: 395 ISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQALKAM 574
IS H+S+P+KR+LV+FCGPG+VKV+ +R I +QIVN+D LTGLILILQNQIT+QA KA+
Sbjct: 87 ISISHQSDPSKRILVVFCGPGIVKVNVIRSIISQIVNRDTLTGLILILQNQITSQATKAV 146
Query: 575 DLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
LF+FKVEMFQITDLLV ITKHVLKPKH LT++ K+KL
Sbjct: 147 GLFQFKVEMFQITDLLVNITKHVLKPKHQVLTDQEKEKL 185
>gb|ESR55317.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
Length = 224
Score = 231 bits (589), Expect = 2e-58
Identities = 113/159 (71%), Positives = 139/159 (87%)
Frame = +2
Query: 215 CLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDPDIDRLK 394
CLS + D GS +S RYYLSRRTVLEMLKDRGYA+ +IN+S+Q+FRAI+GQDPD+DRL+
Sbjct: 27 CLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVALSEINLSVQDFRAIYGQDPDVDRLR 86
Query: 395 ISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQALKAM 574
IS H+S+P+KR+LV+FCGPG+VKV+ +R I +QIVN+D LTGLILILQNQIT+QA KA+
Sbjct: 87 ISISHQSDPSKRILVVFCGPGIVKVNVIRSIISQIVNRDTLTGLILILQNQITSQATKAV 146
Query: 575 DLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
LF+FKVEMFQITDLLV ITKHVLKPKH LT++ K+KL
Sbjct: 147 GLFQFKVEMFQITDLLVNITKHVLKPKHQVLTDQEKEKL 185
>gb|ESR55316.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
gi|557544340|gb|ESR55318.1| hypothetical protein
CICLE_v10021999mg [Citrus clementina]
Length = 225
Score = 231 bits (589), Expect = 2e-58
Identities = 113/159 (71%), Positives = 139/159 (87%)
Frame = +2
Query: 215 CLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDPDIDRLK 394
CLS + D GS +S RYYLSRRTVLEMLKDRGYA+ +IN+S+Q+FRAI+GQDPD+DRL+
Sbjct: 27 CLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVALSEINLSVQDFRAIYGQDPDVDRLR 86
Query: 395 ISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQALKAM 574
IS H+S+P+KR+LV+FCGPG+VKV+ +R I +QIVN+D LTGLILILQNQIT+QA KA+
Sbjct: 87 ISISHQSDPSKRILVVFCGPGIVKVNVIRSIISQIVNRDTLTGLILILQNQITSQATKAV 146
Query: 575 DLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
LF+FKVEMFQITDLLV ITKHVLKPKH LT++ K+KL
Sbjct: 147 GLFQFKVEMFQITDLLVNITKHVLKPKHQVLTDQEKEKL 185
>ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Fragaria vesca subsp. vesca]
Length = 225
Score = 227 bits (578), Expect = 3e-57
Identities = 110/170 (64%), Positives = 141/170 (82%)
Frame = +2
Query: 182 NGSFDMGALGRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAI 361
NG+ D G CLS + D+GS ES RY+LSRRTVLEML+DRGY++PS +I++SLQ+FR++
Sbjct: 5 NGNGDEVVAGPCLSGFVDDGSTESHRYFLSRRTVLEMLRDRGYSVPSSEIDLSLQDFRSL 64
Query: 362 HGQDPDIDRLKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQ 541
HGQ+PD DRL S +H S+P++RMLVI+CGPG+VKV+ +R + +QI NKD L+GLILILQ
Sbjct: 65 HGQNPDADRLCFSTVHSSDPSERMLVIYCGPGIVKVNVIRGLHSQIANKDTLSGLILILQ 124
Query: 542 NQITNQALKAMDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
QIT+QALK +DL+ FKVE+FQITDLLV ITKHVLKP+H LTE+ KQ L
Sbjct: 125 GQITSQALKTLDLYPFKVEIFQITDLLVNITKHVLKPQHQVLTEQAKQAL 174
>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 221 bits (564), Expect = 1e-55
Identities = 113/172 (65%), Positives = 143/172 (83%)
Frame = +2
Query: 176 ETNGSFDMGALGRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFR 355
+ NG F++ RCLSS+ DEG ES RYYL+RRT+LEML+DRGY+IP++DI+ISLQ+FR
Sbjct: 111 DLNGDFEVK---RCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFR 167
Query: 356 AIHGQDPDIDRLKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILI 535
+ + Q PD DRL+ISA +S+P+K++LVIFCGP VVKV+++R IA QIVNKD L+ LIL+
Sbjct: 168 SFYSQKPDPDRLRISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILV 227
Query: 536 LQNQITNQALKAMDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
LQN IT+QALKA+DLF F+VE FQITDLLV ITKHVLKPKH LT++ K KL
Sbjct: 228 LQNHITSQALKAVDLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKL 279
>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Vitis vinifera]
Length = 229
Score = 221 bits (564), Expect = 1e-55
Identities = 113/172 (65%), Positives = 143/172 (83%)
Frame = +2
Query: 176 ETNGSFDMGALGRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFR 355
+ NG F++ RCLSS+ DEG ES RYYL+RRT+LEML+DRGY+IP++DI+ISLQ+FR
Sbjct: 10 DLNGDFEVK---RCLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFR 66
Query: 356 AIHGQDPDIDRLKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILI 535
+ + Q PD DRL+ISA +S+P+K++LVIFCGP VVKV+++R IA QIVNKD L+ LIL+
Sbjct: 67 SFYSQKPDPDRLRISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILV 126
Query: 536 LQNQITNQALKAMDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
LQN IT+QALKA+DLF F+VE FQITDLLV ITKHVLKPKH LT++ K KL
Sbjct: 127 LQNHITSQALKAVDLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKL 178
>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
[Cucumis sativus]
Length = 227
Score = 220 bits (560), Expect = 4e-55
Identities = 111/161 (68%), Positives = 132/161 (81%)
Frame = +2
Query: 209 GRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDPDIDR 388
G CLSSY D+G+ ES RY+LSRRTV+EMLKDRGY I S +I+ SLQ+FR GQ PD+DR
Sbjct: 16 GTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDR 75
Query: 389 LKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQALK 568
LK+SA H S+P+KR+LV+FCG G VKV+++R IA QI NKD L GLILI+QNQITNQA+K
Sbjct: 76 LKLSAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMK 135
Query: 569 AMDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
A++LF FKVE+FQITDLLV ITKH LKP H LTE KQKL
Sbjct: 136 AVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKL 176
>gb|ESW34110.1| hypothetical protein PHAVU_001G125200g [Phaseolus vulgaris]
Length = 242
Score = 219 bits (558), Expect = 6e-55
Identities = 107/159 (67%), Positives = 134/159 (84%)
Frame = +2
Query: 215 CLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDPDIDRLK 394
CLS + D+G+ ES RYYLSRRT LEMLKDRGY+IPS +I++SL +FR +HG PD DRL+
Sbjct: 33 CLSKFIDDGTVESHRYYLSRRTTLEMLKDRGYSIPSNEIDLSLSQFRHMHGHSPDPDRLR 92
Query: 395 ISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQALKAM 574
+S H +NP+KR+LVIFCGPGVVKV+++R IA QIVN+D L+GLILI++N +T+QALKA+
Sbjct: 93 LSLAHATNPSKRILVIFCGPGVVKVTAIRNIAGQIVNRDTLSGLILIVENHVTSQALKAV 152
Query: 575 DLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
LF FKVE+FQITDLLV ITKHVLKPKH LT+R K+ L
Sbjct: 153 GLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDRQKKNL 191
>ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
[Medicago truncatula] gi|124359979|gb|ABN07995.1| RNA
polymerase subunit, RPB5; RNA polymerase Rpb5,
N-terminal [Medicago truncatula]
gi|355500048|gb|AES81251.1| DNA-directed RNA polymerases
I, II, and III subunit RPABC1 [Medicago truncatula]
Length = 248
Score = 218 bits (555), Expect = 1e-54
Identities = 108/160 (67%), Positives = 134/160 (83%)
Frame = +2
Query: 212 RCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDPDIDRL 391
+CL + D GS ES RYYLSRRTVLEMLKDRGY+IPS +I +SL +FR IHGQ PD+DRL
Sbjct: 38 QCLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRL 97
Query: 392 KISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQALKA 571
+++A H +NP+KR+LV+F GPG+VKV+ VR IA QIVN++ LTGLILI+QNQIT+QALKA
Sbjct: 98 RLTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKA 157
Query: 572 MDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
++L FKVE+FQITDLLV TKHVLKPKH LT++ K+ L
Sbjct: 158 VNLLSFKVEIFQITDLLVNATKHVLKPKHQVLTDKQKKNL 197
>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
gi|255627335|gb|ACU14012.1| unknown [Glycine max]
Length = 237
Score = 216 bits (551), Expect = 4e-54
Identities = 108/159 (67%), Positives = 132/159 (83%)
Frame = +2
Query: 215 CLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDPDIDRLK 394
CLS + D GS ES RYYLSRRT LEMLKDRGY+IPS +I++SL +FR IHGQ PD DRL+
Sbjct: 28 CLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQFPDPDRLR 87
Query: 395 ISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQALKAM 574
+S H +N +KR+LVIFCGPGVVKV+++R A QI+N+D LTGLILI++N IT+QALKA+
Sbjct: 88 LSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHITSQALKAV 147
Query: 575 DLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
+LF FKVE+FQITDLLV ITKHVLKPKH LT++ K L
Sbjct: 148 NLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKINL 186
>ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 244
Score = 216 bits (550), Expect = 5e-54
Identities = 108/161 (67%), Positives = 132/161 (81%)
Frame = +2
Query: 209 GRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDPDIDR 388
G+CL + D+GS ES RYYLSRRT LEMLKDRGY+IP +I +SL EFR HG PD+DR
Sbjct: 33 GKCLITKIDDGSVESHRYYLSRRTTLEMLKDRGYSIPPSEIQLSLHEFRQTHGHSPDVDR 92
Query: 389 LKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQALK 568
L+ +A H +NP+KR+LVIF GPG+VKV+ VR IA QIVN+D LTGLILI+Q+QIT+QALK
Sbjct: 93 LRFTATHTTNPSKRILVIFSGPGIVKVNVVRNIAGQIVNRDTLTGLILIVQSQITSQALK 152
Query: 569 AMDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
A++L FKVE+FQITDLLV ITKHVLKPKH LT++ K+ L
Sbjct: 153 AVNLLSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKKNL 193
>gb|AFK43162.1| unknown [Medicago truncatula]
Length = 248
Score = 216 bits (549), Expect = 7e-54
Identities = 107/160 (66%), Positives = 133/160 (83%)
Frame = +2
Query: 212 RCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDPDIDRL 391
+CL + D GS ES RYYLSRRTVLEMLKDRGY+IPS +I +SL +FR IHGQ PD+DRL
Sbjct: 38 QCLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRL 97
Query: 392 KISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQALKA 571
+++A H +NP+KR+LV+F GPG+VKV+ VR IA QIVN++ LTGLILI+QNQIT+QALKA
Sbjct: 98 RLTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKA 157
Query: 572 MDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
++L FKVE+ QITDLLV TKHVLKPKH LT++ K+ L
Sbjct: 158 VNLLSFKVEILQITDLLVNATKHVLKPKHQVLTDKQKKNL 197
>ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Solanum lycopersicum]
Length = 227
Score = 205 bits (522), Expect = 9e-51
Identities = 98/162 (60%), Positives = 135/162 (83%)
Frame = +2
Query: 206 LGRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDPDID 385
LG CL+S+ D+G+ ES RY+L+RRT+LEMLKDRG+AIP+ +I+ +LQEFR +GQ PD++
Sbjct: 15 LGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQEFREKYGQTPDVE 74
Query: 386 RLKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQAL 565
RL++SA+H+++ ++LVIFCGP VKV+ +R I QI+NK+ L+ LIL++QNQ+TN AL
Sbjct: 75 RLRVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSRLILVIQNQMTNPAL 134
Query: 566 KAMDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
KA++LF FKVE+FQITDLLV ITKHVLKP+H LT+ K+KL
Sbjct: 135 KAVELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKL 176
>ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 204 bits (520), Expect = 2e-50
Identities = 97/162 (59%), Positives = 135/162 (83%)
Frame = +2
Query: 206 LGRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAIHGQDPDID 385
LG CL+S+ D+G+ ES RY+L+RRT+LEMLKDRG+AIP+ +I+ +LQEFR +GQ PD++
Sbjct: 15 LGTCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQEFREKYGQTPDVE 74
Query: 386 RLKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQNQITNQAL 565
RL++SA+H+++ ++LVIFCGP VKV+ +R I QI+NK+ L+ LIL++QNQ+TN A+
Sbjct: 75 RLRVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSRLILVIQNQMTNPAM 134
Query: 566 KAMDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
KA++LF FKVE+FQITDLLV ITKHVLKP+H LT+ K+KL
Sbjct: 135 KAVELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKL 176
>ref|XP_004303602.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 2 [Fragaria vesca subsp. vesca]
Length = 215
Score = 204 bits (518), Expect = 3e-50
Identities = 101/170 (59%), Positives = 132/170 (77%)
Frame = +2
Query: 182 NGSFDMGALGRCLSSYGDEGSAESCRYYLSRRTVLEMLKDRGYAIPSVDINISLQEFRAI 361
NG+ D G CLS + D+GS ES RY+LSRRTVLEML+DRGY++PS +I++SLQ+FR++
Sbjct: 5 NGNGDEVVAGPCLSGFVDDGSTESHRYFLSRRTVLEMLRDRGYSVPSSEIDLSLQDFRSL 64
Query: 362 HGQDPDIDRLKISAIHKSNPNKRMLVIFCGPGVVKVSSVRVIAAQIVNKDILTGLILILQ 541
HGQ+PD DRL S +H S+P++RMLVI+CGPG+VKV+ +R + +QI NKD L+GLILILQ
Sbjct: 65 HGQNPDADRLCFSTVHSSDPSERMLVIYCGPGIVKVNVIRGLHSQIANKDTLSGLILILQ 124
Query: 542 NQITNQALKAMDLFKFKVEMFQITDLLVYITKHVLKPKHGGLTERGKQKL 691
QIT+QALK +DL+ FKVE+FQ HVLKP+H LTE+ KQ L
Sbjct: 125 GQITSQALKTLDLYPFKVEIFQ----------HVLKPQHQVLTEQAKQAL 164