BLASTX nr result

ID: Jatropha_contig00021195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00021195
         (212 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513664.1| DELLA protein GAI, putative [Ricinus communi...    61   2e-07
ref|XP_002327470.1| GRAS family transcription factor [Populus tr...    60   4e-07
ref|XP_002305914.1| GRAS family transcription factor [Populus tr...    59   8e-07
gb|ABK94962.1| unknown [Populus trichocarpa]                           59   8e-07
ref|NP_001234327.1| GRAS10 protein [Solanum lycopersicum] gi|894...    55   7e-06

>ref|XP_002513664.1| DELLA protein GAI, putative [Ricinus communis]
           gi|223547572|gb|EEF49067.1| DELLA protein GAI, putative
           [Ricinus communis]
          Length = 615

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 37/66 (56%), Positives = 40/66 (60%)
 Frame = +2

Query: 14  PINLGPGHTIHSANVASHALPYMNALQNQNRGGGSIAGQESKKKMMNRLQEL*KQLLDDN 193
           PINLG G            LP MN LQN    GG    QE++KKMMNRLQEL KQLLDDN
Sbjct: 143 PINLGSG------------LPCMNTLQNHQHRGG----QETQKKMMNRLQELEKQLLDDN 186

Query: 194 YEEGGD 211
            +E GD
Sbjct: 187 DDEEGD 192


>ref|XP_002327470.1| GRAS family transcription factor [Populus trichocarpa]
           gi|550319073|gb|ERP50246.1| hypothetical protein
           POPTR_0017s01730g [Populus trichocarpa]
          Length = 666

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
 Frame = +2

Query: 11  QPINLGPGHTIHSANVASHALPYMNALQNQNRGG-GSIAGQESKKKMMNRLQEL*KQLL- 184
           +P+NL   + + + N  ++ +PY+N LQNQN GG G + GQ+ +KKM+N+LQEL KQLL 
Sbjct: 175 RPMNLMSSNGVINNN-NNNMMPYVNMLQNQNGGGNGVVMGQDREKKMLNQLQELEKQLLD 233

Query: 185 -DDNYEEGGD 211
            DD+ +EG D
Sbjct: 234 DDDDNQEGDD 243


>ref|XP_002305914.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222848878|gb|EEE86425.1| hypothetical protein
           POPTR_0004s07700g [Populus trichocarpa]
          Length = 640

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
 Frame = +2

Query: 11  QPINLGPGHTIHSANVASH--ALPYMNALQNQNRGG-GSIAGQESKKKMMNRLQEL*KQL 181
           QP+NL     I + N +S+   +PY+N LQNQN GG G + GQ+ +KKM+N+LQEL KQL
Sbjct: 144 QPMNLISPIGIINNNRSSNNSMMPYVNMLQNQNGGGNGIVMGQDREKKMLNQLQELEKQL 203

Query: 182 LDDN 193
           LDD+
Sbjct: 204 LDDD 207


>gb|ABK94962.1| unknown [Populus trichocarpa]
          Length = 521

 Score = 58.5 bits (140), Expect = 8e-07
 Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
 Frame = +2

Query: 11  QPINLGPGHTIHSANVASH--ALPYMNALQNQNRGG-GSIAGQESKKKMMNRLQEL*KQL 181
           QP+NL     I + N +S+   +PY+N LQNQN GG G + GQ+ +KKM+N+LQEL KQL
Sbjct: 25  QPMNLISPIGIINNNRSSNNSMMPYVNMLQNQNGGGNGIVMGQDREKKMLNQLQELEKQL 84

Query: 182 LDDN 193
           LDD+
Sbjct: 85  LDDD 88


>ref|NP_001234327.1| GRAS10 protein [Solanum lycopersicum] gi|89474476|gb|ABD72965.1|
           GRAS10 [Solanum lycopersicum]
          Length = 631

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
 Frame = +2

Query: 5   ISQPINLG----PGHTIHSANVASHALPYMNALQNQNRGGGSIAGQESKKKMMNRLQEL* 172
           + QP N+G    PG   +S  V+S     +N +QN    G +I  QES KKMMN LQEL 
Sbjct: 145 LQQPANMGGFLSPGIQNYSTGVSS-----LNPVQN----GATIGVQESDKKMMNCLQELE 195

Query: 173 KQLLDDNYEEGGD 211
           KQLLDDN EE GD
Sbjct: 196 KQLLDDNDEEEGD 208


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