BLASTX nr result

ID: Jatropha_contig00021133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00021133
         (693 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005090401.1| sdh3 gene product (mitochondrion) [Boea hygr...    52   1e-10

>ref|YP_005090401.1| sdh3 gene product (mitochondrion) [Boea hygrometrica]
           gi|340549504|gb|AEK53325.1| succinate dehydrogenase
           subunit 3 (mitochondrion) [Boea hygrometrica]
          Length = 150

 Score = 51.6 bits (122), Expect(2) = 1e-10
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = -3

Query: 202 VLACCHAGKSRGFGRFYLLLDLNQ 131
           V ACCHAGKSRGFG+FYLLLDLNQ
Sbjct: 127 VRACCHAGKSRGFGKFYLLLDLNQ 150



 Score = 41.2 bits (95), Expect(2) = 1e-10
 Identities = 19/21 (90%), Positives = 20/21 (95%), Gaps = 1/21 (4%)
 Frame = -2

Query: 254 KATSGSNRCFDH-SMLPVRAC 195
           KATSGSNRCFDH S+LPVRAC
Sbjct: 110 KATSGSNRCFDHDSLLPVRAC 130


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