BLASTX nr result

ID: Jatropha_contig00020838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00020838
         (672 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_007516878.1| hypothetical protein GlmaxMp29 (mitochondrio...    95   2e-17
ref|XP_003588269.1| Mitochondrial protein, putative [Medicago tr...    66   5e-13
emb|CAN80599.1| hypothetical protein VITISV_016761 [Vitis vinifera]    45   1e-08
emb|CAN67792.1| hypothetical protein VITISV_001313 [Vitis vinifera]    44   3e-08
gb|ERN18087.1| hypothetical protein AMTR_s00046p00226540 [Ambore...    51   5e-06

>ref|YP_007516878.1| hypothetical protein GlmaxMp29 (mitochondrion) [Glycine max]
           gi|403311598|gb|AFR34346.1| hypothetical protein
           GlmaxMp29 (mitochondrion) [Glycine max]
          Length = 106

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 56/80 (70%), Positives = 60/80 (75%), Gaps = 8/80 (10%)
 Frame = +2

Query: 194 GLLK--LRHFSANQKDWSCWMLLSAA-----ITTKKLCVELQPLRVGHGATASDAPHHCE 352
           GLL+  LRHFSANQ +     LL  A     +TTKKLCVELQPLRVGHGATASDAPHHC 
Sbjct: 29  GLLEGYLRHFSANQPEGL--ELLDVAQCCYKLTTKKLCVELQPLRVGHGATASDAPHHCG 86

Query: 353 KRGLAHQPT-LPRGGRIATT 409
           +R LAHQPT LPR GR ATT
Sbjct: 87  RRRLAHQPTFLPRRGRSATT 106


>ref|XP_003588269.1| Mitochondrial protein, putative [Medicago truncatula]
           gi|355477317|gb|AES58520.1| Mitochondrial protein,
           putative [Medicago truncatula]
          Length = 172

 Score = 65.9 bits (159), Expect(2) = 5e-13
 Identities = 32/36 (88%), Positives = 32/36 (88%)
 Frame = -2

Query: 374 ADGQAPSFRNGVGRQRLLPRGQLEGAEVRRRAFWLL 267
           ADGQA S RNGVGRQRLLPR QLEGAEVRRRAFW L
Sbjct: 39  ADGQASSCRNGVGRQRLLPRRQLEGAEVRRRAFWFL 74



 Score = 34.7 bits (78), Expect(2) = 5e-13
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = -3

Query: 277 FGCYSSTEQHPTAPVLLV 224
           F  YSSTEQHPTAPVLLV
Sbjct: 73  FLIYSSTEQHPTAPVLLV 90


>emb|CAN80599.1| hypothetical protein VITISV_016761 [Vitis vinifera]
          Length = 1404

 Score = 45.4 bits (106), Expect(2) = 1e-08
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +3

Query: 276  KSSASNFSPFELATGQQPLTPHTI 347
            KS A+N SPFELATGQQPLTPHT+
Sbjct: 1198 KSEATNKSPFELATGQQPLTPHTL 1221



 Score = 40.0 bits (92), Expect(2) = 1e-08
 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
 Frame = +1

Query: 358  GACPSAY-FAKRWQDRNDLAQTHLDKAARRMKGATTLLGDNSKRSTK-----------PS 501
            G  P+A+ FAK W ++ D+A+++LDKAA++MK       D  +R T+            S
Sbjct: 1227 GRSPAAFKFAKGWHEQADIARSYLDKAAKKMK----KWADXKRRHTEYKVRDMVLIKLLS 1282

Query: 502  PTYLNNLKAWPGLKEEESRPCKEADRRG--SL*TQAISSVKTHPVFHVSQLTSIRPDR 669
              + +    + GL      P     + G  S   +    +K H VFHVS L     D+
Sbjct: 1283 QQFKSLRPVYKGLVRRYEGPFPILGKVGKVSYKVELPPRLKIHSVFHVSYLKPYHEDK 1340


>emb|CAN67792.1| hypothetical protein VITISV_001313 [Vitis vinifera]
          Length = 1414

 Score = 44.3 bits (103), Expect(2) = 3e-08
 Identities = 19/31 (61%), Positives = 26/31 (83%)
 Frame = +3

Query: 255  SVLL*QPKSSASNFSPFELATGQQPLTPHTI 347
            S+++   +S A+N SPFELATGQQP+TPHT+
Sbjct: 1181 SIIVAVDRSEATNKSPFELATGQQPVTPHTL 1211



 Score = 40.0 bits (92), Expect(2) = 3e-08
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 14/118 (11%)
 Frame = +1

Query: 358  GACPSAY-FAKRWQDRNDLAQTHLDKAARRMKGATTLLGDNSKRSTKPSPTYLNNLKAWP 534
            G  P+ + FAK W ++ D+A+++LDKAA++MK       D  +R TK     +  +K  P
Sbjct: 1217 GRSPATFKFAKGWHEQADIARSYLDKAAKKMK----KWADKKRRHTKYKVGDMVLVKLLP 1272

Query: 535  -----------GL--KEEESRPCKEADRRGSL*TQAISSVKTHPVFHVSQLTSIRPDR 669
                       GL  + E   P      + S   +    +K HPVFH S L     D+
Sbjct: 1273 QQFKSLRPVHKGLVRRYEGPFPILGKVDKVSYRVELPPRLKIHPVFHASYLKPYHRDK 1330


>gb|ERN18087.1| hypothetical protein AMTR_s00046p00226540 [Amborella trichopoda]
          Length = 234

 Score = 50.8 bits (120), Expect(2) = 5e-06
 Identities = 45/148 (30%), Positives = 61/148 (41%), Gaps = 5/148 (3%)
 Frame = +1

Query: 238 ELLDVAQCCYNNQKALRRTSAPSSWPRGNSL*RPTPLRKE--GACPSAY-FAKRWQDRND 408
           +LLDVAQ  YN Q +      P           PT L +   G   +AY F K W  + +
Sbjct: 35  KLLDVAQFSYNLQTSESTGRNPFQLVTRQQPLTPTSLLESYGGRNLAAYRFVKGWHKKTN 94

Query: 409 LAQTHLDKAARRMKGATTLLGDNSKRSTKPSPTYLNNLKAWPGLKEEESRPCKEADRRG- 585
           LA+++L+KAA+RMK                          W   K   +R      + G 
Sbjct: 95  LARSYLEKAAKRMKN-------------------------WANKKRRLARTLPHNQKGGE 129

Query: 586 -SL*TQAISSVKTHPVFHVSQLTSIRPD 666
            S   +  + +K HPVFHVSQL S   D
Sbjct: 130 VSYKLELFAQLKIHPVFHVSQLKSYHED 157



 Score = 25.8 bits (55), Expect(2) = 5e-06
 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +2

Query: 152 IFESSYGKNKRTPRGL-LKLRHF-SANQKDWS 241
           I+E   G+ KR    L L LR+F SANQKDW+
Sbjct: 3   IYEERDGQPKRVNILLQLYLRYFVSANQKDWA 34


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