BLASTX nr result
ID: Jatropha_contig00020750
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00020750
(670 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004152823.1| PREDICTED: uncharacterized protein LOC101207... 148 2e-51
gb|ESR55912.1| hypothetical protein CICLE_v10021882mg [Citrus cl... 151 2e-51
gb|EEE99718.2| hypothetical protein POPTR_0019s03570g [Populus t... 147 5e-51
gb|EEE95031.2| RNA recognition motif-containing family protein [... 148 9e-51
ref|XP_002319108.1| predicted protein [Populus trichocarpa] 148 9e-51
ref|XP_004155100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 145 1e-50
gb|EOY10914.1| RNA-binding family protein [Theobroma cacao] 147 2e-50
ref|XP_002521977.1| rrm-containing protein, putative [Ricinus co... 147 2e-50
gb|EMJ06977.1| hypothetical protein PRUPE_ppa010477mg [Prunus pe... 144 8e-49
ref|XP_002325337.1| predicted protein [Populus trichocarpa] 139 1e-48
ref|XP_006345891.1| PREDICTED: RNA-binding protein 42-like isofo... 140 3e-48
ref|XP_006345892.1| PREDICTED: RNA-binding protein 42-like isofo... 140 3e-48
ref|XP_004239744.1| PREDICTED: RNA-binding protein 42-like isofo... 137 8e-47
ref|XP_004239745.1| PREDICTED: RNA-binding protein 42-like isofo... 137 8e-47
ref|NP_187100.1| RNA recognition motif-containing protein [Arabi... 139 1e-46
gb|ESW16010.1| hypothetical protein PHAVU_007G122100g [Phaseolus... 131 5e-46
ref|XP_003556455.1| PREDICTED: RNA-binding protein 42-like [Glyc... 132 6e-46
ref|XP_003536140.1| PREDICTED: RNA-binding protein 42-like [Glyc... 130 3e-45
ref|XP_003537815.1| PREDICTED: RNA-binding protein 42-like [Glyc... 132 5e-45
gb|ACG33680.1| hypothetical protein [Zea mays] 117 2e-42
>ref|XP_004152823.1| PREDICTED: uncharacterized protein LOC101207945 [Cucumis sativus]
Length = 253
Score = 148 bits (373), Expect(2) = 2e-51
Identities = 81/143 (56%), Positives = 85/143 (59%), Gaps = 14/143 (9%)
Frame = +3
Query: 180 YFPMPFHLQQSVQTXXXXXXXXXXXXXXXXXXXXXXXS--------------LPXXXXXX 317
YFP+PFHLQQS + LP
Sbjct: 26 YFPLPFHLQQSAPAPAPPQYSSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQ 85
Query: 318 XXXXXXXXTITPEALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDY 497
TITPEALESVKAALASSEIEHK ETKKKA+PRKAAGQ+WEDPTLAEWPENDY
Sbjct: 86 QLFQRDAQTITPEALESVKAALASSEIEHKAETKKKAIPRKAAGQSWEDPTLAEWPENDY 145
Query: 498 RLFCGDLGNEVNDDVLSKHFPGF 566
RLFCGDLGNEVNDDVLSK F F
Sbjct: 146 RLFCGDLGNEVNDDVLSKAFSRF 168
Score = 80.9 bits (198), Expect(2) = 2e-51
Identities = 39/41 (95%), Positives = 39/41 (95%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPT LA AL
Sbjct: 163 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGAL 203
>gb|ESR55912.1| hypothetical protein CICLE_v10021882mg [Citrus clementina]
Length = 247
Score = 151 bits (382), Expect(2) = 2e-51
Identities = 81/134 (60%), Positives = 86/134 (64%), Gaps = 5/134 (3%)
Frame = +3
Query: 180 YFPMPFHLQQSVQTXXXXXXXXXXXXXXXXXXXXXXX-----SLPXXXXXXXXXXXXXXT 344
YFP+PFHLQQ+ T SLP T
Sbjct: 29 YFPLPFHLQQTDPTAVSQYPPPAAYPAPVVPSVYAAPVAPVYSLPQYHQAQQLFQRDAQT 88
Query: 345 ITPEALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCGDLGN 524
ITPEALESVKAALASS+IEHK ETKKK++PRKAAGQTWEDPTLAEWPENDYRLFCGDLGN
Sbjct: 89 ITPEALESVKAALASSDIEHKAETKKKSIPRKAAGQTWEDPTLAEWPENDYRLFCGDLGN 148
Query: 525 EVNDDVLSKHFPGF 566
EVNDDVLSK F F
Sbjct: 149 EVNDDVLSKAFSRF 162
Score = 77.4 bits (189), Expect(2) = 2e-51
Identities = 35/41 (85%), Positives = 40/41 (97%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFNMA+VVRDKRTGKTKGYGF+SF+NP+ +AAAL
Sbjct: 157 KAFSRFPSFNMAKVVRDKRTGKTKGYGFISFANPSDIAAAL 197
>gb|EEE99718.2| hypothetical protein POPTR_0019s03570g [Populus trichocarpa]
Length = 243
Score = 147 bits (372), Expect(2) = 5e-51
Identities = 78/131 (59%), Positives = 83/131 (63%), Gaps = 2/131 (1%)
Frame = +3
Query: 180 YFPMPFHLQQS--VQTXXXXXXXXXXXXXXXXXXXXXXXSLPXXXXXXXXXXXXXXTITP 353
YFP PFHLQQS SLP TITP
Sbjct: 28 YFPTPFHLQQSETYPKPYVAPPPTVMAPVYPPAPIGPVYSLPQYQQAHQLFQRDAQTITP 87
Query: 354 EALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCGDLGNEVN 533
EALESVKAALA+SE+EHK ETK+KA+PRKAAGQTWEDP LAEWPENDYR+FCGDLGNEVN
Sbjct: 88 EALESVKAALANSEVEHKAETKRKAIPRKAAGQTWEDPVLAEWPENDYRVFCGDLGNEVN 147
Query: 534 DDVLSKHFPGF 566
DDVLSK F F
Sbjct: 148 DDVLSKAFSRF 158
Score = 80.1 bits (196), Expect(2) = 5e-51
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFN+ARVVRDKRTGKTKGYGFVSF+NPT LAAAL
Sbjct: 153 KAFSRFPSFNLARVVRDKRTGKTKGYGFVSFANPTDLAAAL 193
>gb|EEE95031.2| RNA recognition motif-containing family protein [Populus
trichocarpa]
Length = 244
Score = 148 bits (374), Expect(2) = 9e-51
Identities = 81/131 (61%), Positives = 82/131 (62%), Gaps = 2/131 (1%)
Frame = +3
Query: 180 YFPMPFHLQQS--VQTXXXXXXXXXXXXXXXXXXXXXXXSLPXXXXXXXXXXXXXXTITP 353
YFP PFHLQQS SLP TITP
Sbjct: 29 YFPTPFHLQQSDPYPKPYVTSPPTVMAPVYPPAPIGPVYSLPQYQQAQQLFQRDAQTITP 88
Query: 354 EALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCGDLGNEVN 533
EALE VKAALASSEIEHK ETKKKAVPRKAAG TWEDPTLAEWPENDYR+FCGDLGNEVN
Sbjct: 89 EALEGVKAALASSEIEHKAETKKKAVPRKAAGLTWEDPTLAEWPENDYRVFCGDLGNEVN 148
Query: 534 DDVLSKHFPGF 566
DDVLSK F F
Sbjct: 149 DDVLSKAFSRF 159
Score = 78.6 bits (192), Expect(2) = 9e-51
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFN+ARVVRDKR+GKTKGYGFVSF+NPT LAAAL
Sbjct: 154 KAFSRFPSFNLARVVRDKRSGKTKGYGFVSFANPTDLAAAL 194
>ref|XP_002319108.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 148 bits (374), Expect(2) = 9e-51
Identities = 81/131 (61%), Positives = 82/131 (62%), Gaps = 2/131 (1%)
Frame = +3
Query: 180 YFPMPFHLQQS--VQTXXXXXXXXXXXXXXXXXXXXXXXSLPXXXXXXXXXXXXXXTITP 353
YFP PFHLQQS SLP TITP
Sbjct: 7 YFPTPFHLQQSDPYPKPYVTSPPTVMAPVYPPAPIGPVYSLPQYQQAQQLFQRDAQTITP 66
Query: 354 EALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCGDLGNEVN 533
EALE VKAALASSEIEHK ETKKKAVPRKAAG TWEDPTLAEWPENDYR+FCGDLGNEVN
Sbjct: 67 EALEGVKAALASSEIEHKAETKKKAVPRKAAGLTWEDPTLAEWPENDYRVFCGDLGNEVN 126
Query: 534 DDVLSKHFPGF 566
DDVLSK F F
Sbjct: 127 DDVLSKAFSRF 137
Score = 78.6 bits (192), Expect(2) = 9e-51
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFN+ARVVRDKR+GKTKGYGFVSF+NPT LAAAL
Sbjct: 132 KAFSRFPSFNLARVVRDKRSGKTKGYGFVSFANPTDLAAAL 172
>ref|XP_004155100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101207945
[Cucumis sativus]
Length = 253
Score = 145 bits (367), Expect(2) = 1e-50
Identities = 80/143 (55%), Positives = 84/143 (58%), Gaps = 14/143 (9%)
Frame = +3
Query: 180 YFPMPFHLQQSVQTXXXXXXXXXXXXXXXXXXXXXXXS--------------LPXXXXXX 317
YFP+PFHLQQS + LP
Sbjct: 26 YFPLPFHLQQSAPAPAPPQYSSPYVAPPGPPPVPLPVAPVYPAPAPPPAVYTLPQYQQAQ 85
Query: 318 XXXXXXXXTITPEALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDY 497
TITPEALESVKAALASSEIEHK E KKKA+PRKAAGQ+WEDPTLAEWPENDY
Sbjct: 86 QLFQRDAQTITPEALESVKAALASSEIEHKAEXKKKAIPRKAAGQSWEDPTLAEWPENDY 145
Query: 498 RLFCGDLGNEVNDDVLSKHFPGF 566
RLFCGDLGNEVNDDVLSK F F
Sbjct: 146 RLFCGDLGNEVNDDVLSKAFSRF 168
Score = 80.9 bits (198), Expect(2) = 1e-50
Identities = 39/41 (95%), Positives = 39/41 (95%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPT LA AL
Sbjct: 163 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAGAL 203
>gb|EOY10914.1| RNA-binding family protein [Theobroma cacao]
Length = 246
Score = 147 bits (372), Expect(2) = 2e-50
Identities = 78/133 (58%), Positives = 83/133 (62%), Gaps = 4/133 (3%)
Frame = +3
Query: 180 YFPMPFHLQQSVQTXXXXXXXXXXXXXXXXXXXXXXX----SLPXXXXXXXXXXXXXXTI 347
YFP+PFHLQQ Q SLP +
Sbjct: 29 YFPLPFHLQQQAQPYAPPAQPVPVAPAPVYPAPVAPVPGVYSLPQYQQAQQLFQRDAQIV 88
Query: 348 TPEALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCGDLGNE 527
TPEALESVKAALASSEIEHK ETKKK +PRKAAGQ+WEDPTLAEWPEND+RLFCGDLGNE
Sbjct: 89 TPEALESVKAALASSEIEHKAETKKKVIPRKAAGQSWEDPTLAEWPENDFRLFCGDLGNE 148
Query: 528 VNDDVLSKHFPGF 566
VNDDVLSK F F
Sbjct: 149 VNDDVLSKAFARF 161
Score = 78.6 bits (192), Expect(2) = 2e-50
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAF+RFPSFNMARVVRDKRTGKTKGYGFVSF+NP+ LAAAL
Sbjct: 156 KAFARFPSFNMARVVRDKRTGKTKGYGFVSFANPSDLAAAL 196
>ref|XP_002521977.1| rrm-containing protein, putative [Ricinus communis]
gi|223538781|gb|EEF40381.1| rrm-containing protein,
putative [Ricinus communis]
Length = 238
Score = 147 bits (370), Expect(2) = 2e-50
Identities = 79/128 (61%), Positives = 82/128 (64%)
Frame = +3
Query: 183 FPMPFHLQQSVQTXXXXXXXXXXXXXXXXXXXXXXXSLPXXXXXXXXXXXXXXTITPEAL 362
FP+PFHLQQ +LP TITPEAL
Sbjct: 28 FPLPFHLQQP--PLQPYAPVQPVVAPVYSAPVGSVYTLPQYQQAQQLFQRDAQTITPEAL 85
Query: 363 ESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCGDLGNEVNDDV 542
E VKAALASSEIEHK ETKKKAVPRKAAGQ+WEDPTLAEWPENDYRLFCGDLGNEVNDDV
Sbjct: 86 EGVKAALASSEIEHKAETKKKAVPRKAAGQSWEDPTLAEWPENDYRLFCGDLGNEVNDDV 145
Query: 543 LSKHFPGF 566
LSK F F
Sbjct: 146 LSKAFSRF 153
Score = 79.0 bits (193), Expect(2) = 2e-50
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFNMARVVRDKRTGKTKGYGFVSF NP+ LAAAL
Sbjct: 148 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFCNPSDLAAAL 188
>gb|EMJ06977.1| hypothetical protein PRUPE_ppa010477mg [Prunus persica]
Length = 248
Score = 144 bits (362), Expect(2) = 8e-49
Identities = 80/135 (59%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Frame = +3
Query: 180 YFPMPFHLQQS-----VQTXXXXXXXXXXXXXXXXXXXXXXXSLPXXXXXXXXXXXXXX- 341
YFPMPFHLQQ SLP
Sbjct: 29 YFPMPFHLQQPQYPTPYAAAAPPAPPVYPAPAPAPAPTSGVYSLPQQYQQAQQLFQRDAQ 88
Query: 342 TITPEALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCGDLG 521
TITPEALESVKAALA+SEIEHK E KKKA+PRKAAGQ+WEDPTLAEWPENDYRLFCGDLG
Sbjct: 89 TITPEALESVKAALANSEIEHKAEAKKKAIPRKAAGQSWEDPTLAEWPENDYRLFCGDLG 148
Query: 522 NEVNDDVLSKHFPGF 566
NEVNDDVLSK F F
Sbjct: 149 NEVNDDVLSKAFSRF 163
Score = 76.6 bits (187), Expect(2) = 8e-49
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFNMARVVRDKRTGKTKG+GFVSF+NP+ LA AL
Sbjct: 158 KAFSRFPSFNMARVVRDKRTGKTKGFGFVSFANPSDLAGAL 198
>ref|XP_002325337.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 139 bits (351), Expect(2) = 1e-48
Identities = 65/75 (86%), Positives = 70/75 (93%)
Frame = +3
Query: 342 TITPEALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCGDLG 521
TITPEALESVKAALA+SE+EHK ETK+KA+PRKAAGQTWEDP LAEWPENDYR+FCGDLG
Sbjct: 19 TITPEALESVKAALANSEVEHKAETKRKAIPRKAAGQTWEDPILAEWPENDYRVFCGDLG 78
Query: 522 NEVNDDVLSKHFPGF 566
NEVNDDVLSK F F
Sbjct: 79 NEVNDDVLSKAFSRF 93
Score = 80.1 bits (196), Expect(2) = 1e-48
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFN+ARVVRDKRTGKTKGYGFVSF+NPT LAAAL
Sbjct: 88 KAFSRFPSFNLARVVRDKRTGKTKGYGFVSFANPTDLAAAL 128
>ref|XP_006345891.1| PREDICTED: RNA-binding protein 42-like isoform X1 [Solanum
tuberosum]
Length = 235
Score = 140 bits (354), Expect(2) = 3e-48
Identities = 77/135 (57%), Positives = 81/135 (60%), Gaps = 6/135 (4%)
Frame = +3
Query: 180 YFPMPFHLQQSVQ------TXXXXXXXXXXXXXXXXXXXXXXXSLPXXXXXXXXXXXXXX 341
YFP PFHLQQ SLP
Sbjct: 16 YFPTPFHLQQQPSQPYIGSAPSPIAPPVVPPVYSAPAAVPDVYSLPQYLQTQQLFQRVVQ 75
Query: 342 TITPEALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCGDLG 521
TITPEA+E+VKAALASSEIE K E KKKAVPRKAAGQTWEDPTLAEWPEND+RLFCG+LG
Sbjct: 76 TITPEAIENVKAALASSEIEQKAEVKKKAVPRKAAGQTWEDPTLAEWPENDFRLFCGNLG 135
Query: 522 NEVNDDVLSKHFPGF 566
NEVNDDVLSK F F
Sbjct: 136 NEVNDDVLSKAFSRF 150
Score = 77.8 bits (190), Expect(2) = 3e-48
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNP+ L AL
Sbjct: 145 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPSDLVVAL 185
>ref|XP_006345892.1| PREDICTED: RNA-binding protein 42-like isoform X2 [Solanum
tuberosum] gi|565358152|ref|XP_006345893.1| PREDICTED:
RNA-binding protein 42-like isoform X3 [Solanum
tuberosum]
Length = 213
Score = 140 bits (354), Expect(2) = 3e-48
Identities = 77/135 (57%), Positives = 81/135 (60%), Gaps = 6/135 (4%)
Frame = +3
Query: 180 YFPMPFHLQQSVQ------TXXXXXXXXXXXXXXXXXXXXXXXSLPXXXXXXXXXXXXXX 341
YFP PFHLQQ SLP
Sbjct: 16 YFPTPFHLQQQPSQPYIGSAPSPIAPPVVPPVYSAPAAVPDVYSLPQYLQTQQLFQRVVQ 75
Query: 342 TITPEALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCGDLG 521
TITPEA+E+VKAALASSEIE K E KKKAVPRKAAGQTWEDPTLAEWPEND+RLFCG+LG
Sbjct: 76 TITPEAIENVKAALASSEIEQKAEVKKKAVPRKAAGQTWEDPTLAEWPENDFRLFCGNLG 135
Query: 522 NEVNDDVLSKHFPGF 566
NEVNDDVLSK F F
Sbjct: 136 NEVNDDVLSKAFSRF 150
Score = 77.8 bits (190), Expect(2) = 3e-48
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNP+ L AL
Sbjct: 145 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPSDLVVAL 185
>ref|XP_004239744.1| PREDICTED: RNA-binding protein 42-like isoform 1 [Solanum
lycopersicum]
Length = 228
Score = 137 bits (346), Expect(2) = 8e-47
Identities = 74/129 (57%), Positives = 80/129 (62%)
Frame = +3
Query: 180 YFPMPFHLQQSVQTXXXXXXXXXXXXXXXXXXXXXXXSLPXXXXXXXXXXXXXXTITPEA 359
YFP P HLQQ + SLP TITPEA
Sbjct: 16 YFPTPLHLQQQ-PSQPYSAPPVVPPVYSAPAAVPDVYSLPQYLQTQQLFERVAQTITPEA 74
Query: 360 LESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCGDLGNEVNDD 539
+E+VKAALASSE+E K KKKAVPRKAAGQTWEDPTLAEWPEND+RLFCG+LGNEVNDD
Sbjct: 75 IENVKAALASSELEQKAGVKKKAVPRKAAGQTWEDPTLAEWPENDFRLFCGNLGNEVNDD 134
Query: 540 VLSKHFPGF 566
VLSK F F
Sbjct: 135 VLSKAFSRF 143
Score = 76.3 bits (186), Expect(2) = 8e-47
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFNMARVVR+KRTGKTKGYGFVSFSNP+ L AL
Sbjct: 138 KAFSRFPSFNMARVVREKRTGKTKGYGFVSFSNPSDLVVAL 178
>ref|XP_004239745.1| PREDICTED: RNA-binding protein 42-like isoform 2 [Solanum
lycopersicum]
Length = 183
Score = 137 bits (346), Expect(2) = 8e-47
Identities = 74/129 (57%), Positives = 80/129 (62%)
Frame = +3
Query: 180 YFPMPFHLQQSVQTXXXXXXXXXXXXXXXXXXXXXXXSLPXXXXXXXXXXXXXXTITPEA 359
YFP P HLQQ + SLP TITPEA
Sbjct: 16 YFPTPLHLQQQ-PSQPYSAPPVVPPVYSAPAAVPDVYSLPQYLQTQQLFERVAQTITPEA 74
Query: 360 LESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCGDLGNEVNDD 539
+E+VKAALASSE+E K KKKAVPRKAAGQTWEDPTLAEWPEND+RLFCG+LGNEVNDD
Sbjct: 75 IENVKAALASSELEQKAGVKKKAVPRKAAGQTWEDPTLAEWPENDFRLFCGNLGNEVNDD 134
Query: 540 VLSKHFPGF 566
VLSK F F
Sbjct: 135 VLSKAFSRF 143
Score = 76.3 bits (186), Expect(2) = 8e-47
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFNMARVVR+KRTGKTKGYGFVSFSNP+ L AL
Sbjct: 138 KAFSRFPSFNMARVVREKRTGKTKGYGFVSFSNPSDLVVAL 178
>ref|NP_187100.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7547109|gb|AAF63781.1| unknown protein [Arabidopsis
thaliana] gi|26451670|dbj|BAC42931.1| unknown protein
[Arabidopsis thaliana] gi|28973333|gb|AAO63991.1|
putative RRM-containing protein [Arabidopsis thaliana]
gi|332640568|gb|AEE74089.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 245
Score = 139 bits (349), Expect(2) = 1e-46
Identities = 65/75 (86%), Positives = 70/75 (93%)
Frame = +3
Query: 342 TITPEALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCGDLG 521
TITPEALE+VKAALASSE EHK ETKK+A+PRKAAGQ+WEDPTL+EWPENDYRLFCGDLG
Sbjct: 86 TITPEALENVKAALASSETEHKAETKKRAIPRKAAGQSWEDPTLSEWPENDYRLFCGDLG 145
Query: 522 NEVNDDVLSKHFPGF 566
NEVNDDVLSK F F
Sbjct: 146 NEVNDDVLSKAFARF 160
Score = 74.3 bits (181), Expect(2) = 1e-46
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAF+RFP+FNMA+V+RDKRTGKTKGYGFVSF NP LAAAL
Sbjct: 155 KAFARFPTFNMAKVIRDKRTGKTKGYGFVSFLNPADLAAAL 195
>gb|ESW16010.1| hypothetical protein PHAVU_007G122100g [Phaseolus vulgaris]
Length = 244
Score = 131 bits (330), Expect(2) = 5e-46
Identities = 71/138 (51%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Frame = +3
Query: 180 YFPMPFHLQQSVQTXXXXXXXXXXXXXXXXXXXXXXX---------SLPXXXXXXXXXXX 332
YFP+PFHLQQ T S
Sbjct: 22 YFPVPFHLQQPATTHYAAPYVAAPSVQIPAPPVVGPVAPAPVPAVYSAVPQYQAQQLFER 81
Query: 333 XXXTITPEALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCG 512
ITPEALE+VKAA+ASS++EHK + K+KAVPRKAAGQ+WEDP LAEWPE+DYRLFCG
Sbjct: 82 DAQIITPEALENVKAAIASSDVEHKTDAKRKAVPRKAAGQSWEDPILAEWPEDDYRLFCG 141
Query: 513 DLGNEVNDDVLSKHFPGF 566
DLGNEVNDDVLSK F F
Sbjct: 142 DLGNEVNDDVLSKAFSRF 159
Score = 79.7 bits (195), Expect(2) = 5e-46
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFNMARVVRDKRTGKTKGYGFVSF+NP+ LAAAL
Sbjct: 154 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFANPSDLAAAL 194
>ref|XP_003556455.1| PREDICTED: RNA-binding protein 42-like [Glycine max]
Length = 247
Score = 132 bits (332), Expect(2) = 6e-46
Identities = 72/138 (52%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Frame = +3
Query: 180 YFPMPFHLQQSVQTXXXXXXXXXXXXXXXXXXXXXXX---------SLPXXXXXXXXXXX 332
YFP+PFHLQQ T S
Sbjct: 25 YFPVPFHLQQPATTHYAAPYVAAPSVQIPAPPVVGPIAPAPVPGVYSAVPQYQAQQLFER 84
Query: 333 XXXTITPEALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCG 512
ITPEALE+VKAA+ASS++EHK + KKKAVPRKAAGQ WEDP LAEWPE+DYRLFCG
Sbjct: 85 DAQIITPEALENVKAAIASSDVEHKTDAKKKAVPRKAAGQAWEDPILAEWPEDDYRLFCG 144
Query: 513 DLGNEVNDDVLSKHFPGF 566
DLGNEVNDDVLSK F F
Sbjct: 145 DLGNEVNDDVLSKAFSRF 162
Score = 78.6 bits (192), Expect(2) = 6e-46
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFN+ARVVRDKRTGKTKGYGFVSF+NP+ LAAAL
Sbjct: 157 KAFSRFPSFNLARVVRDKRTGKTKGYGFVSFANPSDLAAAL 197
>ref|XP_003536140.1| PREDICTED: RNA-binding protein 42-like [Glycine max]
Length = 248
Score = 130 bits (327), Expect(2) = 3e-45
Identities = 71/138 (51%), Positives = 78/138 (56%), Gaps = 9/138 (6%)
Frame = +3
Query: 180 YFPMPFHLQQSVQTXXXXXXXXXXXXXXXXXXXXXXX---------SLPXXXXXXXXXXX 332
YFP+PFHLQQ T S
Sbjct: 26 YFPVPFHLQQPATTHYAAPYVAAPSVQIPAPPVVGPVAPAPVPGVYSAVPQYQAQQLFER 85
Query: 333 XXXTITPEALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCG 512
ITPEALE+VKAA+ASS++EHK + KKKAVPRKAAG WEDP LAEWPE+DYRLFCG
Sbjct: 86 DAQIITPEALENVKAAIASSDVEHKTDAKKKAVPRKAAGHAWEDPILAEWPEDDYRLFCG 145
Query: 513 DLGNEVNDDVLSKHFPGF 566
DLGNEVNDDVLSK F F
Sbjct: 146 DLGNEVNDDVLSKAFSRF 163
Score = 78.2 bits (191), Expect(2) = 3e-45
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFNMARVVRDKRTGKTKGYGFVSF+NP+ LA AL
Sbjct: 158 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFANPSDLAGAL 198
>ref|XP_003537815.1| PREDICTED: RNA-binding protein 42-like [Glycine max]
Length = 246
Score = 132 bits (332), Expect(2) = 5e-45
Identities = 72/138 (52%), Positives = 80/138 (57%), Gaps = 9/138 (6%)
Frame = +3
Query: 180 YFPMPFHLQQSVQTXXXXXXXXXXXXXXXXXXXXXXX---------SLPXXXXXXXXXXX 332
YFP+PFHLQQ T S
Sbjct: 24 YFPVPFHLQQPATTHYAAPYVAAPSVQIPAPPIVGPVVPAPVAGVYSTVPQYQAQQLFER 83
Query: 333 XXXTITPEALESVKAALASSEIEHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFCG 512
ITPEALE+VKAA+ASS++EHK + KKKAVPRKAAGQ+WEDP LAEWPE+DYRLFCG
Sbjct: 84 DAQIITPEALENVKAAIASSDVEHKADAKKKAVPRKAAGQSWEDPILAEWPEDDYRLFCG 143
Query: 513 DLGNEVNDDVLSKHFPGF 566
DLGNEVNDDVLSK F F
Sbjct: 144 DLGNEVNDDVLSKVFSRF 161
Score = 75.5 bits (184), Expect(2) = 5e-45
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
K FSRFPSFN+ARVVRDKRTGKTKGYGFVSF+NP LAAA+
Sbjct: 156 KVFSRFPSFNLARVVRDKRTGKTKGYGFVSFANPADLAAAV 196
>gb|ACG33680.1| hypothetical protein [Zea mays]
Length = 237
Score = 117 bits (293), Expect(2) = 2e-42
Identities = 66/139 (47%), Positives = 75/139 (53%), Gaps = 10/139 (7%)
Frame = +3
Query: 180 YFPMPFHLQQSVQTXXXXXXXXXXXXXXXXXXXXXXXSLPXXXXXXXXXXXXXXTITPEA 359
YFP+PFHLQQ L TITPEA
Sbjct: 23 YFPLPFHLQQHQPQPQMPPPMAASSYQQYQQQLHQAHQL---------FQRDAQTITPEA 73
Query: 360 LESVKAALASSEI----------EHKQETKKKAVPRKAAGQTWEDPTLAEWPENDYRLFC 509
L+SVKAALA+S++ T KK +PR+AAGQ+WEDPTL +WPENDYRLFC
Sbjct: 74 LQSVKAALATSDVLDPAAAANARPSDPSTSKKPIPRRAAGQSWEDPTLTDWPENDYRLFC 133
Query: 510 GDLGNEVNDDVLSKHFPGF 566
GDLGNEVNDDVLSK F F
Sbjct: 134 GDLGNEVNDDVLSKAFSRF 152
Score = 81.6 bits (200), Expect(2) = 2e-42
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +2
Query: 548 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTGLAAAL 670
KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPT LAAA+
Sbjct: 147 KAFSRFPSFNMARVVRDKRTGKTKGYGFVSFSNPTDLAAAI 187