BLASTX nr result
ID: Jatropha_contig00020518
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00020518
(304 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS74512.1| hypothetical protein M569_00229, partial [Genlise... 119 3e-25
ref|YP_002720149.1| rpl16 [Jatropha curcas] gi|224979601|gb|ACN7... 119 5e-25
ref|XP_004228902.1| PREDICTED: 50S ribosomal protein L16, chloro... 112 4e-23
ref|YP_874690.1| ribosomal protein L16 [Hordeum vulgare subsp. v... 112 6e-23
gb|AGP50868.1| ribosomal protein L16 (chloroplast) [Hordeum vulg... 111 8e-23
ref|YP_007475177.1| ribosomal protein L16 (chloroplast) [Arundin... 111 8e-23
gb|AGP50792.1| ribosomal protein L16 (chloroplast) [Hordeum vulg... 110 1e-22
ref|YP_003097612.1| ribosomal protein L16 [Dendrocalamus latiflo... 110 1e-22
ref|YP_008081403.1| ribosomal protein L16 (chloroplast) [Tetrace... 110 2e-22
ref|YP_001294222.1| ribosomal protein L16 [Buxus microphylla] gi... 110 2e-22
gb|AGC38282.1| ribosomal protein L16 (chloroplast) [Cryptochloa ... 110 2e-22
ref|YP_008239268.1| ribosomal protein L16 (chloroplast) [Triticu... 109 3e-22
ref|YP_006665818.1| ribosomal protein L16 (chloroplast) [Elodea ... 109 4e-22
ref|YP_008080532.1| ribosomal protein L16 (chloroplast) [Pharus ... 108 5e-22
gb|AEX94510.1| ribosomal protein L16 (chloroplast) [Agapanthus a... 108 5e-22
ref|YP_005088047.1| rpl16 gene product [Leersia tisserantii] gi|... 108 5e-22
ref|YP_001294308.1| ribosomal protein L16 [Illicium oligandrum] ... 108 5e-22
gb|AEX94534.1| ribosomal protein L16 (chloroplast) [Phormium tenax] 108 7e-22
gb|ADD30324.1| ribosomal protein L16 [Meliosma aff. cuneifolia M... 108 7e-22
ref|YP_001294136.1| ribosomal protein L16 [Chloranthus spicatus]... 108 7e-22
>gb|EPS74512.1| hypothetical protein M569_00229, partial [Genlisea aurea]
Length = 153
Score = 119 bits (299), Expect = 3e-25
Identities = 61/92 (66%), Positives = 71/92 (77%)
Frame = +2
Query: 29 EETLMSGSVVEMEWL**RWA*ETSVTSNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQ 208
+ETL+S SVVEME+ ET++ NP R RFRKQ RGRMKG ++R N I FG+YALQ
Sbjct: 1 DETLISSSVVEMEF-------ETTINYNPKRTRFRKQHRGRMKGMSYRGNHICFGKYALQ 53
Query: 209 ALEPSWITSRLIEAGRRTMTRYARRGG*IWIR 304
ALEP+WITSR IEAGRR MTR ARRGG IW+R
Sbjct: 54 ALEPAWITSRQIEAGRRAMTRNARRGGKIWVR 85
>ref|YP_002720149.1| rpl16 [Jatropha curcas] gi|224979601|gb|ACN72728.1| rpl16 [Jatropha
curcas]
Length = 135
Score = 119 bits (297), Expect = 5e-25
Identities = 59/65 (90%), Positives = 60/65 (92%)
Frame = +2
Query: 110 NPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYARRGG 289
+P RPRFRKQ RGRMKGKAFRANRISFGRYALQALEPSWITSR IEAGRRTMTR ARRGG
Sbjct: 3 SPQRPRFRKQHRGRMKGKAFRANRISFGRYALQALEPSWITSRQIEAGRRTMTRNARRGG 62
Query: 290 *IWIR 304
IWIR
Sbjct: 63 KIWIR 67
>ref|XP_004228902.1| PREDICTED: 50S ribosomal protein L16, chloroplastic-like [Solanum
lycopersicum]
Length = 229
Score = 112 bits (281), Expect = 4e-23
Identities = 56/86 (65%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Frame = +2
Query: 53 VVEMEWL**--RWA*ETSVTSNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSW 226
+ +EW+ RW E ++ NP R RFRKQ RGRMKG ++R NRISFG+YALQALEP+W
Sbjct: 77 IARVEWIREGRRWNSEPTINYNPKRTRFRKQHRGRMKGISYRGNRISFGKYALQALEPAW 136
Query: 227 ITSRLIEAGRRTMTRYARRGG*IWIR 304
ITSR IEAGRR MTR ARRGG IW+R
Sbjct: 137 ITSRQIEAGRRAMTRNARRGGKIWVR 162
>ref|YP_874690.1| ribosomal protein L16 [Hordeum vulgare subsp. vulgare]
gi|215275567|sp|A1E9M8.1|RK16_HORVU RecName: Full=50S
ribosomal protein L16, chloroplastic
gi|118201078|gb|ABK79449.1| ribosomal protein L16
[Hordeum vulgare subsp. vulgare]
Length = 137
Score = 112 bits (279), Expect = 6e-23
Identities = 53/66 (80%), Positives = 58/66 (87%)
Frame = +2
Query: 107 SNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYARRG 286
SNP R RFRKQ RGRMKGK+FR NRI FGRYALQALEP+WIT+R IEAGRR +TRYARRG
Sbjct: 3 SNPKRTRFRKQHRGRMKGKSFRGNRICFGRYALQALEPAWITARQIEAGRRAITRYARRG 62
Query: 287 G*IWIR 304
G IW+R
Sbjct: 63 GKIWVR 68
>gb|AGP50868.1| ribosomal protein L16 (chloroplast) [Hordeum vulgare subsp.
spontaneum] gi|521301146|gb|AGP50947.1| ribosomal
protein L16 (chloroplast) [Hordeum vulgare subsp.
spontaneum]
Length = 151
Score = 111 bits (278), Expect = 8e-23
Identities = 58/88 (65%), Positives = 66/88 (75%)
Frame = +2
Query: 41 MSGSVVEMEWL**RWA*ETSVTSNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEP 220
MS VEME + ++ NP R RFRKQ RGRMKGK+FR NRI FGRYALQALEP
Sbjct: 1 MSSFGVEMELR------KRTIDYNPKRTRFRKQHRGRMKGKSFRGNRICFGRYALQALEP 54
Query: 221 SWITSRLIEAGRRTMTRYARRGG*IWIR 304
+WIT+R IEAGRR +TRYARRGG IW+R
Sbjct: 55 AWITARQIEAGRRAITRYARRGGKIWVR 82
>ref|YP_007475177.1| ribosomal protein L16 (chloroplast) [Arundinaria gigantea]
gi|441480287|gb|AGC38199.1| ribosomal protein L16
(chloroplast) [Arundinaria gigantea]
Length = 137
Score = 111 bits (278), Expect = 8e-23
Identities = 54/66 (81%), Positives = 57/66 (86%)
Frame = +2
Query: 107 SNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYARRG 286
SNP R RFRKQ RGRMKGK+ R NRI FGRYALQALEP+WITSR IEAGRR MTRYARRG
Sbjct: 3 SNPKRTRFRKQHRGRMKGKSCRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRYARRG 62
Query: 287 G*IWIR 304
G IW+R
Sbjct: 63 GKIWVR 68
>gb|AGP50792.1| ribosomal protein L16 (chloroplast) [Hordeum vulgare subsp.
vulgare]
Length = 144
Score = 110 bits (276), Expect = 1e-22
Identities = 52/69 (75%), Positives = 59/69 (85%)
Frame = +2
Query: 98 SVTSNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYA 277
++ NP R RFRKQ RGRMKGK+FR NRI FGRYALQALEP+WIT+R IEAGRR +TRYA
Sbjct: 7 TIDYNPKRTRFRKQHRGRMKGKSFRGNRICFGRYALQALEPAWITARQIEAGRRAITRYA 66
Query: 278 RRGG*IWIR 304
RRGG IW+R
Sbjct: 67 RRGGKIWVR 75
>ref|YP_003097612.1| ribosomal protein L16 [Dendrocalamus latiflorus]
gi|255099163|gb|ACT99956.1| ribosomal protein L16
[Dendrocalamus latiflorus]
Length = 139
Score = 110 bits (276), Expect = 1e-22
Identities = 53/66 (80%), Positives = 57/66 (86%)
Frame = +2
Query: 107 SNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYARRG 286
SNP R RFRKQ RGRMKGK+ R NRI FGRYALQALEP+WITSR IEAGRR MTRYARRG
Sbjct: 3 SNPKRTRFRKQHRGRMKGKSCRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRYARRG 62
Query: 287 G*IWIR 304
G +W+R
Sbjct: 63 GKLWVR 68
>ref|YP_008081403.1| ribosomal protein L16 (chloroplast) [Tetracentron sinense]
gi|511348505|ref|YP_008081433.1| ribosomal protein L16
(chloroplast) [Tetracentron sinense]
gi|511348569|ref|YP_008081495.1| ribosomal protein L16
(chloroplast) [Trochodendron aralioides]
gi|511348598|ref|YP_008081524.1| ribosomal protein L16
(chloroplast) [Trochodendron aralioides]
gi|479279241|gb|AGJ72095.1| ribosomal protein L16
(chloroplast) [Tetracentron sinense]
gi|479279270|gb|AGJ72124.1| ribosomal protein L16
(chloroplast) [Tetracentron sinense]
gi|479279334|gb|AGJ72187.1| ribosomal protein L16
(chloroplast) [Trochodendron aralioides]
gi|479279363|gb|AGJ72216.1| ribosomal protein L16
(chloroplast) [Trochodendron aralioides]
Length = 136
Score = 110 bits (275), Expect = 2e-22
Identities = 53/66 (80%), Positives = 57/66 (86%)
Frame = +2
Query: 107 SNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYARRG 286
SNP R RFRKQ RGRMKG ++R NRI FGRYALQALEP+WITSR IEAGRR MTRYARRG
Sbjct: 3 SNPKRTRFRKQHRGRMKGISYRGNRICFGRYALQALEPTWITSRQIEAGRRAMTRYARRG 62
Query: 287 G*IWIR 304
G IW+R
Sbjct: 63 GKIWVR 68
>ref|YP_001294222.1| ribosomal protein L16 [Buxus microphylla]
gi|215275549|sp|A6MM74.1|RK16_BUXMI RecName: Full=50S
ribosomal protein L16, chloroplastic
gi|146762322|gb|ABQ45286.1| ribosomal protein L16 [Buxus
microphylla]
Length = 136
Score = 110 bits (275), Expect = 2e-22
Identities = 53/66 (80%), Positives = 57/66 (86%)
Frame = +2
Query: 107 SNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYARRG 286
SNP R RFRKQ RGRMKG ++R NRI FGRYALQALEP+WITSR IEAGRR MTRYARRG
Sbjct: 3 SNPKRTRFRKQHRGRMKGISYRGNRICFGRYALQALEPTWITSRQIEAGRRAMTRYARRG 62
Query: 287 G*IWIR 304
G IW+R
Sbjct: 63 GKIWVR 68
>gb|AGC38282.1| ribosomal protein L16 (chloroplast) [Cryptochloa strictiflora]
Length = 137
Score = 110 bits (274), Expect = 2e-22
Identities = 52/66 (78%), Positives = 57/66 (86%)
Frame = +2
Query: 107 SNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYARRG 286
SNP R RFRKQ RGRMKGK++R +RI FGRYALQ LEP+WITSR IEAGRR MTRYARRG
Sbjct: 3 SNPKRTRFRKQHRGRMKGKSYRGSRICFGRYALQTLEPAWITSRQIEAGRRAMTRYARRG 62
Query: 287 G*IWIR 304
G IW+R
Sbjct: 63 GKIWVR 68
>ref|YP_008239268.1| ribosomal protein L16 (chloroplast) [Triticum urartu]
gi|521301445|gb|AGP51242.1| ribosomal protein L16
(chloroplast) [Triticum urartu]
Length = 151
Score = 109 bits (273), Expect = 3e-22
Identities = 57/88 (64%), Positives = 65/88 (73%)
Frame = +2
Query: 41 MSGSVVEMEWL**RWA*ETSVTSNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEP 220
MS VEME + ++ NP R RFRKQ RGRMKGK+ R NRI FGRYALQALEP
Sbjct: 1 MSSFAVEMELR------KRTIDYNPKRTRFRKQHRGRMKGKSCRGNRICFGRYALQALEP 54
Query: 221 SWITSRLIEAGRRTMTRYARRGG*IWIR 304
+WIT+R IEAGRR +TRYARRGG IW+R
Sbjct: 55 AWITARQIEAGRRAITRYARRGGKIWVR 82
>ref|YP_006665818.1| ribosomal protein L16 (chloroplast) [Elodea canadensis]
gi|374094635|gb|AEY84691.1| ribosomal protein L16
(chloroplast) [Elodea canadensis]
Length = 136
Score = 109 bits (272), Expect = 4e-22
Identities = 53/66 (80%), Positives = 57/66 (86%)
Frame = +2
Query: 107 SNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYARRG 286
SNP R RFRKQ RGRMKG + R NRISFGRYALQALEP+WIT+R IEAGRR MTRYARRG
Sbjct: 3 SNPKRTRFRKQHRGRMKGISSRGNRISFGRYALQALEPAWITARQIEAGRRAMTRYARRG 62
Query: 287 G*IWIR 304
G IW+R
Sbjct: 63 GKIWVR 68
>ref|YP_008080532.1| ribosomal protein L16 (chloroplast) [Pharus latifolius]
gi|336280831|gb|AEI29119.1| ribosomal protein L16
(chloroplast) [Pharus latifolius]
Length = 136
Score = 108 bits (271), Expect = 5e-22
Identities = 52/65 (80%), Positives = 56/65 (86%)
Frame = +2
Query: 110 NPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYARRGG 289
NP R RFRKQ RGRMKGK+ R NRI FGRYALQALEP+WIT+R IEAGRR MTRYARRGG
Sbjct: 3 NPKRTRFRKQHRGRMKGKSCRGNRICFGRYALQALEPAWITARQIEAGRRAMTRYARRGG 62
Query: 290 *IWIR 304
IW+R
Sbjct: 63 KIWVR 67
>gb|AEX94510.1| ribosomal protein L16 (chloroplast) [Agapanthus africanus]
Length = 139
Score = 108 bits (271), Expect = 5e-22
Identities = 53/69 (76%), Positives = 57/69 (82%)
Frame = +2
Query: 98 SVTSNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYA 277
S+ NP R RFRKQ RGRMKG + R NRI FGRYALQALEPSWIT+R IEAGRR MTRYA
Sbjct: 3 SINYNPKRTRFRKQHRGRMKGISCRGNRICFGRYALQALEPSWITARQIEAGRRAMTRYA 62
Query: 278 RRGG*IWIR 304
RRGG IW+R
Sbjct: 63 RRGGKIWVR 71
>ref|YP_005088047.1| rpl16 gene product [Leersia tisserantii]
gi|374249657|ref|YP_005089184.1| rpl16 gene product
[Rhynchoryza subulata] gi|346228341|gb|AEO21215.1|
ribosomal protein L16 [Leersia tisserantii]
gi|346228509|gb|AEO21381.1| ribosomal protein L16
[Rhynchoryza subulata]
Length = 136
Score = 108 bits (271), Expect = 5e-22
Identities = 51/65 (78%), Positives = 57/65 (87%)
Frame = +2
Query: 110 NPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYARRGG 289
+P R RFRKQ RGRMKGK++R NRI FGRYALQALEP+WIT+R IEAGRR MTRYARRGG
Sbjct: 3 SPKRTRFRKQHRGRMKGKSYRGNRICFGRYALQALEPTWITARQIEAGRRAMTRYARRGG 62
Query: 290 *IWIR 304
IW+R
Sbjct: 63 KIWVR 67
>ref|YP_001294308.1| ribosomal protein L16 [Illicium oligandrum]
gi|215275568|sp|A6MMY2.1|RK16_ILLOL RecName: Full=50S
ribosomal protein L16, chloroplastic
gi|147917432|gb|ABQ52556.1| ribosomal protein L16
[Illicium oligandrum]
Length = 136
Score = 108 bits (271), Expect = 5e-22
Identities = 52/66 (78%), Positives = 56/66 (84%)
Frame = +2
Query: 107 SNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYARRG 286
SNP R RFRKQ RGRMKG ++R N I FGRYALQALEP+WITSR IEAGRR MTRYARRG
Sbjct: 3 SNPKRTRFRKQHRGRMKGVSYRGNHICFGRYALQALEPAWITSRQIEAGRRAMTRYARRG 62
Query: 287 G*IWIR 304
G IW+R
Sbjct: 63 GRIWVR 68
>gb|AEX94534.1| ribosomal protein L16 (chloroplast) [Phormium tenax]
Length = 139
Score = 108 bits (270), Expect = 7e-22
Identities = 52/69 (75%), Positives = 58/69 (84%)
Frame = +2
Query: 98 SVTSNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYA 277
S+ NP R RFRKQ RGRMKG + R NRISFG+YALQALEP+WIT+R IEAGRR MTRYA
Sbjct: 3 SINYNPKRTRFRKQHRGRMKGISCRGNRISFGKYALQALEPTWITARQIEAGRRAMTRYA 62
Query: 278 RRGG*IWIR 304
RRGG IW+R
Sbjct: 63 RRGGKIWVR 71
>gb|ADD30324.1| ribosomal protein L16 [Meliosma aff. cuneifolia Moore 333]
Length = 135
Score = 108 bits (270), Expect = 7e-22
Identities = 52/65 (80%), Positives = 57/65 (87%)
Frame = +2
Query: 110 NPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYARRGG 289
+P R RFRKQ RGRMKGK++R +RI FGRYALQALEP+WITSR IEAGRR MTRYARRGG
Sbjct: 3 SPKRTRFRKQHRGRMKGKSYRGSRICFGRYALQALEPAWITSRQIEAGRRAMTRYARRGG 62
Query: 290 *IWIR 304
IWIR
Sbjct: 63 KIWIR 67
>ref|YP_001294136.1| ribosomal protein L16 [Chloranthus spicatus]
gi|215275553|sp|A6MMG0.1|RK16_CHLSC RecName: Full=50S
ribosomal protein L16, chloroplastic
gi|146744225|gb|ABQ43297.1| ribosomal protein L16
[Chloranthus spicatus]
Length = 136
Score = 108 bits (270), Expect = 7e-22
Identities = 52/66 (78%), Positives = 56/66 (84%)
Frame = +2
Query: 107 SNPLRPRFRKQLRGRMKGKAFRANRISFGRYALQALEPSWITSRLIEAGRRTMTRYARRG 286
SNP R RFRKQ RGRMKG ++R N I FGRYALQALEP+WITSR IEAGRR MTRYARRG
Sbjct: 3 SNPKRTRFRKQHRGRMKGISYRGNNICFGRYALQALEPAWITSRQIEAGRRAMTRYARRG 62
Query: 287 G*IWIR 304
G IW+R
Sbjct: 63 GKIWVR 68