BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00020292
         (708 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...   115   5e-37
gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t...   120   3e-35
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   121   5e-35
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             118   2e-34
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]   117   6e-34
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A...   100   1e-32
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   117   7e-32
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    97   1e-31
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   106   2e-31
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    92   2e-31
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    92   2e-31
gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo...    93   4e-31
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe...    87   6e-31
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    89   8e-31
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    91   8e-31
gb|EMJ14194.1| hypothetical protein PRUPE_ppa022768mg, partial [...    94   1e-30
ref|XP_004305156.1| PREDICTED: putative ribonuclease H protein A...    91   1e-30
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    91   1e-30
gb|EPS73861.1| hypothetical protein M569_00896, partial [Genlise...    86   2e-30
gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indi...    90   2e-30

>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score =  115 bits (289), Expect(2) = 5e-37
 Identities = 56/122 (45%), Positives = 77/122 (63%)
 Frame = +2

Query: 68  ADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKDILRSRLHGWGTRWLSRTSREVL 247
           + I++ L   + +G G YLGLPS++G NK  IF +LKD +  +   W  R LSR  +EVL
Sbjct: 264 SSITASLGVHNNIGSGKYLGLPSMVGRNKNAIFSYLKDRIWKKCQSWSVRSLSRADKEVL 323

Query: 248 IKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGKNEGRRGINWLARDKMSSHKREG 427
           IKSVA  IP Y M  FL+P ++C +++  MN F W  K  GRRGINW+  D ++ HK  G
Sbjct: 324 IKSVAQAIPSYCMGAFLIPASLCEELERMMNSFYWGSKKNGRRGINWMRWDFLTLHKSLG 383

Query: 428 GM 433
           G+
Sbjct: 384 GL 385



 Score = 65.5 bits (158), Expect(2) = 5e-37
 Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
 Frame = +1

Query: 427 GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLG--- 597
           G  FR+L  FN ++L KQGW+LL+D+S+L  RI KAKYF R  FL        A LG   
Sbjct: 384 GLGFRNLEAFNLSMLGKQGWKLLSDSSSLFTRILKAKYFPRRDFLD-------ATLGHNP 436

Query: 598 -----KVFCLLEIY*NGIRWRVGNGRNILVTKDPWIPSTILL 708
                 ++    +   G RW++G+G  I V   PWI + + L
Sbjct: 437 SYTWRSLWSTQSLLTLGHRWKIGDGSKINVWSMPWIRNLLSL 478


>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
          Length = 405

 Score =  120 bits (302), Expect(2) = 3e-35
 Identities = 62/149 (41%), Positives = 90/149 (60%)
 Frame = +2

Query: 2   GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKD 181
           GQ +N  K ++ FS N+SG  + D+S I+   H +G G YLGLPS+I  +K  +F F+KD
Sbjct: 99  GQEINLSKSEVFFSRNMSGAAQEDLSRIIGVRHVMGTGKYLGLPSMIDRDKWSVFSFIKD 158

Query: 182 ILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGK 361
            +  R++ W  R LS+  +EV+IKSV   IP Y MS++LLP++V   ++  +N F W G 
Sbjct: 159 SIWKRINVWRGRALSKAGKEVMIKSVLQSIPSYIMSIYLLPSSVIDDIEKMVNAF-WWGG 217

Query: 362 NEGRRGINWLARDKMSSHKREGGMSLGIF 448
               RGI W+A + M+  K  GGM    F
Sbjct: 218 RSNNRGIKWMAWEHMACPKEFGGMGFRNF 246



 Score = 54.7 bits (130), Expect(2) = 3e-35
 Identities = 31/88 (35%), Positives = 43/88 (48%)
 Frame = +1

Query: 427 GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLGKVF 606
           G  FR+   FN A++ KQGW LL+   +LV R+FK++YF R  FL               
Sbjct: 240 GMGFRNFKAFNIAMVAKQGWSLLSTPESLVARVFKSRYFPRSSFL--------------- 284

Query: 607 CLLEIY*NGIRWRVGNGRNILVTKDPWI 690
                   G +  VGNG+ + V  DPW+
Sbjct: 285 --------GAKL-VGNGQQVSVMNDPWV 303


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  121 bits (304), Expect(2) = 5e-35
 Identities = 63/145 (43%), Positives = 92/145 (63%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGG-GNYLGLPSLIGHNKCQIFGFLK 178
           GQ +NF K  I F   +   +KADI  IL   H LGG G+YLGLP  +G +K ++F F++
Sbjct: 495 GQQINFSKSSIQFGHKVEDSIKADIKLIL-GIHNLGGMGSYLGLPESLGGSKTKVFSFVR 553

Query: 179 DILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIG 358
           D L+SR++GW  ++LS+  +EV+IKSVA  +P Y MS F LP  +  K+   + +F W  
Sbjct: 554 DRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVAKF-WWS 612

Query: 359 KNEGRRGINWLARDKMSSHKREGGM 433
            N   RG++W+A DK+ S K +GG+
Sbjct: 613 SNGDSRGMHWMAWDKLCSSKSDGGL 637



 Score = 53.1 bits (126), Expect(2) = 5e-35
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +1

Query: 427 GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIAL-LGKV 603
           G  FR++  FN+A+L KQ WRL+T   +L  ++FK +YF +   L    +   +     +
Sbjct: 636 GLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSPSYGWRSM 695

Query: 604 FCLLEIY*NGIRWRVGNGRNILVTKDPWIPS 696
                +   G+  RVG+G +I V  DPWIP+
Sbjct: 696 ISARSLVYKGLIKRVGSGASISVWNDPWIPA 726


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  118 bits (296), Expect(2) = 2e-34
 Identities = 61/145 (42%), Positives = 93/145 (64%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGG-GNYLGLPSLIGHNKCQIFGFLK 178
           GQ +NF K  I F   +   +KA+I S L   H +GG G+YLGLP  +G +K +IF F++
Sbjct: 561 GQMINFSKSSIQFGHKVGDDIKAEIKSAL-GIHSIGGMGSYLGLPESLGGSKTRIFSFVR 619

Query: 179 DILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIG 358
           D L++R++GW  ++LS+  +EV+IKSV  V+P Y MS F LP T+  K+   + +F W  
Sbjct: 620 DRLQTRINGWSAKFLSKGGKEVMIKSVVAVLPTYVMSCFRLPKTITSKLTSAVAKFWWSS 679

Query: 359 KNEGRRGINWLARDKMSSHKREGGM 433
             E  RG++W+A +K+ S K +GG+
Sbjct: 680 DGES-RGMHWMAWNKLCSSKADGGL 703



 Score = 53.9 bits (128), Expect(2) = 2e-34
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
 Frame = +1

Query: 427 GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIAL-LGKV 603
           G  FR ++ FN+A+L KQ WRL+T   +L  ++FK +YF +   L    +   +     +
Sbjct: 702 GLGFRSVNDFNSALLAKQLWRLITVPDSLFAKVFKGRYFRKSNPLDKLKSYSPSYGWRSI 761

Query: 604 FCLLEIY*NGIRWRVGNGRNILVTKDPWIPS 696
                +   G+  RVG+G +I V +DPWIP+
Sbjct: 762 ISARSLVKKGLINRVGSGASISVWEDPWIPA 792


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score =  117 bits (292), Expect(3) = 6e-34
 Identities = 64/134 (47%), Positives = 85/134 (63%)
 Frame = +2

Query: 32  ILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKDILRSRLHGWG 211
           I FS N S + +  IS+IL    PL  G YLGL SLIG +K  +FGFL+D L  RL GW 
Sbjct: 122 IFFSKNASSLDRDFISNILGVSTPLNTGRYLGLLSLIGKSKRVVFGFLRDRLWRRLQGWQ 181

Query: 212 TRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGKNEGRRGINWL 391
           ++ LS+  +++LIK V   IP Y MS FLLP ++  ++Q  MN F W  K++G R INWL
Sbjct: 182 SKLLSQAGKKILIKVVGQAIPSYCMSTFLLPISLSEELQKMMNSFWWGPKSDGGRRINWL 241

Query: 392 ARDKMSSHKREGGM 433
           + DK+   K EGG+
Sbjct: 242 SWDKLCLRKEEGGL 255



 Score = 46.2 bits (108), Expect(3) = 6e-34
 Identities = 22/48 (45%), Positives = 30/48 (62%)
 Frame = +1

Query: 418 EGRGYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFL 561
           E  G  FR+L  FN A+L KQGW L+T   +L+ R+ KA+Y+    FL
Sbjct: 251 EEGGLGFRNLRDFNLAMLGKQGWNLITKPDSLIARLLKARYYCSRDFL 298



 Score = 28.1 bits (61), Expect(3) = 6e-34
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 552 DFFTAILDSNYSFTWQSVLSFRDLLKRD 635
           DF +A L  N SFTW+ + S + +L +D
Sbjct: 296 DFLSARLSHNPSFTWKGIWSSQAILLKD 323


>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 1152

 Score = 99.8 bits (247), Expect(2) = 1e-32
 Identities = 55/144 (38%), Positives = 84/144 (58%)
 Frame = +2

Query: 2   GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKD 181
           GQ +N++K  + FS N+    + D++++L          YLGLP+ + ++K + F +L D
Sbjct: 469 GQQINYEKSSVSFSRNVPLWKQHDLAAVLGVQRVENHEKYLGLPTELSYSKDEAFRYLID 528

Query: 182 ILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGK 361
            +R R  GW  + LS   +EVL+K+V   IP Y MS F LP  +C +M   M RF W G+
Sbjct: 529 RVRKRTQGWRDKTLSGVGKEVLLKAVIQSIPTYVMSCFELPRHLCNEMHQLMARF-WWGE 587

Query: 362 NEGRRGINWLARDKMSSHKREGGM 433
               R I+W+A DK+ S K+EGG+
Sbjct: 588 FGDERKIHWIAWDKLCSSKKEGGL 611



 Score = 67.0 bits (162), Expect(2) = 1e-32
 Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
 Frame = +1

Query: 427 GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLGKVF 606
           G  FRD+H FN A+L KQGWR+L    +L+ ++ K KYF     +Q       A +GK  
Sbjct: 610 GLGFRDMHVFNKALLAKQGWRMLCRPQSLLAQVLKMKYFPTSSLIQ-------AEVGKRI 662

Query: 607 CL--------LEIY*NGIRWRVGNGRNILVTKDPWIP 693
                      E+   G+R++VGNG NI +  DPW+P
Sbjct: 663 SYSWRSLMRGKELLQQGLRFQVGNGENIHLWDDPWLP 699


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score =  117 bits (293), Expect(2) = 7e-32
 Identities = 62/143 (43%), Positives = 92/143 (64%)
 Frame = +2

Query: 5   QSMNFQKLDILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKDI 184
           Q +N QK +I FS N+    K  +S++L     +G   YLGLPS+IG +K  IF ++KD 
Sbjct: 304 QLINMQKSEIYFSRNVPVTKKNTLSNMLWVSEGIGIRKYLGLPSMIGRSKKSIFNYIKDR 363

Query: 185 LRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGKN 364
           + +R+ G  ++ LS+  +EVLIKSVA  IP Y MSVFLLP+++   ++  +N F W  KN
Sbjct: 364 IWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFLLPHSIADDIEKMLNSFWWGMKN 423

Query: 365 EGRRGINWLARDKMSSHKREGGM 433
           EGR GI W++ ++++  K  GGM
Sbjct: 424 EGRGGIRWMSWERLTMRKEWGGM 446



 Score = 46.6 bits (109), Expect(2) = 7e-32
 Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
 Frame = +1

Query: 418 EGRGYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLG 597
           E  G  FR +H F+ A+  KQ W  LT+   +V RIFKAKYF+   FL        A LG
Sbjct: 442 EWGGMGFRHIHGFDLAMSGKQCWNFLTNPDAMVSRIFKAKYFTNENFLG-------ASLG 494

Query: 598 --------KVFCLLEIY*NGIRWRVGNG 657
                    ++        G +WR+G+G
Sbjct: 495 HNPSYVWRSIWSSRIFLKTGYQWRIGDG 522


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 96.7 bits (239), Expect(2) = 1e-31
 Identities = 53/144 (36%), Positives = 83/144 (57%)
 Frame = +2

Query: 2    GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKD 181
            GQ +N+ K ++ FS  +S   K ++S+IL+         YLG+PS+ G ++  IF  L D
Sbjct: 715  GQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERHMKYLGIPSITGRSRTAIFDSLMD 774

Query: 182  ILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGK 361
             +  +L GW  + LSR  +E+L+KSV   IP Y M V+ LP ++ +K+   M RF W G 
Sbjct: 775  RIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYKLPCSIIQKIHSAMARF-WWGS 833

Query: 362  NEGRRGINWLARDKMSSHKREGGM 433
            ++ +R I+W   D + + K  GGM
Sbjct: 834  SDTQRRIHWKNWDSLCTLKCFGGM 857



 Score = 66.6 bits (161), Expect(2) = 1e-31
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = +1

Query: 427  GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLGK-V 603
            G  FRDL  FN A+L +Q WRL+ +  +L+ R+ KAKY+S   FL     V  +   + +
Sbjct: 856  GMGFRDLRVFNDALLGRQAWRLVREPHSLLARVMKAKYYSNHDFLDAPLGVSTSYSWRSI 915

Query: 604  FCLLEIY*NGIRWRVGNGRNILVTKDPWI 690
            +    +   G+ WR+GNG N+ + +DPW+
Sbjct: 916  WSSKALLKEGMVWRIGNGTNVRIWEDPWV 944


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  106 bits (264), Expect(2) = 2e-31
 Identities = 55/144 (38%), Positives = 83/144 (57%)
 Frame = +2

Query: 2   GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKD 181
           GQ +N  K  + FS N   ++K  I SIL+       G YLG+P+++G NK Q+F F++ 
Sbjct: 179 GQEINLNKSALTFSRNTDDVVKRGICSILQVEEXADPGIYLGMPAVVGKNKRQLFEFVRR 238

Query: 182 ILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGK 361
            + +R+  W  R LSR  +E+ +K+VA  IP Y M + LLP  +CR ++  MN F W   
Sbjct: 239 KVWNRIQNWNGRRLSRAGKEICLKTVAQSIPTYVMQLLLLPKDLCRDIESMMNGFFW-DS 297

Query: 362 NEGRRGINWLARDKMSSHKREGGM 433
           N   R I W++  KM   K++GG+
Sbjct: 298 NPQCRSIRWMSWGKMCKQKKDGGL 321



 Score = 56.6 bits (135), Expect(2) = 2e-31
 Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
 Frame = +1

Query: 427 GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLG--- 597
           G  FR L  FN A+L KQGWR L +  +LV RIF+A+YF    FL        A LG   
Sbjct: 320 GLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFLN-------AELGSNP 372

Query: 598 -----KVFCLLEIY*NGIRWRVGNGRNILVTKDPWIPST 699
                 +     +   G  W + +G  + V  D W+P +
Sbjct: 373 SYMWRSILAAQGLLKRGCYWSIASGTKVQVWGDSWLPDS 411


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 92.4 bits (228), Expect(2) = 2e-31
 Identities = 47/144 (32%), Positives = 82/144 (56%)
 Frame = +2

Query: 2    GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKD 181
            GQ +N  K  ++FSPN S + K  + + L          YLGLP  +G ++ +IF +LK+
Sbjct: 912  GQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKE 971

Query: 182  ILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGK 361
             +  R+ GW  + LSR  +E+LIK+VA VIP + M  F L   +C ++   + ++ W  +
Sbjct: 972  RIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQ 1031

Query: 362  NEGRRGINWLARDKMSSHKREGGM 433
             +  + ++WL+ +K++  K  GG+
Sbjct: 1032 EKDNK-MHWLSWNKLTLPKNMGGL 1054



 Score = 70.1 bits (170), Expect(2) = 2e-31
 Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +1

Query: 427  GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLGK-V 603
            G  FRD++ FN A+L KQGWRL+ D  +L  R+ +AKYF  G   +   T  ++   + +
Sbjct: 1053 GLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSI 1112

Query: 604  FCLLEIY*NGIRWRVGNGRNILVTKDPWIP 693
               L +  NG+ WRVG+G  I +  DPWIP
Sbjct: 1113 QKGLRVLQNGMIWRVGDGSKINIWADPWIP 1142


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score = 92.4 bits (228), Expect(2) = 2e-31
 Identities = 47/144 (32%), Positives = 82/144 (56%)
 Frame = +2

Query: 2    GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKD 181
            GQ +N  K  ++FSPN S + K  + + L          YLGLP  +G ++ +IF +LK+
Sbjct: 908  GQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKE 967

Query: 182  ILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGK 361
             +  R+ GW  + LSR  +E+LIK+VA VIP + M  F L   +C ++   + ++ W  +
Sbjct: 968  RIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQ 1027

Query: 362  NEGRRGINWLARDKMSSHKREGGM 433
             +  + ++WL+ +K++  K  GG+
Sbjct: 1028 EKDNK-MHWLSWNKLTLPKNMGGL 1050



 Score = 70.1 bits (170), Expect(2) = 2e-31
 Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +1

Query: 427  GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLGK-V 603
            G  FRD++ FN A+L KQGWRL+ D  +L  R+ +AKYF  G   +   T  ++   + +
Sbjct: 1049 GLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSI 1108

Query: 604  FCLLEIY*NGIRWRVGNGRNILVTKDPWIP 693
               L +  NG+ WRVG+G  I +  DPWIP
Sbjct: 1109 QKGLRVLQNGMIWRVGDGSKINIWADPWIP 1138


>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
          Length = 615

 Score = 93.2 bits (230), Expect(2) = 4e-31
 Identities = 51/144 (35%), Positives = 80/144 (55%)
 Frame = +2

Query: 2   GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKD 181
           GQ++N  K  I+FS N + + K ++ + L          YLGLP  +G ++ Q F +LKD
Sbjct: 167 GQTINKDKSTIMFSKNSTTVEKENVMAGLGIQSEARNEKYLGLPIYMGRSRSQTFSYLKD 226

Query: 182 ILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGK 361
            +  RL GW  R LS+  +E+LIKSV   IP Y MS F L  T+C ++   + RF W  +
Sbjct: 227 RVWKRLQGWKERLLSKAGKEILIKSVVQSIPTYAMSCFDLTKTLCNELGSLVCRF-WWAQ 285

Query: 362 NEGRRGINWLARDKMSSHKREGGM 433
            E    ++W++ + +   K +GG+
Sbjct: 286 QENENKVHWVSWELLCRRKEQGGI 309



 Score = 68.6 bits (166), Expect(2) = 4e-31
 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
 Frame = +1

Query: 418 EGRGYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLG 597
           E  G  +RDLH FN A+L +QGWRL+ +  +L  ++ +AKYF  G  + +     I+   
Sbjct: 305 EQGGIGYRDLHLFNLAMLARQGWRLIMEPMSLCAQVLRAKYFPTGDLMAVREKPGISYSW 364

Query: 598 K-VFCLLEIY*NGIRWRVGNGRNILVTKDPWIPSTI 702
           + +   ++    G+ WRVG+G NI +  DPW+PS I
Sbjct: 365 RSIVRGIQALKKGLIWRVGDGTNIDIWHDPWLPSGI 400


>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
          Length = 992

 Score = 87.4 bits (215), Expect(2) = 6e-31
 Identities = 54/147 (36%), Positives = 77/147 (52%), Gaps = 3/147 (2%)
 Frame = +2

Query: 2   GQSMNFQKLDILFSPNL---SGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGF 172
           GQ +NFQK  + FS N+     ++ A    I    H      YLGLP ++   K   F  
Sbjct: 356 GQQVNFQKSAVCFSKNVHRGDQLMLAQFMGIPCVDHH---SQYLGLPMVLDKKKGASFNH 412

Query: 173 LKDILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*W 352
           LK+ L  +L  W  + LS   +E+LIK VA  IP Y MS FLLP  VC  +   + +F W
Sbjct: 413 LKERLWKKLQTWKGKLLSGAGKEILIKVVAQAIPIYTMSCFLLPKYVCEDLNKLVAQFWW 472

Query: 353 IGKNEGRRGINWLARDKMSSHKREGGM 433
               E ++ I+W+A D++ + K EGG+
Sbjct: 473 NSSTENKK-IHWMAWDRLCAPKEEGGL 498



 Score = 73.6 bits (179), Expect(2) = 6e-31
 Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
 Frame = +1

Query: 418 EGRGYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLG 597
           E  G  FR+LH FN A+L KQGWRLL +  +LV ++ KAKYF    FL+   +   +++ 
Sbjct: 494 EEGGLGFRNLHAFNLALLAKQGWRLLQNPDSLVTKVLKAKYFPTRSFLETTVSPYASVVW 553

Query: 598 KVFC-LLEIY*NGIRWRVGNGRNILVTKDPWIP 693
           K  C    +   G RW+VG+G  I + +D W+P
Sbjct: 554 KSLCDARTVIIQGSRWQVGSGDTIGIWEDRWLP 586


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 89.0 bits (219), Expect(2) = 8e-31
 Identities = 57/144 (39%), Positives = 80/144 (55%)
 Frame = +2

Query: 2    GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKD 181
            GQ +N  K  I FSP     +K   S+IL          YLGLP++ G +K ++F  L D
Sbjct: 999  GQKINKDKSAICFSPKSPAAIKEACSAILDMPVVPCHERYLGLPTVSGKDKKKLFQSLPD 1058

Query: 182  ILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGK 361
             + +R+HGW  + LS+  +EVLIK+VA  IP Y MSVF LP      +   + RF W GK
Sbjct: 1059 RVWNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVARF-WWGK 1117

Query: 362  NEGRRGINWLARDKMSSHKREGGM 433
             EG +GI+W     +   K++GG+
Sbjct: 1118 -EGGKGIHWRRWSDLCFSKKDGGL 1140



 Score = 71.6 bits (174), Expect(2) = 8e-31
 Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +1

Query: 427  GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLGKVF 606
            G  FRDL  FN A+L KQGWRL+    +LV R+ KAKYF    F++       + L + F
Sbjct: 1139 GLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYFPWDDFMEAELGSSPSYLWRSF 1198

Query: 607  CL-LEIY*NGIRWRVGNGRNILVTKDPWIP 693
                E+   G+RWR+G+G+ + V  DPW+P
Sbjct: 1199 LWGRELLRKGVRWRIGDGKEVRVFIDPWVP 1228


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 90.5 bits (223), Expect(2) = 8e-31
 Identities = 46/144 (31%), Positives = 81/144 (56%)
 Frame = +2

Query: 2    GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKD 181
            GQ +N  K  ++FSPN S + K  + + L          YLGLP  +G ++ +IF +LK+
Sbjct: 967  GQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKE 1026

Query: 182  ILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGK 361
             +  R+ GW  + LSR  +E+LIK+VA  IP + M  F L   +C ++   + ++ W  +
Sbjct: 1027 RIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQ 1086

Query: 362  NEGRRGINWLARDKMSSHKREGGM 433
             +  + ++WL+ +K++  K  GG+
Sbjct: 1087 EKDNK-MHWLSWNKLTLPKNMGGL 1109



 Score = 70.1 bits (170), Expect(2) = 8e-31
 Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +1

Query: 427  GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLGK-V 603
            G  FRD++ FN A+L KQGWRL+ D  +L  R+ +AKYF  G   +   T  ++   + +
Sbjct: 1108 GLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSI 1167

Query: 604  FCLLEIY*NGIRWRVGNGRNILVTKDPWIP 693
               L +  NG+ WRVG+G  I +  DPWIP
Sbjct: 1168 QKGLRVLQNGMIWRVGDGSKINIWADPWIP 1197


>gb|EMJ14194.1| hypothetical protein PRUPE_ppa022768mg, partial [Prunus persica]
          Length = 887

 Score = 94.4 bits (233), Expect(2) = 1e-30
 Identities = 51/144 (35%), Positives = 77/144 (53%)
 Frame = +2

Query: 2   GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKD 181
           GQ +N  K  ++FS N+    +  +++ L          YLG+P+L+G  +   F +LK+
Sbjct: 292 GQQLNLMKSSVVFSSNIKRPAQLTLAAALGVQQADYHDRYLGMPTLVGRRRSACFSYLKE 351

Query: 182 ILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGK 361
            +  RLHGW  + LS   +E+L+K+V   IP Y MS FLLP      +   M  F W   
Sbjct: 352 RIMKRLHGWKGKLLSGAGKEILLKAVVQAIPLYSMSYFLLPRGFYDDLNKLMAGFWWNNS 411

Query: 362 NEGRRGINWLARDKMSSHKREGGM 433
           N G R I+W++ +K+   K EGGM
Sbjct: 412 N-GDRKIHWISWEKLCKPKDEGGM 434



 Score = 65.9 bits (159), Expect(2) = 1e-30
 Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
 Frame = +1

Query: 427 GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLGKVF 606
           G  FR L+ FN A+L KQGWR+LT  +++  ++ +AKYF    FL    +   + + K  
Sbjct: 433 GMGFRHLYAFNLAMLAKQGWRILTMPTSMASKLLQAKYFPTSSFLNASVSSHDSAVWKSL 492

Query: 607 CLL-EIY*NGIRWRVGNGRNILVTKDPWIP 693
           C   ++   G RW+V +G NI +  D WIP
Sbjct: 493 CAARKVLEGGTRWQVSDGNNIDIWHDRWIP 522


>ref|XP_004305156.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 813

 Score = 90.9 bits (224), Expect(2) = 1e-30
 Identities = 52/144 (36%), Positives = 79/144 (54%)
 Frame = +2

Query: 2   GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKD 181
           GQ +NF K +I+FS      L++ I+  L     +    YLGLP+ +G +K + F F+K+
Sbjct: 212 GQLVNFGKSNIVFSKGTPVSLQSSIAGELGVGVVVKHEKYLGLPTYVGKSKTETFAFIKE 271

Query: 182 ILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGK 361
            L  +L GW  + LS   + +LI+ VA  +P Y MS FLLP +    +     RF W+G 
Sbjct: 272 RLSKKLEGWQGKLLSGAGKGILIRVVAQALPSYSMSCFLLPKSFYAALHQKCARF-WLGS 330

Query: 362 NEGRRGINWLARDKMSSHKREGGM 433
            +  R I+WL+ +K+   K  GGM
Sbjct: 331 KQEDRKIHWLSWEKLCRPKERGGM 354



 Score = 69.3 bits (168), Expect(2) = 1e-30
 Identities = 35/92 (38%), Positives = 51/92 (55%)
 Frame = +1

Query: 418 EGRGYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLG 597
           E  G  FRDL+  N A+L KQGWR+L    +LV R+F+A+YF    F     T   A   
Sbjct: 350 ERGGMGFRDLYAHNIAMLAKQGWRILQFPDSLVARLFRARYFPSSSFWSATATDGSACWK 409

Query: 598 KVFCLLEIY*NGIRWRVGNGRNILVTKDPWIP 693
            +     +   G+RW+VG+G  + + +DPW+P
Sbjct: 410 GIAEARSVLARGMRWQVGDGTRVCIWEDPWLP 441


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 90.9 bits (224), Expect(2) = 1e-30
 Identities = 46/144 (31%), Positives = 81/144 (56%)
 Frame = +2

Query: 2    GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKD 181
            GQ +N  K  ++FSPN S + K  + + L          YLGLP  +G ++ +IF +LK+
Sbjct: 940  GQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKE 999

Query: 182  ILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGK 361
             +  R+ GW  + LSR  +E+LIK+VA  IP + M  F L   +C ++   + ++ W  +
Sbjct: 1000 RIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQ 1059

Query: 362  NEGRRGINWLARDKMSSHKREGGM 433
             +  + ++WL+ +K++  K  GG+
Sbjct: 1060 EKDNK-MHWLSWNKLTLPKNMGGL 1082



 Score = 68.9 bits (167), Expect(2) = 1e-30
 Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +1

Query: 427  GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLGK-V 603
            G  FRD++ FN A+L KQGWRL+ D  +L  R+ +AKYF  G   +   T  ++   + +
Sbjct: 1081 GLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRSI 1140

Query: 604  FCLLEIY*NGIRWRVGNGRNILVTKDPWIP 693
               L +  NG+ WR+G+G  I +  DPWIP
Sbjct: 1141 QKGLRVLQNGMIWRMGDGSKINIWADPWIP 1170


>gb|EPS73861.1| hypothetical protein M569_00896, partial [Genlisea aurea]
          Length = 1651

 Score = 85.5 bits (210), Expect(2) = 2e-30
 Identities = 43/108 (39%), Positives = 67/108 (62%)
 Frame = +2

Query: 113  GNYLGLPSLIGHNKCQIFGFLKDILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSV 292
            G YLGLPS IG ++  IF  +++ + +++  W +R LS+  R VLIK+V  VIP Y MS 
Sbjct: 1060 GRYLGLPSAIGKSRRAIFQSIQEKVEAKIMHWSSRMLSQAGRSVLIKAVLQVIPVYTMSC 1119

Query: 293  FLLPNTVCRKMQITMNRF*WIGKNEGRRGINWLARDKMSSHKREGGMS 436
            FLLP +   K+   + RF W G   G + ++WL R++++ +   GG+S
Sbjct: 1120 FLLPKSFLHKLMAAITRFWWSG--SGSKKMHWLPREELTVNLAAGGLS 1165



 Score = 73.6 bits (179), Expect(2) = 2e-30
 Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
 Frame = +1

Query: 427  GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLGK-- 600
            G  FRDL  FN A++ KQ WRLL+  +++  R+ KAKY+    FL       +A LG+  
Sbjct: 1163 GLSFRDLLLFNRAMVAKQSWRLLSHPNSICSRLIKAKYYPHSSFL-------MAPLGRSP 1215

Query: 601  ------VFCLLEIY*NGIRWRVGNGRNILVTKDPWIPST 699
                  +    E+   G+RWR+GNG ++   KDPWIP+T
Sbjct: 1216 SYVWRGIHSSREVLLGGLRWRIGNGLSVDAWKDPWIPNT 1254


>gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indica Group]
          Length = 697

 Score = 90.1 bits (222), Expect(2) = 2e-30
 Identities = 50/145 (34%), Positives = 81/145 (55%)
 Frame = +2

Query: 2   GQSMNFQKLDILFSPNLSGILKADISSILRNFHPLGGGNYLGLPSLIGHNKCQIFGFLKD 181
           GQ +N  K  ++FS N+    K   S  L          YLGLP  IG +K + F +LK+
Sbjct: 232 GQIVNRDKSVVMFSSNMDEEEKKVFSHTLGINCIAHNDRYLGLPVFIGRSKAKTFEYLKE 291

Query: 182 ILRSRLHGWGTRWLSRTSREVLIKSVA*VIPFYFMSVFLLPNTVCRKMQITMNRF*WIGK 361
            +   + GW  ++LS+  +E+LIK+VA  IP Y MS F L  ++C ++   + RF W  +
Sbjct: 292 KIWRCIQGWKEKFLSKAGKEILIKAVAQAIPTYAMSCFYLTKSLCDELTSMILRF-WWAQ 350

Query: 362 NEGRRGINWLARDKMSSHKREGGMS 436
           ++  + I+WL +DK+   K +GG++
Sbjct: 351 HDNDKKIHWLGKDKIMKPKSQGGLA 375



 Score = 68.9 bits (167), Expect(2) = 2e-30
 Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
 Frame = +1

Query: 427 GYEFRDLHCFNTAILRKQGWRLLTDTSTLVYRIFKAKYFSRGIFLQLF*TVIIALLGK-V 603
           G  FRDLH FN A+L +QGWRL+ +  +L  R+ KAKYF     L       ++   + +
Sbjct: 373 GLAFRDLHSFNIAMLARQGWRLIQNPDSLCSRLLKAKYFPNCNVLDAQSRKQMSYSWRSI 432

Query: 604 FCLLEIY*NGIRWRVGNGRNILVTKDPWIP 693
              +++   G+ WRVGNG +I +  DPW+P
Sbjct: 433 LKGIQLLRKGVIWRVGNGEHINIWSDPWLP 462