BLASTX nr result

ID: Jatropha_contig00019880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00019880
         (444 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago ...    75   1e-14
ref|XP_003605618.1| Photosystem II reaction center protein M [Me...    55   2e-12
ref|XP_003606040.1| hypothetical protein MTR_4g051190 [Medicago ...    74   1e-11
ref|XP_003605642.1| hypothetical protein MTR_4g035260 [Medicago ...    74   1e-11
ref|NP_683579.1| uncharacterized protein [Arabidopsis thaliana] ...    65   1e-08
ref|XP_002888366.1| hypothetical protein ARALYDRAFT_894017 [Arab...    64   1e-08
ref|XP_002886862.1| hypothetical protein ARALYDRAFT_893969 [Arab...    64   1e-08
ref|XP_003600044.1| hypothetical protein MTR_3g051100 [Medicago ...    57   2e-06
emb|CAA25830.1| hypothetical protein [Pisum sativum]                   55   9e-06
pir||T06501 hypothetical protein 59 - garden pea chloroplast           55   9e-06

>ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago truncatula]
           gi|355518112|gb|AES99735.1| hypothetical protein
           MTR_5g084150 [Medicago truncatula]
          Length = 187

 Score = 75.5 bits (184), Expect(2) = 1e-14
 Identities = 40/77 (51%), Positives = 42/77 (54%)
 Frame = -3

Query: 385 FWPELDLNQRRHMPNEFTVRPH*PLGHRPRKNQIQTY**SMINFLS*YPTPRGSRIPAAS 206
           FW ELDLNQRRH+ NEFT                             YPTPRGSRIP AS
Sbjct: 21  FWAELDLNQRRHIANEFT-----------------------------YPTPRGSRIPVAS 51

Query: 205 LKERCPEPLDDGGTFAR 155
           LKERCP+PLDDG  F R
Sbjct: 52  LKERCPKPLDDGDEFLR 68



 Score = 29.6 bits (65), Expect(2) = 1e-14
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -1

Query: 435 YFRENKGVISFHGGSVNF 382
           +F+  K VIS HGGSVNF
Sbjct: 4   HFKNTKWVISLHGGSVNF 21


>ref|XP_003605618.1| Photosystem II reaction center protein M [Medicago truncatula]
           gi|355506673|gb|AES87815.1| Photosystem II reaction
           center protein M [Medicago truncatula]
          Length = 164

 Score = 55.1 bits (131), Expect(2) = 2e-12
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +3

Query: 150 GGRANVPPSSSGSGHLSFKEAAGIRLPLG 236
           GGRA++PPSSSG GHLSFKEA GIRLPLG
Sbjct: 42  GGRASMPPSSSGLGHLSFKEATGIRLPLG 70



 Score = 42.4 bits (98), Expect(2) = 2e-12
 Identities = 21/29 (72%), Positives = 22/29 (75%)
 Frame = +2

Query: 314 RLMGTDCKFVWHMSTLVQIQLGPKFTDPP 400
           RLMGTDCKFV +MSTLVQIQL      PP
Sbjct: 71  RLMGTDCKFVGNMSTLVQIQLVQLVRAPP 99


>ref|XP_003606040.1| hypothetical protein MTR_4g051190 [Medicago truncatula]
           gi|355507095|gb|AES88237.1| hypothetical protein
           MTR_4g051190 [Medicago truncatula]
          Length = 96

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 43/102 (42%), Positives = 48/102 (47%)
 Frame = -3

Query: 436 VFSREQGGYIISWRISEFWPELDLNQRRHMPNEFTVRPH*PLGHRPRKNQIQTY**SMIN 257
           +F   Q GYII+W IS+F                        G  P              
Sbjct: 33  IFREHQMGYIIAWWISKFLGRA--------------------GFEP-------------- 58

Query: 256 FLS*YPTPRGSRIPAASLKERCPEPLDDGGTFARPPAYYAHS 131
               YPTPRGSRIP ASLKERCP+PLDDGG  ARPP YY H+
Sbjct: 59  ----YPTPRGSRIPVASLKERCPKPLDDGGILARPPFYYVHT 96


>ref|XP_003605642.1| hypothetical protein MTR_4g035260 [Medicago truncatula]
           gi|355506697|gb|AES87839.1| hypothetical protein
           MTR_4g035260 [Medicago truncatula]
          Length = 142

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 43/102 (42%), Positives = 48/102 (47%)
 Frame = -3

Query: 436 VFSREQGGYIISWRISEFWPELDLNQRRHMPNEFTVRPH*PLGHRPRKNQIQTY**SMIN 257
           +F   Q GYII+W IS+F                        G  P              
Sbjct: 79  IFREHQMGYIIAWWISKFLGRA--------------------GFEP-------------- 104

Query: 256 FLS*YPTPRGSRIPAASLKERCPEPLDDGGTFARPPAYYAHS 131
               YPTPRGSRIP ASLKERCP+PLDDGG  ARPP YY H+
Sbjct: 105 ----YPTPRGSRIPVASLKERCPKPLDDGGILARPPFYYVHT 142


>ref|NP_683579.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332642848|gb|AEE76369.1| uncharacterized protein
           AT3G20362 [Arabidopsis thaliana]
          Length = 47

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 31/44 (70%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
 Frame = +1

Query: 109 TISKNSSYYEH-SMLAVGQMCPHRLVVQDISLSRRQRGFDFPWG 237
           +I +N S  E   M+AV Q+CPHRLVVQDISLSRRQ+GFDFPWG
Sbjct: 4   SIKENQSLLEKIPMMAVEQVCPHRLVVQDISLSRRQQGFDFPWG 47


>ref|XP_002888366.1| hypothetical protein ARALYDRAFT_894017 [Arabidopsis lyrata subsp.
           lyrata] gi|297334207|gb|EFH64625.1| hypothetical protein
           ARALYDRAFT_894017 [Arabidopsis lyrata subsp. lyrata]
          Length = 57

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +1

Query: 145 MLAVGQMCPHRLVVQDISLSRRQRGFDFPWG 237
           M+AV Q+CPHRLVVQDISLSRRQRGFDFPWG
Sbjct: 27  MMAVEQVCPHRLVVQDISLSRRQRGFDFPWG 57


>ref|XP_002886862.1| hypothetical protein ARALYDRAFT_893969 [Arabidopsis lyrata subsp.
           lyrata] gi|297332703|gb|EFH63121.1| hypothetical protein
           ARALYDRAFT_893969 [Arabidopsis lyrata subsp. lyrata]
          Length = 63

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +1

Query: 145 MLAVGQMCPHRLVVQDISLSRRQRGFDFPWG 237
           M+AV Q+CPHRLVVQDISLSRRQRGFDFPWG
Sbjct: 33  MMAVEQVCPHRLVVQDISLSRRQRGFDFPWG 63


>ref|XP_003600044.1| hypothetical protein MTR_3g051100 [Medicago truncatula]
           gi|355489092|gb|AES70295.1| hypothetical protein
           MTR_3g051100 [Medicago truncatula]
          Length = 280

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/56 (60%), Positives = 36/56 (64%)
 Frame = +3

Query: 69  KDSSNLVIPFRDIDNFKKLLIL*A*YAGGRANVPPSSSGSGHLSFKEAAGIRLPLG 236
           KD S+ +I F  IDNFKKL IL       R     SSSG GHLSFKEA GIRLPLG
Sbjct: 6   KDPSDRIISFHYIDNFKKLFILCMNIVEWRLG---SSSGLGHLSFKEATGIRLPLG 58


>emb|CAA25830.1| hypothetical protein [Pisum sativum]
          Length = 62

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
 Frame = -3

Query: 436 VFSREQGGYIISWRISE-FWPELDLNQRRHMPNEFTVRPH 320
           +    Q G IISW I + FW ELDLNQRRH+ NEFTVRPH
Sbjct: 23  ILREHQMGSIISWWIQKYFWAELDLNQRRHIANEFTVRPH 62


>pir||T06501 hypothetical protein 59 - garden pea chloroplast
          Length = 62

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
 Frame = -3

Query: 436 VFSREQGGYIISWRISE-FWPELDLNQRRHMPNEFTVRPH 320
           +    Q G IISW I + FW ELDLNQRRH+ NEFTVRPH
Sbjct: 23  ILREHQMGSIISWWIQKYFWAELDLNQRRHIANEFTVRPH 62


Top