BLASTX nr result
ID: Jatropha_contig00019748
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00019748
(469 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ... 106 3e-21
gb|AGC78945.1| hypothetical protein (mitochondrion) [Vicia faba] 94 2e-17
ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat... 94 2e-17
gb|AAP80631.1|AF475109_1 ubiquitin/ribosomal fusion protein [Tri... 64 1e-08
gb|ESW08482.1| hypothetical protein PHAVU_009G049400g [Phaseolus... 64 2e-08
gb|ERN13028.1| hypothetical protein AMTR_s00040p00104050 [Ambore... 64 2e-08
gb|EPS71799.1| hypothetical protein M569_02961, partial [Genlise... 64 2e-08
gb|EOY23660.1| Ubiquitin supergroup,Ribosomal protein L40e [Theo... 64 2e-08
ref|XP_006292019.1| hypothetical protein CARUB_v10018208mg [Caps... 64 2e-08
ref|XP_004156525.1| PREDICTED: ubiquitin-60S ribosomal protein L... 64 2e-08
ref|XP_004137301.1| PREDICTED: ubiquitin-60S ribosomal protein L... 64 2e-08
pdb|3IZR|PP Chain p, Localization Of The Large Subunit Ribosomal... 64 2e-08
gb|AAM19122.1|AC103891_2 Putative ubiquitin / ribosomal protein ... 64 2e-08
ref|XP_002530306.1| ubiquitin, putative [Ricinus communis] gi|25... 64 2e-08
tpe|CAI56329.1| TPA: ubiquitin-60S ribosomal L40 fusion protein ... 64 2e-08
ref|NP_001049479.1| Os03g0234200 [Oryza sativa Japonica Group] g... 64 2e-08
ref|NP_565836.1| 60S ribosomal protein L40-1 [Arabidopsis thalia... 64 2e-08
gb|AFK47149.1| unknown [Lotus japonicus] 64 2e-08
ref|XP_002282071.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60... 64 2e-08
ref|XP_003558419.1| PREDICTED: ubiquitin-60S ribosomal protein L... 64 2e-08
>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
gi|355477385|gb|AES58588.1| Ribosomal protein S10
[Medicago truncatula]
Length = 1152
Score = 106 bits (264), Expect = 3e-21
Identities = 51/58 (87%), Positives = 52/58 (89%)
Frame = +2
Query: 38 YAWFTRFYHCRAQSYSKEEFDPGSEGTLAICLTHASRTLFSGSWAEGKRGS*LKVARL 211
YA FTRFYHCRAQSYSKEEFDPGSEGTLAICLTHASRTLFSGSWAEGK +KVA L
Sbjct: 65 YARFTRFYHCRAQSYSKEEFDPGSEGTLAICLTHASRTLFSGSWAEGKEAPSVKVACL 122
>gb|AGC78945.1| hypothetical protein (mitochondrion) [Vicia faba]
Length = 187
Score = 94.0 bits (232), Expect = 2e-17
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = -2
Query: 210 RRATFS*EPLFPSAQLPENNVRLACVKHIASVPSEPGSNSSFEYDWALQW 61
R+ATF+ FPSAQLPENNVRLACVKHIASVPSEPGSNSSFEYDWALQW
Sbjct: 138 RQATFTLGASFPSAQLPENNVRLACVKHIASVPSEPGSNSSFEYDWALQW 187
>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
[Medicago truncatula]
Length = 1116
Score = 94.0 bits (232), Expect = 2e-17
Identities = 44/50 (88%), Positives = 46/50 (92%)
Frame = -2
Query: 210 RRATFS*EPLFPSAQLPENNVRLACVKHIASVPSEPGSNSSFEYDWALQW 61
R+ATF+ FPSAQLPENNVRLACVKHIASVPSEPGSNSSFEYDWALQW
Sbjct: 1067 RQATFTLGASFPSAQLPENNVRLACVKHIASVPSEPGSNSSFEYDWALQW 1116
>gb|AAP80631.1|AF475109_1 ubiquitin/ribosomal fusion protein [Triticum aestivum]
Length = 128
Score = 64.3 bits (155), Expect = 1e-08
Identities = 37/82 (45%), Positives = 47/82 (57%)
Frame = +2
Query: 41 AWFTRFYHCRAQSYSKEEFDPGSEGTLAICLTHASRTLFSGSWAEGKRGS*LKVARLHPR 220
+W R + CR Q S G++ + + + L + + + K ARLHPR
Sbjct: 47 SWXXRPHPCRLQHPEGSPPSISSSGSVGGIIEPSLQAL-ARKYNQEKMICRKCYARLHPR 105
Query: 221 AVNCRKKKCGHSNQLRPKKKIK 286
AVNCRKKKCGHSNQLRPKKKIK
Sbjct: 106 AVNCRKKKCGHSNQLRPKKKIK 127
>gb|ESW08482.1| hypothetical protein PHAVU_009G049400g [Phaseolus vulgaris]
Length = 128
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 101 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 128
>gb|ERN13028.1| hypothetical protein AMTR_s00040p00104050 [Amborella trichopoda]
Length = 127
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 100 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 127
>gb|EPS71799.1| hypothetical protein M569_02961, partial [Genlisea aurea]
Length = 129
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 102 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 129
>gb|EOY23660.1| Ubiquitin supergroup,Ribosomal protein L40e [Theobroma cacao]
Length = 151
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 124 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 151
>ref|XP_006292019.1| hypothetical protein CARUB_v10018208mg [Capsella rubella]
gi|482560726|gb|EOA24917.1| hypothetical protein
CARUB_v10018208mg [Capsella rubella]
Length = 142
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 115 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 142
>ref|XP_004156525.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Cucumis
sativus]
Length = 208
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 181 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 208
>ref|XP_004137301.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Cucumis
sativus]
Length = 93
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 66 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 93
>pdb|3IZR|PP Chain p, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
Length = 53
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 25 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 52
>gb|AAM19122.1|AC103891_2 Putative ubiquitin / ribosomal protein CEP52 [Oryza sativa Japonica
Group] gi|125543022|gb|EAY89161.1| hypothetical protein
OsI_10655 [Oryza sativa Indica Group]
gi|125585519|gb|EAZ26183.1| hypothetical protein
OsJ_10050 [Oryza sativa Japonica Group]
Length = 171
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 143 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 170
>ref|XP_002530306.1| ubiquitin, putative [Ricinus communis]
gi|255578975|ref|XP_002530340.1| ubiquitin, putative
[Ricinus communis] gi|356509194|ref|XP_003523336.1|
PREDICTED: ubiquitin-60S ribosomal protein L40-like
[Glycine max] gi|356516113|ref|XP_003526741.1|
PREDICTED: ubiquitin-60S ribosomal protein L40-like
[Glycine max] gi|356572584|ref|XP_003554448.1|
PREDICTED: ubiquitin-60S ribosomal protein L40-like
[Glycine max] gi|449438865|ref|XP_004137208.1|
PREDICTED: ubiquitin-60S ribosomal protein L40-like
[Cucumis sativus] gi|449456437|ref|XP_004145956.1|
PREDICTED: ubiquitin-60S ribosomal protein L40-like
[Cucumis sativus] gi|449497417|ref|XP_004160396.1|
PREDICTED: ubiquitin-60S ribosomal protein L40-like
[Cucumis sativus] gi|565475186|ref|XP_006295234.1|
hypothetical protein CARUB_v10024320mg [Capsella
rubella] gi|71040673|gb|AAZ20285.1| ubiquitin fusion
protein [Arachis hypogaea] gi|147769165|emb|CAN60770.1|
hypothetical protein VITISV_012429 [Vitis vinifera]
gi|148908659|gb|ABR17437.1| unknown [Picea sitchensis]
gi|223530144|gb|EEF32056.1| ubiquitin, putative [Ricinus
communis] gi|223530162|gb|EEF32073.1| ubiquitin,
putative [Ricinus communis] gi|284433784|gb|ADB85098.1|
ubiquitin C variant [Jatropha curcas]
gi|297740140|emb|CBI30322.3| unnamed protein product
[Vitis vinifera] gi|330318561|gb|AEC10952.1| ubiquitin
fusion protein [Camellia sinensis]
gi|388516721|gb|AFK46422.1| unknown [Lotus japonicus]
gi|482563942|gb|EOA28132.1| hypothetical protein
CARUB_v10024320mg [Capsella rubella]
gi|508716416|gb|EOY08313.1| Ubiquitin extension protein
1 isoform 1 [Theobroma cacao]
gi|557104907|gb|ESQ45241.1| hypothetical protein
EUTSA_v10010818mg [Eutrema salsugineum]
gi|557111958|gb|ESQ52242.1| hypothetical protein
EUTSA_v10017417mg [Eutrema salsugineum]
gi|557532215|gb|ESR43398.1| hypothetical protein
CICLE_v10013083mg [Citrus clementina]
gi|557543468|gb|ESR54446.1| hypothetical protein
CICLE_v10022855mg [Citrus clementina]
gi|561036386|gb|ESW34916.1| hypothetical protein
PHAVU_001G191700g [Phaseolus vulgaris]
Length = 128
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 101 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 128
>tpe|CAI56329.1| TPA: ubiquitin-60S ribosomal L40 fusion protein [Vitis vinifera]
Length = 128
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 101 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 128
>ref|NP_001049479.1| Os03g0234200 [Oryza sativa Japonica Group]
gi|302425019|sp|P0CH35.1|RL40B_ORYSJ RecName:
Full=Ubiquitin-60S ribosomal protein L40-2; Contains:
RecName: Full=Ubiquitin; Contains: RecName: Full=60S
ribosomal protein L40-2; AltName: Full=CEP52; Flags:
Precursor gi|302595812|sp|P0CH34.1|RL40A_ORYSJ RecName:
Full=Ubiquitin-60S ribosomal protein L40-1; Contains:
RecName: Full=Ubiquitin; Contains: RecName: Full=60S
ribosomal protein L40-1; AltName: Full=CEP52; Flags:
Precursor gi|303857|dbj|BAA02154.1| ubiquitin/ribosomal
polyprotein [Oryza sativa Japonica Group]
gi|13358806|dbj|BAB33149.1| ubiquitin fused to ribosomal
protein L40 [Oryza sativa] gi|13358808|dbj|BAB33150.1|
ubiquitin fused to ribosomal protein L40 [Oryza sativa]
gi|52077170|dbj|BAD46215.1| ubiquitin / ribosomal
protein CEP52 [Oryza sativa Japonica Group]
gi|108707030|gb|ABF94825.1| ubiquitin fusion protein,
putative, expressed [Oryza sativa Japonica Group]
gi|113547950|dbj|BAF11393.1| Os03g0234200 [Oryza sativa
Japonica Group] gi|125606687|gb|EAZ45723.1| hypothetical
protein OsJ_30399 [Oryza sativa Japonica Group]
gi|218202661|gb|EEC85088.1| hypothetical protein
OsI_32449 [Oryza sativa Indica Group]
Length = 129
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 101 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 128
>ref|NP_565836.1| 60S ribosomal protein L40-1 [Arabidopsis thaliana]
gi|18409639|ref|NP_566969.1| ubiquitin extension protein
1 [Arabidopsis thaliana]
gi|302425250|sp|Q42202.2|RL40B_ARATH RecName:
Full=Ubiquitin-60S ribosomal protein L40-2; AltName:
Full=Protein EARLY-RESPONSIVE TO DEHYDRATION 16;
AltName: Full=Protein EMBRYO DEFECTIVE 2167; AltName:
Full=Protein HAPLESS 4; Contains: RecName:
Full=Ubiquitin; Contains: RecName: Full=60S ribosomal
protein L40-2; AltName: Full=CEP52; Flags: Precursor
gi|302595860|sp|B9DHA6.1|RL40A_ARATH RecName:
Full=Ubiquitin-60S ribosomal protein L40-1; Contains:
RecName: Full=Ubiquitin; Contains: RecName: Full=60S
ribosomal protein L40-1; AltName: Full=CEP52; Flags:
Precursor gi|13430798|gb|AAK26021.1|AF360311_1 putative
ubiquitin extension protein UBQ2 [Arabidopsis thaliana]
gi|166930|gb|AAA32904.1| ubiquitin extension protein
(UBQ1) [Arabidopsis thaliana] gi|166932|gb|AAA32905.1|
ubiquitin extension protein (UBQ2) [Arabidopsis
thaliana] gi|4886268|emb|CAB43405.1| ubiquitin /
ribosomal protein CEP52 [Arabidopsis thaliana]
gi|14334950|gb|AAK59652.1| putative ubiquitin extension
protein UBQ1 [Arabidopsis thaliana]
gi|15810643|gb|AAL07246.1| putative ubiquitin extension
protein UBQ2 [Arabidopsis thaliana]
gi|16323384|gb|AAL15186.1| putative ubiquitin extension
protein UBQ1 [Arabidopsis thaliana]
gi|20198116|gb|AAM15407.1| ubiquitin extension protein
(UBQ2) [Arabidopsis thaliana] gi|21553955|gb|AAM63036.1|
ubiquitin extension protein UBQ1 [Arabidopsis thaliana]
gi|222424333|dbj|BAH20123.1| AT2G36170 [Arabidopsis
thaliana] gi|330254118|gb|AEC09212.1| 60S ribosomal
protein L40-1 [Arabidopsis thaliana]
gi|332645445|gb|AEE78966.1| ubiquitin extension protein
1 [Arabidopsis thaliana]
Length = 128
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 101 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 128
>gb|AFK47149.1| unknown [Lotus japonicus]
Length = 128
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 101 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 128
>ref|XP_002282071.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein L40
[Vitis vinifera]
Length = 228
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 201 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 228
>ref|XP_003558419.1| PREDICTED: ubiquitin-60S ribosomal protein L40-2-like [Brachypodium
distachyon] gi|357160177|ref|XP_003578682.1| PREDICTED:
ubiquitin-60S ribosomal protein L40-2-like [Brachypodium
distachyon] gi|473890022|gb|EMS48574.1| Ubiquitin-60S
ribosomal protein L40-2 [Triticum urartu]
Length = 129
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 203 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 286
ARLHPRAVNCRKKKCGHSNQLRPKKKIK
Sbjct: 101 ARLHPRAVNCRKKKCGHSNQLRPKKKIK 128