BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00019746
         (786 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]   283   5e-74
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]   229   8e-58
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]   213   7e-53
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]   204   3e-50
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       197   2e-48
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   196   6e-48
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     196   9e-48
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja...   193   6e-47
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc...   193   6e-47
ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776...   192   8e-47
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   191   2e-46
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   190   4e-46
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     190   4e-46
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   190   5e-46
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     190   5e-46
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   189   1e-45
gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subc...   188   2e-45
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...   188   2e-45
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]     188   2e-45
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   187   3e-45

>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
          Length = 633

 Score =  283 bits (724), Expect = 5e-74
 Identities = 134/147 (91%), Positives = 140/147 (95%)
 Frame = -1

Query: 441 RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
           R LLSIAA++DYEIWQMDVKTAFLNGSLDECIYMKQ EGFI NG E+LLCKLNRSIYGLK
Sbjct: 204 RILLSIAAYFDYEIWQMDVKTAFLNGSLDECIYMKQXEGFIXNGQEHLLCKLNRSIYGLK 263

Query: 261 QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
           QASRSWNTCFDQ IK+FGFDQCHDESCVYKKWNG KVVFLVLYVDDILLIGNC+GML SV
Sbjct: 264 QASRSWNTCFDQTIKTFGFDQCHDESCVYKKWNGKKVVFLVLYVDDILLIGNCIGMLTSV 323

Query: 81  KDWLSQRFDMKDLGEAAHILGIKLMRD 1
           KDWLSQRFDMKDLGEAAHILGIKLMR+
Sbjct: 324 KDWLSQRFDMKDLGEAAHILGIKLMRN 350



 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 38/87 (43%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
 Frame = -1

Query: 672 NIQGHNVGASNISLPPGDDRHVEVPKHD---------QDVVPPVMDLPALQPQQDEGVIA 520
           N+ G      +ISLP GD+ +VE P H          QDVVPPV++L ALQPQQ+EGV  
Sbjct: 15  NVSGPEFETXDISLPVGDEENVEAPIHVXFXEHIDEVQDVVPPVINLXALQPQQBEGVAX 74

Query: 519 EXXXXXXXXXXXXXXXRYTLLGEAFGR 439
           +               RYT LGEAF R
Sbjct: 75  QPVVLRRSGRTRRPPVRYTXLGEAFDR 101


>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score =  229 bits (584), Expect = 8e-58
 Identities = 130/267 (48%), Positives = 150/267 (56%), Gaps = 58/267 (21%)
 Frame = -1

Query: 768  NQHQREYSVPNISLP-PESSGSYGETEVAAVDPNIQGHNVGASNISLPPGDDRHVEVPKH 592
            ++H+ E  +    +P P+ SG            N+ G     S+ISLP GD+ +VE P H
Sbjct: 1030 SEHEPEPFMVGADIPLPQRSGR-----------NVSGPKFETSDISLPVGDEENVEAPVH 1078

Query: 591  D---------QDVVPPVMDLPALQPQQDEGVIAEXXXXXXXXXXXXXXXRYTLLGEAFGR 439
                      QDVVPPV++LPALQPQQDEGV  +               +YTLLGEAF R
Sbjct: 1079 VPFEEYIDEVQDVVPPVINLPALQPQQDEGVAEQPVVLRRSGRTRRPPVQYTLLGEAFDR 1138

Query: 438  T------------------------------------------------LLSIAAHYDYE 403
                                                             +  I +++DYE
Sbjct: 1139 IPEEVNTEPVCYDDALQDKDADKWLVAMKSEMESMYSNQVWELVEPPKGVKPIGSYFDYE 1198

Query: 402  IWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLKQASRSWNTCFDQA 223
            IWQMDVK AFLNGSLDECIYMKQPEGFI NG E+LLCKLNRSIYGLKQ SRSWNTCFDQ 
Sbjct: 1199 IWQMDVKIAFLNGSLDECIYMKQPEGFITNGQEHLLCKLNRSIYGLKQTSRSWNTCFDQT 1258

Query: 222  IKSFGFDQCHDESCVYKKWNGSKVVFL 142
            IK+FGFDQCHDESCVYKKWNG KVVFL
Sbjct: 1259 IKTFGFDQCHDESCVYKKWNGKKVVFL 1285


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score =  213 bits (541), Expect = 7e-53
 Identities = 108/147 (73%), Positives = 113/147 (76%)
 Frame = -1

Query: 441  RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
            R LLSIAA++DYEIWQMDVKTAFLNGSLDECIYMKQ EGFI NG E+LLCKLNRSIYGLK
Sbjct: 882  RILLSIAAYFDYEIWQMDVKTAFLNGSLDECIYMKQLEGFITNGQEHLLCKLNRSIYGLK 941

Query: 261  QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
            QASRSWNTCFDQ IK+FGFDQCHD SCVYKKWNG KVVFL                    
Sbjct: 942  QASRSWNTCFDQTIKTFGFDQCHDVSCVYKKWNGKKVVFL-------------------- 981

Query: 81   KDWLSQRFDMKDLGEAAHILGIKLMRD 1
                  RFDMK LGEAAHILGIKLMR+
Sbjct: 982  ------RFDMKYLGEAAHILGIKLMRN 1002



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 49/141 (34%), Positives = 68/141 (48%), Gaps = 15/141 (10%)
 Frame = -1

Query: 768  NQHQREYSVPNISLP-PESSGSYGETEVAAVDPNIQGHNVGASNISLPPGDDRHVEVPKH 592
            ++H+ E  +    +P P+ SG            N+ G      +ISLP GD+ +VE P H
Sbjct: 693  SEHEPEPFMVRADIPLPQRSGR-----------NVSGPEFETFDISLPVGDEENVEAPIH 741

Query: 591  D---------QDVVPPVMDLPALQPQQDEGVIAEXXXXXXXXXXXXXXXRYTLLGEAFGR 439
                      QDVVPPV++LPALQPQQDEGV  +               RYTLLGEAF R
Sbjct: 742  VPFEEHIDEVQDVVPPVINLPALQPQQDEGVAEQPVVLRRSGRTRRPPVRYTLLGEAFDR 801

Query: 438  -----TLLSIAAHYDYEIWQM 391
                     + + Y  ++W++
Sbjct: 802  IPEEVNTEPMESMYSNQVWEL 822


>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
          Length = 668

 Score =  204 bits (518), Expect = 3e-50
 Identities = 101/147 (68%), Positives = 118/147 (80%)
 Frame = -1

Query: 441 RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
           R LLSI A+YDYEIWQMDVKT FLNG L+E IYM QPEGF+    E  +CKL RSIYGLK
Sbjct: 239 RILLSIXAYYDYEIWQMDVKTXFLNGHLEETIYMVQPEGFVVKDQEQKVCKLQRSIYGLK 298

Query: 261 QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
           QASRSWN  F++AIKS+GF+Q   E CVYK+  G KVVFLVLYVDDILLIGN V  L+ V
Sbjct: 299 QASRSWNIIFNEAIKSYGFEQNLGEPCVYKQIGGDKVVFLVLYVDDILLIGNDVESLSKV 358

Query: 81  KDWLSQRFDMKDLGEAAHILGIKLMRD 1
           K+WL+ +F MKDLGEA++ILGI++ RD
Sbjct: 359 KNWLASQFQMKDLGEASYILGIQMTRD 385


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  197 bits (502), Expect = 2e-48
 Identities = 100/147 (68%), Positives = 115/147 (78%)
 Frame = -1

Query: 441  RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
            R LLSIA  Y+YEIWQMDVKTAFLNG+L+E IYM QPEGFI    E  +CKL +SIYGLK
Sbjct: 899  RILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYGLK 958

Query: 261  QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
            QASRSWN  FD AIKS+GF+Q  DE CVYKK   S V FL+LYVDDILLIGN V  L  V
Sbjct: 959  QASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLTDV 1018

Query: 81   KDWLSQRFDMKDLGEAAHILGIKLMRD 1
            K WL+ +F MKDLGEA +ILGI+++R+
Sbjct: 1019 KKWLNTQFQMKDLGEAQYILGIQIVRN 1045


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  196 bits (499), Expect = 6e-48
 Identities = 97/147 (65%), Positives = 115/147 (78%)
 Frame = -1

Query: 441 RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
           R LL+ AAHYDYEIWQMDVKTAFLNG+L+E +YM QPEGF        +CKL+RSIYGLK
Sbjct: 536 RILLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAARKVCKLHRSIYGLK 595

Query: 261 QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
           QASRSWN  F++AIK F F +  +E CVYKK +GS V FLVLYVDDILL+GN + +L SV
Sbjct: 596 QASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDILLLGNDIPLLQSV 655

Query: 81  KDWLSQRFDMKDLGEAAHILGIKLMRD 1
           K WL   F MKD+GEAA+ILGI++ RD
Sbjct: 656 KTWLGSCFSMKDMGEAAYILGIRIYRD 682


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  196 bits (497), Expect = 9e-48
 Identities = 95/147 (64%), Positives = 117/147 (79%)
 Frame = -1

Query: 441  RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
            R +L+IAA++DYEIWQMDVKTAFLNG+L E +YM QP+GF++      +CKL +SIYGLK
Sbjct: 889  RIILAIAAYFDYEIWQMDVKTAFLNGNLSEDVYMIQPQGFVDPESPGKICKLQKSIYGLK 948

Query: 261  QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
            QASRSWN  FD+ IK FGF +  +E+CVYKK +GS +VFL+LYVDDILLIGN + ML SV
Sbjct: 949  QASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVFLILYVDDILLIGNDIPMLESV 1008

Query: 81   KDWLSQRFDMKDLGEAAHILGIKLMRD 1
            K  L   F MKDLGEAA+ILGI++ RD
Sbjct: 1009 KSSLKNSFSMKDLGEAAYILGIRIYRD 1035


>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 700

 Score =  193 bits (490), Expect = 6e-47
 Identities = 94/147 (63%), Positives = 117/147 (79%)
 Frame = -1

Query: 441 RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
           R +L+IAA++DYEIWQMDVKTAFL+G+LDE +YM QP+GF++      +CKL +SIYGLK
Sbjct: 443 RIVLAIAAYFDYEIWQMDVKTAFLSGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLK 502

Query: 261 QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
           QASRSWN  FD+ IK+ GF +  +E CVYKK NGS ++FL+LYVDDILLIGN + ML SV
Sbjct: 503 QASRSWNIRFDEVIKALGFVKNEEEPCVYKKINGSALMFLILYVDDILLIGNDIPMLESV 562

Query: 81  KDWLSQRFDMKDLGEAAHILGIKLMRD 1
           K  L   F MKDLGEAA+ILGI++ RD
Sbjct: 563 KTSLKNSFSMKDLGEAAYILGIRIYRD 589


>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 655

 Score =  193 bits (490), Expect = 6e-47
 Identities = 94/147 (63%), Positives = 117/147 (79%)
 Frame = -1

Query: 441 RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
           R +L+IAA++DYEIWQMDVKTAFL+G+LDE +YM QP+GF++      +CKL +SIYGLK
Sbjct: 398 RIVLAIAAYFDYEIWQMDVKTAFLSGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLK 457

Query: 261 QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
           QASRSWN  FD+ IK+ GF +  +E CVYKK NGS ++FL+LYVDDILLIGN + ML SV
Sbjct: 458 QASRSWNIRFDEVIKALGFVKNEEEPCVYKKINGSALMFLILYVDDILLIGNDIPMLESV 517

Query: 81  KDWLSQRFDMKDLGEAAHILGIKLMRD 1
           K  L   F MKDLGEAA+ILGI++ RD
Sbjct: 518 KTSLKNSFSMKDLGEAAYILGIRIYRD 544


>ref|XP_004978922.1| PREDICTED: uncharacterized protein LOC101776990, partial [Setaria
           italica]
          Length = 1686

 Score =  192 bits (489), Expect = 8e-47
 Identities = 96/147 (65%), Positives = 115/147 (78%)
 Frame = -1

Query: 441 RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
           R +L+IAA++DYEIWQMDVKTAFLNG+L + +YM QPEGF++      +CKL RSIYGLK
Sbjct: 300 RIILAIAAYFDYEIWQMDVKTAFLNGNLAKDVYMIQPEGFVDPKNAGKVCKLQRSIYGLK 359

Query: 261 QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
           QASRSWN  FD+ +K F F +  +ESCVYKK +GS VVFL+LYVDDILLIGN + ML SV
Sbjct: 360 QASRSWNIRFDEVVKGFDFTKNEEESCVYKKVSGSSVVFLILYVDDILLIGNNILMLESV 419

Query: 81  KDWLSQRFDMKDLGEAAHILGIKLMRD 1
           K  L   F M DLGEAA+ILGIK+ RD
Sbjct: 420 KTSLKNSFSMMDLGEAAYILGIKIYRD 446


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  191 bits (485), Expect = 2e-46
 Identities = 95/147 (64%), Positives = 114/147 (77%)
 Frame = -1

Query: 441  RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
            R +L+IAA++DYEIWQMDVKTAFLNG L E +YM QPEGF++    + +CKL +SIYGLK
Sbjct: 885  RIILAIAAYFDYEIWQMDVKTAFLNGKLSEDVYMTQPEGFVDPNNASKVCKLQKSIYGLK 944

Query: 261  QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
            QASRSWN  FD+ IK FGF +  +E CVY K +GS +V L+LYVDDILLIGN + ML SV
Sbjct: 945  QASRSWNIRFDEEIKRFGFVKNKEEPCVYMKVSGSTLVILILYVDDILLIGNDIPMLESV 1004

Query: 81   KDWLSQRFDMKDLGEAAHILGIKLMRD 1
            K  L   F MKDLGEAA+ILGIK+ RD
Sbjct: 1005 KASLKNSFSMKDLGEAAYILGIKIYRD 1031


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  190 bits (483), Expect = 4e-46
 Identities = 93/147 (63%), Positives = 116/147 (78%)
 Frame = -1

Query: 441  RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
            R +L+IAA++DYEIWQMDVKTAFLNG+LDE +YM QP+GF++      +CKL +SIY LK
Sbjct: 838  RIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYRLK 897

Query: 261  QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
            QASRSWN  FD+ +K+ GF +  +E CVYKK +GS +VFL+LYVDDILLIGN + ML SV
Sbjct: 898  QASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESV 957

Query: 81   KDWLSQRFDMKDLGEAAHILGIKLMRD 1
            K  L   F MKDLGEAA+ILGI++ RD
Sbjct: 958  KTSLKYSFSMKDLGEAAYILGIRIYRD 984


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  190 bits (483), Expect = 4e-46
 Identities = 93/147 (63%), Positives = 116/147 (78%)
 Frame = -1

Query: 441  RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
            R +L+IAA++DYEIWQMDVKTAFLNG+LDE +YM QP+GF++      +CKL +SIY LK
Sbjct: 751  RIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYRLK 810

Query: 261  QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
            QASRSWN  FD+ +K+ GF +  +E CVYKK +GS +VFL+LYVDDILLIGN + ML SV
Sbjct: 811  QASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESV 870

Query: 81   KDWLSQRFDMKDLGEAAHILGIKLMRD 1
            K  L   F MKDLGEAA+ILGI++ RD
Sbjct: 871  KTSLKYSFSMKDLGEAAYILGIRIYRD 897


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1073

 Score =  190 bits (482), Expect = 5e-46
 Identities = 92/147 (62%), Positives = 117/147 (79%)
 Frame = -1

Query: 441  RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
            R +L+IAA++DYEIWQM+VKTAFLNG+ DE +YM QP+GF++     ++CKL +SIYGLK
Sbjct: 819  RIVLAIAAYFDYEIWQMEVKTAFLNGNHDEDVYMTQPKGFVDLQSAKMICKLQKSIYGLK 878

Query: 261  QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
            QASRSWN  FD+ +K+ GF +  +E CVYKK +GS +VFL+LYVDDILLIGN + ML SV
Sbjct: 879  QASRSWNIRFDELVKALGFLKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESV 938

Query: 81   KDWLSQRFDMKDLGEAAHILGIKLMRD 1
            K  L   F MKDLGEAA+ILGI++ RD
Sbjct: 939  KTSLKNSFSMKDLGEAAYILGIRIYRD 965


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  190 bits (482), Expect = 5e-46
 Identities = 92/147 (62%), Positives = 117/147 (79%)
 Frame = -1

Query: 441  RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
            R +L+IAA++DYEIWQM+VKTAFLNG+ DE +YM QP+GF++     ++CKL +SIYGLK
Sbjct: 809  RIVLAIAAYFDYEIWQMEVKTAFLNGNHDEDVYMTQPKGFVDLQSAKMICKLQKSIYGLK 868

Query: 261  QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
            QASRSWN  FD+ +K+ GF +  +E CVYKK +GS +VFL+LYVDDILLIGN + ML SV
Sbjct: 869  QASRSWNIRFDELVKALGFLKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESV 928

Query: 81   KDWLSQRFDMKDLGEAAHILGIKLMRD 1
            K  L   F MKDLGEAA+ILGI++ RD
Sbjct: 929  KTSLKNSFSMKDLGEAAYILGIRIYRD 955


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 829

 Score =  189 bits (479), Expect = 1e-45
 Identities = 92/147 (62%), Positives = 116/147 (78%)
 Frame = -1

Query: 441  RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
            R +L+IAA+++YEIWQMDVKT FLNG+LDE +YM QP+GF++      +CKL +SIYGLK
Sbjct: 674  RIVLAIAAYFNYEIWQMDVKTTFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLK 733

Query: 261  QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
            QASRSWN  FD+ +K+  F +  +E CVYKK +GS +VFL+LYVDDILLIGN + ML SV
Sbjct: 734  QASRSWNIRFDEVVKALRFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDILMLESV 793

Query: 81   KDWLSQRFDMKDLGEAAHILGIKLMRD 1
            K  L  RF MKDLGEAA+ILGI++ RD
Sbjct: 794  KTSLKNRFSMKDLGEAAYILGIRIYRD 820


>gb|ABF97078.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 649

 Score =  188 bits (478), Expect = 2e-45
 Identities = 90/145 (62%), Positives = 114/145 (78%)
 Frame = -1

Query: 435 LLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLKQA 256
           +L+IA +++Y+IWQMDVKTAFLNG+LDE +YM QP+GF++      +CKL +SIYGLKQA
Sbjct: 268 VLAIATYFNYKIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKRICKLQKSIYGLKQA 327

Query: 255 SRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSVKD 76
           SRSW  CFD+ +K  GF +  +E CVYKK +GS +VFL+LYVDDILLIGN + ML SVK 
Sbjct: 328 SRSWKICFDEVVKVLGFVKNEEEPCVYKKISGSTLVFLILYVDDILLIGNDIPMLESVKT 387

Query: 75  WLSQRFDMKDLGEAAHILGIKLMRD 1
            L   F MKDLGEAA+ILGI++ RD
Sbjct: 388 SLKNSFSMKDLGEAAYILGIRIYRD 412


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  188 bits (478), Expect = 2e-45
 Identities = 92/147 (62%), Positives = 115/147 (78%)
 Frame = -1

Query: 441  RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
            R +L+IAA++DYEIWQMDVKTAFLNG+LDE +YM QP+GF++      +CKL +SIYGLK
Sbjct: 812  RIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLK 871

Query: 261  QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
            QASRSWN  FD+ +K+ GF +  +  CVYKK +GS +VFL+LYVDDILLIGN + ML SV
Sbjct: 872  QASRSWNIRFDEVVKALGFVKNEEVPCVYKKISGSALVFLILYVDDILLIGNDIPMLESV 931

Query: 81   KDWLSQRFDMKDLGEAAHILGIKLMRD 1
               L   F MKDLGEAA+ILGI++ RD
Sbjct: 932  NISLKNSFSMKDLGEAAYILGIRIYRD 958


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  188 bits (478), Expect = 2e-45
 Identities = 92/147 (62%), Positives = 115/147 (78%)
 Frame = -1

Query: 441  RTLLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLK 262
            R +L+IAA++DYEIWQMDVKTAFLNG+LDE +YM QP+GF++      +CKL +SIYGLK
Sbjct: 754  RIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLK 813

Query: 261  QASRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSV 82
            QASRSWN  FD+ +K+ GF +  +  CVYKK +GS +VFL+LYVDDILLIGN + ML SV
Sbjct: 814  QASRSWNIRFDEVVKALGFVKNEEVPCVYKKISGSALVFLILYVDDILLIGNDIPMLESV 873

Query: 81   KDWLSQRFDMKDLGEAAHILGIKLMRD 1
               L   F MKDLGEAA+ILGI++ RD
Sbjct: 874  NISLKNSFSMKDLGEAAYILGIRIYRD 900


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  187 bits (475), Expect = 3e-45
 Identities = 92/145 (63%), Positives = 115/145 (79%)
 Frame = -1

Query: 435  LLSIAAHYDYEIWQMDVKTAFLNGSLDECIYMKQPEGFINNG*ENLLCKLNRSIYGLKQA 256
            +L+IAA++DYEIWQM VKTAFLNG+LDE +YM QP+GF +      +CKL++SIYGLKQA
Sbjct: 762  VLAIAAYFDYEIWQMYVKTAFLNGNLDEDVYMTQPKGFDDPQSAKKICKLHQSIYGLKQA 821

Query: 255  SRSWNTCFDQAIKSFGFDQCHDESCVYKKWNGSKVVFLVLYVDDILLIGNCVGMLNSVKD 76
            SRSWN  FD+ +K+ GF +  +E CVYKK +GS +VFL+LYVDDILLIGN + ML SVK 
Sbjct: 822  SRSWNIRFDEVVKALGFVRNEEEPCVYKKISGSALVFLILYVDDILLIGNDISMLESVKT 881

Query: 75   WLSQRFDMKDLGEAAHILGIKLMRD 1
             L   F MKDLGEAA+ILGI++ RD
Sbjct: 882  SLKNSFSMKDLGEAAYILGIRIYRD 906