BLASTX nr result
ID: Jatropha_contig00019524
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00019524
(587 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518964.1| RING-H2 finger protein ATL5M precursor, puta... 140 3e-31
gb|EEE97648.2| hypothetical protein POPTR_0011s15100g, partial [... 123 4e-26
ref|XP_002317036.1| predicted protein [Populus trichocarpa] 123 4e-26
gb|EOY23775.1| RING-H2 finger protein ATL79, putative [Theobroma... 113 3e-23
gb|EEE85334.2| hypothetical protein POPTR_0001s45800g [Populus t... 110 3e-22
gb|EMJ10765.1| hypothetical protein PRUPE_ppa011056mg [Prunus pe... 109 4e-22
ref|XP_002300529.1| predicted protein [Populus trichocarpa] 109 6e-22
ref|XP_002277530.1| PREDICTED: RING-H2 finger protein ATL79 [Vit... 109 6e-22
gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP d... 100 3e-19
gb|ESQ39911.1| hypothetical protein EUTSA_v10001049mg [Eutrema s... 98 2e-18
ref|XP_004309562.1| PREDICTED: RING-H2 finger protein ATL79-like... 97 3e-18
gb|ABD64960.1| zinc finger, C3HC4 type (RING finger) containing ... 96 7e-18
gb|ESQ55707.1| hypothetical protein EUTSA_v10026467mg [Eutrema s... 95 1e-17
gb|ERN08202.1| hypothetical protein AMTR_s00018p00191870 [Ambore... 95 1e-17
ref|NP_199572.1| RING-H2 finger protein ATL79 [Arabidopsis thali... 94 2e-17
ref|XP_006279501.1| hypothetical protein CARUB_v10027259mg [Caps... 94 3e-17
ref|XP_002863330.1| zinc finger family protein [Arabidopsis lyra... 92 7e-17
ref|XP_006282933.1| hypothetical protein CARUB_v10007395mg [Caps... 92 1e-16
ref|XP_002870115.1| zinc finger family protein [Arabidopsis lyra... 92 1e-16
gb|ESR52405.1| hypothetical protein CICLE_v10021802mg [Citrus cl... 89 6e-16
>ref|XP_002518964.1| RING-H2 finger protein ATL5M precursor, putative [Ricinus communis]
gi|223541951|gb|EEF43497.1| RING-H2 finger protein ATL5M
precursor, putative [Ricinus communis]
Length = 205
Score = 140 bits (352), Expect = 3e-31
Identities = 66/89 (74%), Positives = 70/89 (78%)
Frame = -2
Query: 586 PISVYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCR 407
P VY GM+LGGAEA+CAICLSE EGEGIRVLGSCKHGFHVHCIEQWLS H SCPTCR
Sbjct: 105 PTVVYSAGMKLGGAEADCAICLSEFVEGEGIRVLGSCKHGFHVHCIEQWLSCHPSCPTCR 164
Query: 406 RSCLSQETLDCCPRNDLGNTSGQPVPEQL 320
RSCL+ T C P NDL N S QP P Q+
Sbjct: 165 RSCLAPGTSVCWPENDLNNAS-QPPPNQI 192
>gb|EEE97648.2| hypothetical protein POPTR_0011s15100g, partial [Populus
trichocarpa]
Length = 258
Score = 123 bits (308), Expect = 4e-26
Identities = 57/90 (63%), Positives = 63/90 (70%), Gaps = 5/90 (5%)
Frame = -2
Query: 577 VYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCRRSC 398
VY GM+L GAEA+CAICLSE EGEGIRVLG C HGFHVHC+E+WL+ H SCPTCR SC
Sbjct: 113 VYYAGMKLAGAEADCAICLSEFVEGEGIRVLGRCNHGFHVHCVEKWLASHSSCPTCRCSC 172
Query: 397 L-----SQETLDCCPRNDLGNTSGQPVPEQ 323
L S E +CC RN L N S Q Q
Sbjct: 173 LASSLSSPEPANCCARNGLDNNSSQSAEPQ 202
>ref|XP_002317036.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 123 bits (308), Expect = 4e-26
Identities = 57/90 (63%), Positives = 63/90 (70%), Gaps = 5/90 (5%)
Frame = -2
Query: 577 VYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCRRSC 398
VY GM+L GAEA+CAICLSE EGEGIRVLG C HGFHVHC+E+WL+ H SCPTCR SC
Sbjct: 113 VYYAGMKLAGAEADCAICLSEFVEGEGIRVLGRCNHGFHVHCVEKWLASHSSCPTCRCSC 172
Query: 397 L-----SQETLDCCPRNDLGNTSGQPVPEQ 323
L S E +CC RN L N S Q Q
Sbjct: 173 LASSLSSPEPANCCARNGLDNNSSQSAEPQ 202
>gb|EOY23775.1| RING-H2 finger protein ATL79, putative [Theobroma cacao]
Length = 211
Score = 113 bits (283), Expect = 3e-23
Identities = 49/65 (75%), Positives = 54/65 (83%)
Frame = -2
Query: 586 PISVYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCR 407
P VY TG++L GAEAECAICLSE EGEGI+VL CKHGFHV CI+QWLS H+SCPTCR
Sbjct: 119 PTLVYTTGLKLAGAEAECAICLSEFVEGEGIQVLAKCKHGFHVQCIQQWLSSHFSCPTCR 178
Query: 406 RSCLS 392
SCLS
Sbjct: 179 SSCLS 183
>gb|EEE85334.2| hypothetical protein POPTR_0001s45800g [Populus trichocarpa]
Length = 216
Score = 110 bits (274), Expect = 3e-22
Identities = 50/72 (69%), Positives = 54/72 (75%)
Frame = -2
Query: 577 VYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCRRSC 398
VY GM+LGG EA+CAICLSE EGEGIRVLG C HGFHV CIE+WLS H SCPTCRRSC
Sbjct: 113 VYSAGMKLGGVEADCAICLSEFVEGEGIRVLGRCDHGFHVLCIEKWLSSHSSCPTCRRSC 172
Query: 397 LSQETLDCCPRN 362
L+ P N
Sbjct: 173 LASSPTSPEPDN 184
>gb|EMJ10765.1| hypothetical protein PRUPE_ppa011056mg [Prunus persica]
Length = 225
Score = 109 bits (273), Expect = 4e-22
Identities = 51/78 (65%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Frame = -2
Query: 556 LGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCRRSCLSQETLD 377
L GAEAECAICLSE EGEGIRVLG CKHGFH HCI++WLS H SCPTCRR+CL Q
Sbjct: 145 LAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCLPQSPPP 204
Query: 376 CCPRNDLGNTSGQ-PVPE 326
P+ N+S + P PE
Sbjct: 205 SPPQPTTDNSSQRIPAPE 222
>ref|XP_002300529.1| predicted protein [Populus trichocarpa]
Length = 159
Score = 109 bits (272), Expect = 6e-22
Identities = 48/62 (77%), Positives = 52/62 (83%)
Frame = -2
Query: 577 VYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCRRSC 398
VY GM+LGG EA+CAICLSE EGEGIRVLG C HGFHV CIE+WLS H SCPTCRRSC
Sbjct: 92 VYSAGMKLGGVEADCAICLSEFVEGEGIRVLGRCDHGFHVLCIEKWLSSHSSCPTCRRSC 151
Query: 397 LS 392
L+
Sbjct: 152 LA 153
>ref|XP_002277530.1| PREDICTED: RING-H2 finger protein ATL79 [Vitis vinifera]
Length = 187
Score = 109 bits (272), Expect = 6e-22
Identities = 47/64 (73%), Positives = 53/64 (82%)
Frame = -2
Query: 586 PISVYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCR 407
P V+ +GM+L GAEAECAICLSE EGEGIRV+G CKHGFHV CI++WLS H SCPTCR
Sbjct: 106 PTLVFSSGMKLAGAEAECAICLSEFVEGEGIRVMGQCKHGFHVQCIQEWLSSHSSCPTCR 165
Query: 406 RSCL 395
SCL
Sbjct: 166 GSCL 169
>gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 587
Score = 100 bits (249), Expect = 3e-19
Identities = 46/81 (56%), Positives = 54/81 (66%)
Frame = -2
Query: 586 PISVYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCR 407
P VY + + L GAEAECAICLSE E+GE I+VL C HGFHV CI +WLS SCPTCR
Sbjct: 507 PTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCHHGFHVKCIHKWLSSRSSCPTCR 566
Query: 406 RSCLSQETLDCCPRNDLGNTS 344
S Q TLD P + +T+
Sbjct: 567 TSIFLQSTLDSTPSTEAPSTN 587
>gb|ESQ39911.1| hypothetical protein EUTSA_v10001049mg [Eutrema salsugineum]
Length = 175
Score = 97.8 bits (242), Expect = 2e-18
Identities = 46/77 (59%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Frame = -2
Query: 586 PISVYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCR 407
P VY + + L GAEAECAICLSE E+GE I+VL C HGFHV CI +WLS SCPTCR
Sbjct: 91 PTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCHHGFHVKCINKWLSSRSSCPTCR 150
Query: 406 RSCLSQE-TLDCCPRND 359
S SQ+ TLD P +
Sbjct: 151 TSIFSQQHTLDSAPSTE 167
>ref|XP_004309562.1| PREDICTED: RING-H2 finger protein ATL79-like [Fragaria vesca subsp.
vesca]
Length = 217
Score = 97.1 bits (240), Expect = 3e-18
Identities = 45/66 (68%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Frame = -2
Query: 586 PISVYLTGMR--LGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPT 413
P VY M+ L GA AECAICLSE +GEGIRVL CKHGFH HCI+ WLS H SCPT
Sbjct: 127 PTLVYSPEMKAELAGAAAECAICLSEFVDGEGIRVLERCKHGFHSHCIQAWLSSHSSCPT 186
Query: 412 CRRSCL 395
CRR+CL
Sbjct: 187 CRRTCL 192
>gb|ABD64960.1| zinc finger, C3HC4 type (RING finger) containing protein [Brassica
oleracea]
Length = 218
Score = 95.9 bits (237), Expect = 7e-18
Identities = 43/70 (61%), Positives = 48/70 (68%)
Frame = -2
Query: 586 PISVYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCR 407
P VY + + L GA+AECAICLSE E GE I VL C HGFH+ CI +WLS SCPTCR
Sbjct: 134 PTLVYSSDLELAGAQAECAICLSEFEPGESIHVLEKCHHGFHIKCIHKWLSSRSSCPTCR 193
Query: 406 RSCLSQETLD 377
S SQ TLD
Sbjct: 194 TSIFSQNTLD 203
>gb|ESQ55707.1| hypothetical protein EUTSA_v10026467mg [Eutrema salsugineum]
Length = 154
Score = 95.1 bits (235), Expect = 1e-17
Identities = 40/65 (61%), Positives = 48/65 (73%)
Frame = -2
Query: 586 PISVYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCR 407
P VY G+ L GAEAEC ICLSE E+G+ +RVL CKHGFH+HCI+QW S + SCPTCR
Sbjct: 84 PTLVYSPGLNLAGAEAECIICLSEFEDGDTLRVLDRCKHGFHIHCIQQWFSSNPSCPTCR 143
Query: 406 RSCLS 392
+ S
Sbjct: 144 TNIFS 148
>gb|ERN08202.1| hypothetical protein AMTR_s00018p00191870 [Amborella trichopoda]
Length = 186
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/68 (61%), Positives = 49/68 (72%)
Frame = -2
Query: 586 PISVYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCR 407
P VY GM L G+ AECAICL+E +GE IRVL +C HGFH C+E+WL+ H SCPTCR
Sbjct: 115 PALVYSAGMGLPGSVAECAICLTEFCDGERIRVLPNCGHGFHAGCVERWLAAHVSCPTCR 174
Query: 406 RSCLSQET 383
RSCL T
Sbjct: 175 RSCLPSAT 182
>ref|NP_199572.1| RING-H2 finger protein ATL79 [Arabidopsis thaliana]
gi|68565286|sp|Q9FGJ6.1|ATL79_ARATH RecName:
Full=RING-H2 finger protein ATL79; Flags: Precursor
gi|9758789|dbj|BAB09087.1| unnamed protein product
[Arabidopsis thaliana] gi|21553634|gb|AAM62727.1|
unknown [Arabidopsis thaliana]
gi|51969080|dbj|BAD43232.1| unknown protein [Arabidopsis
thaliana] gi|51971483|dbj|BAD44406.1| unknown protein
[Arabidopsis thaliana] gi|98960905|gb|ABF58936.1|
At5g47610 [Arabidopsis thaliana]
gi|332008154|gb|AED95537.1| RING-H2 finger protein ATL79
[Arabidopsis thaliana]
Length = 166
Score = 94.4 bits (233), Expect = 2e-17
Identities = 42/68 (61%), Positives = 49/68 (72%)
Frame = -2
Query: 586 PISVYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCR 407
P VY + + L GAEAECAICLSE E+GE I+VL C+HGFHV CI +WLS SCPTCR
Sbjct: 90 PTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCR 149
Query: 406 RSCLSQET 383
S SQ +
Sbjct: 150 TSIFSQHS 157
>ref|XP_006279501.1| hypothetical protein CARUB_v10027259mg [Capsella rubella]
gi|482548205|gb|EOA12399.1| hypothetical protein
CARUB_v10027259mg [Capsella rubella]
Length = 166
Score = 94.0 bits (232), Expect = 3e-17
Identities = 42/66 (63%), Positives = 48/66 (72%)
Frame = -2
Query: 586 PISVYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCR 407
P VY + + L GAEAECAICLSE E+GE I+VL C+HGFHV CI +WLS SCPTCR
Sbjct: 90 PTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSSRSSCPTCR 149
Query: 406 RSCLSQ 389
S SQ
Sbjct: 150 TSIFSQ 155
>ref|XP_002863330.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297309165|gb|EFH39589.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 166
Score = 92.4 bits (228), Expect = 7e-17
Identities = 41/68 (60%), Positives = 48/68 (70%)
Frame = -2
Query: 586 PISVYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCR 407
P VY + + L GAEAECAICLSE E+GE I+VL C+HGFHV CI +WLS SCPTCR
Sbjct: 90 PTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCR 149
Query: 406 RSCLSQET 383
SQ +
Sbjct: 150 TCIFSQHS 157
>ref|XP_006282933.1| hypothetical protein CARUB_v10007395mg [Capsella rubella]
gi|482551638|gb|EOA15831.1| hypothetical protein
CARUB_v10007395mg [Capsella rubella]
Length = 170
Score = 92.0 bits (227), Expect = 1e-16
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = -2
Query: 586 PISVYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWL-SRHYSCPTC 410
P VY GM L G EAEC ICLSE ++G+ +RVL CKHGFHVHCI++WL S H SCPTC
Sbjct: 87 PTLVYSPGMNLAGTEAECIICLSEFQDGDTLRVLERCKHGFHVHCIQKWLSSSHSSCPTC 146
Query: 409 RRSCLS 392
R + S
Sbjct: 147 RANIFS 152
>ref|XP_002870115.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297315951|gb|EFH46374.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 166
Score = 91.7 bits (226), Expect = 1e-16
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = -2
Query: 586 PISVYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWL-SRHYSCPTC 410
P VY G+ L G EAEC ICLSE ++G+ +RVL CKHGFHVHCI+QWL S H SCPTC
Sbjct: 85 PTLVYSPGLNLAGNEAECIICLSEFQDGDTLRVLERCKHGFHVHCIQQWLSSSHSSCPTC 144
Query: 409 RRSCLS 392
R + S
Sbjct: 145 RTNIFS 150
>gb|ESR52405.1| hypothetical protein CICLE_v10021802mg [Citrus clementina]
Length = 256
Score = 89.4 bits (220), Expect = 6e-16
Identities = 39/65 (60%), Positives = 46/65 (70%)
Frame = -2
Query: 577 VYLTGMRLGGAEAECAICLSELEEGEGIRVLGSCKHGFHVHCIEQWLSRHYSCPTCRRSC 398
VY G++L GAEAEC ICLSE G+ I+VL CKHGFH CI++WL HYSCP CR +C
Sbjct: 182 VYSAGIKLTGAEAECVICLSEFVAGDVIQVLERCKHGFHSQCIQKWLYSHYSCPICRCNC 241
Query: 397 LSQET 383
L T
Sbjct: 242 LFSPT 246