BLASTX nr result
ID: Jatropha_contig00019516
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00019516
(616 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_039434.1| hypothetical protein OrsajCp077 [Oryza sativa J... 64 2e-13
gb|ERM97518.1| hypothetical protein AMTR_s05231p00006790, partia... 79 1e-12
ref|YP_052803.1| hypothetical protein OrniCp077 [Oryza nivara] g... 78 2e-12
ref|NP_043100.1| hypothetical protein ZemaCp099 [Zea mays] gi|50... 75 1e-11
gb|ERN16192.1| hypothetical protein AMTR_s00030p00239160 [Ambore... 74 2e-11
ref|YP_003208240.1| hypothetical protein ColajoC_p078 [Coix lacr... 73 5e-11
gb|AGV55569.1| hypothetical protein (chloroplast) [Arbutus unedo... 64 1e-09
ref|YP_004564419.1| hypothetical chloroplast RF15 (chloroplast) ... 62 2e-09
sp|Q1KXP9.1|YCF15_HELAN RecName: Full=Putative uncharacterized p... 62 2e-09
ref|YP_004465234.1| hypothetical chloroplast RF15 [Jacobaea vulg... 66 6e-09
ref|NP_054550.1| hypothetical protein NitaCp076 [Nicotiana tabac... 65 1e-08
ref|YP_007624842.1| Ycf15 protein (chloroplast) [Artemisia frigi... 59 1e-08
gb|ABD47279.1| hypothetical chloroplast RF15 [Lactuca sativa] gi... 62 2e-08
ref|YP_004841830.1| hypothetical chloroplast protein [Cucumis me... 61 6e-08
ref|XP_003622889.1| 30S ribosomal protein S12 [Medicago truncatu... 61 2e-07
ref|YP_001152246.1| ORF67g [Pinus koraiensis] gi|145048871|gb|AB... 60 4e-07
ref|NP_063977.1| orf146 gene product (mitochondrion) [Beta vulga... 59 1e-06
ref|YP_004842111.1| hypothetical protein BemaM_p066 [Beta macroc... 59 1e-06
>ref|NP_039434.1| hypothetical protein OrsajCp077 [Oryza sativa Japonica Group]
gi|11466859|ref|NP_039456.1| hypothetical protein
OrsajCp101 [Oryza sativa Japonica Group]
gi|12039|emb|CAA33943.1| unnamed protein product [Oryza
sativa Japonica Group] gi|12063|emb|CAA33917.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|226659|prf||1603356CK ORF 71
Length = 71
Score = 63.5 bits (153), Expect(2) = 2e-13
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = +2
Query: 389 HMVS*QNL*LAILLPSKQRFTSVERMIHSDRHESPTTLHCQ 511
H++ QN LAILLP++QR TSVERMIHSDR+E PTTLHC+
Sbjct: 9 HVLPRQNFELAILLPNRQRLTSVERMIHSDRYEDPTTLHCR 49
Score = 38.5 bits (88), Expect(2) = 2e-13
Identities = 21/27 (77%), Positives = 21/27 (77%)
Frame = +3
Query: 495 LHCIARIHVVYLKEVDLLASLMVQSFS 575
LHC RIHV YLK VDL ASLMVQS S
Sbjct: 46 LHC--RIHVPYLKRVDLCASLMVQSSS 70
>gb|ERM97518.1| hypothetical protein AMTR_s05231p00006790, partial [Amborella
trichopoda]
Length = 77
Score = 78.6 bits (192), Expect = 1e-12
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +2
Query: 2 APRNIAPPTPSGQSYEPLIYSHSITPAGEQVKIEKLTLGLGIIRLEL 142
APRNIA PTPS QS+EPLI+SHSIT AGEQVKIEKLTLGLGIIRLEL
Sbjct: 26 APRNIAIPTPSRQSHEPLIHSHSIT-AGEQVKIEKLTLGLGIIRLEL 71
>ref|YP_052803.1| hypothetical protein OrniCp077 [Oryza nivara]
gi|50234052|ref|YP_052829.1| hypothetical protein
OrniCp103 [Oryza nivara]
gi|556927137|ref|YP_008757491.1| hypothetical protein
(chloroplast) [Oryza rufipogon]
gi|556927165|ref|YP_008757519.1| hypothetical protein
(chloroplast) [Oryza rufipogon]
gi|49615050|dbj|BAD26833.1| unnamed protein product
[Oryza nivara] gi|49615076|dbj|BAD26859.1| unnamed
protein product [Oryza nivara]
gi|552954529|gb|AGY48997.1| hypothetical protein
(chloroplast) [Oryza rufipogon]
gi|552954557|gb|AGY49025.1| hypothetical protein
(chloroplast) [Oryza rufipogon]
Length = 85
Score = 77.8 bits (190), Expect = 2e-12
Identities = 35/48 (72%), Positives = 41/48 (85%)
Frame = +2
Query: 389 HMVS*QNL*LAILLPSKQRFTSVERMIHSDRHESPTTLHCQNPCCIFE 532
H++ QN LAILLP++QR TSVER+IHSDR+E PTTLHCQNPC IFE
Sbjct: 36 HVLPRQNFELAILLPNRQRLTSVERLIHSDRYEDPTTLHCQNPCSIFE 83
>ref|NP_043100.1| hypothetical protein ZemaCp099 [Zea mays]
gi|50812584|ref|YP_054685.1| hypothetical protein
SaofCp079 [Saccharum hybrid cultivar NCo 310]
gi|50812607|ref|YP_054708.1| hypothetical protein
SaofCp102 [Saccharum hybrid cultivar NCo 310]
gi|902297|emb|CAA60361.1| hypothetical protein [Zea
mays] gi|49659568|dbj|BAD27349.1| hypothetical protein
[Saccharum hybrid cultivar NCo 310]
gi|49659591|dbj|BAD27372.1| hypothetical protein
[Saccharum hybrid cultivar NCo 310]
Length = 58
Score = 75.5 bits (184), Expect = 1e-11
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = +2
Query: 389 HMVS*QNL*LAILLPSKQRFTSVERMIHSDRHESPTTLHCQNPCCIFE 532
H++ QN LAILLP++QR TSVER+IHSDR+E PT LHCQNPC IFE
Sbjct: 9 HVLPRQNFELAILLPNRQRLTSVERLIHSDRYEDPTPLHCQNPCSIFE 56
>gb|ERN16192.1| hypothetical protein AMTR_s00030p00239160 [Amborella trichopoda]
Length = 89
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = +1
Query: 4 SKKYSPPYPLGSILRASYLLPFDHAGGGTSQNRKTHIGFRDNQARTDDFHHVKVTLYR 177
+++YS YPL S+ +ASY FDH GGG SQN+K IGFRDN ART +FHHVKVTL R
Sbjct: 33 TQQYSHSYPLKSLPQASYAFSFDH-GGGASQNKKACIGFRDNHARTYEFHHVKVTLDR 89
>ref|YP_003208240.1| hypothetical protein ColajoC_p078 [Coix lacryma-jobi]
gi|260677401|ref|YP_003208261.1| hypothetical protein
ColajoC_p099 [Coix lacryma-jobi]
gi|209361330|gb|ACI43245.1| unknown [Coix lacryma-jobi]
gi|209361339|gb|ACI43254.1| unknown [Coix lacryma-jobi]
Length = 58
Score = 73.2 bits (178), Expect = 5e-11
Identities = 33/48 (68%), Positives = 39/48 (81%)
Frame = +2
Query: 389 HMVS*QNL*LAILLPSKQRFTSVERMIHSDRHESPTTLHCQNPCCIFE 532
H++ QN LAILLP++QR T VER+IHSDR+E PT LHCQNPC IFE
Sbjct: 9 HVLPRQNFELAILLPNRQRLTYVERLIHSDRYEDPTPLHCQNPCSIFE 56
>gb|AGV55569.1| hypothetical protein (chloroplast) [Arbutus unedo]
gi|543383047|gb|AGV55582.1| hypothetical protein
(chloroplast) [Arbutus unedo]
Length = 63
Score = 64.3 bits (155), Expect(2) = 1e-09
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +3
Query: 483 MRVLLHCIARIHVVYLKEVDLLASLMVQSFSR*APF 590
MRV LHCIARIHVVYLKEVDLLASLMVQS SR APF
Sbjct: 1 MRVQLHCIARIHVVYLKEVDLLASLMVQSSSRRAPF 36
Score = 24.6 bits (52), Expect(2) = 1e-09
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 581 SPFLLGPQRQN 613
+PF LGPQRQN
Sbjct: 34 APFFLGPQRQN 44
>ref|YP_004564419.1| hypothetical chloroplast RF15 (chloroplast) [Ageratina adenophora]
gi|334701863|ref|YP_004564431.1| hypothetical
chloroplast RF15 (chloroplast) [Ageratina adenophora]
gi|334089722|gb|AEG64605.1| hypothetical chloroplast
RF15 (chloroplast) [Ageratina adenophora]
gi|334089734|gb|AEG64617.1| hypothetical chloroplast
RF15 (chloroplast) [Ageratina adenophora]
Length = 63
Score = 62.0 bits (149), Expect(2) = 2e-09
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = +3
Query: 483 MRVLLHCIARIHVVYLKEVDLLASLMVQSFSR*APF 590
MRV LHCIARIHVVYLKEVDLLASL VQS SR APF
Sbjct: 1 MRVQLHCIARIHVVYLKEVDLLASLTVQSSSRRAPF 36
Score = 26.2 bits (56), Expect(2) = 2e-09
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 581 SPFLLGPQRQN 613
+PFLLGPQRQN
Sbjct: 34 APFLLGPQRQN 44
>sp|Q1KXP9.1|YCF15_HELAN RecName: Full=Putative uncharacterized protein ycf15
gi|88656941|gb|ABD47192.1| hypothetical chloroplast RF15
[Helianthus annuus] gi|88656954|gb|ABD47205.1|
hypothetical chloroplast RF15 [Helianthus annuus]
Length = 53
Score = 62.0 bits (149), Expect(2) = 2e-09
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = +3
Query: 483 MRVLLHCIARIHVVYLKEVDLLASLMVQSFSR*APF 590
MRV LHCIARIHVVYLKEVDLLASL VQS SR APF
Sbjct: 1 MRVQLHCIARIHVVYLKEVDLLASLTVQSSSRRAPF 36
Score = 26.2 bits (56), Expect(2) = 2e-09
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 581 SPFLLGPQRQN 613
+PFLLGPQRQN
Sbjct: 34 APFLLGPQRQN 44
>ref|YP_004465234.1| hypothetical chloroplast RF15 [Jacobaea vulgaris]
gi|334702386|ref|YP_004465248.1| hypothetical
chloroplast RF15 [Jacobaea vulgaris]
gi|308156130|gb|ADO15458.1| hypothetical chloroplast
RF15 [Jacobaea vulgaris] gi|308156144|gb|ADO15472.1|
hypothetical chloroplast RF15 [Jacobaea vulgaris]
Length = 44
Score = 66.2 bits (160), Expect = 6e-09
Identities = 34/44 (77%), Positives = 36/44 (81%)
Frame = +3
Query: 483 MRVLLHCIARIHVVYLKEVDLLASLMVQSFSR*APFSSVHRDKI 614
MRV LHCIA IHV+YLKEVDLLA L VQS SR APF VHRDK+
Sbjct: 1 MRVQLHCIAGIHVIYLKEVDLLAFLTVQSSSRRAPFLLVHRDKM 44
>ref|NP_054550.1| hypothetical protein NitaCp076 [Nicotiana tabacum]
gi|11466024|ref|NP_054566.1| hypothetical protein
NitaCp092 [Nicotiana tabacum]
gi|78102590|ref|YP_358729.1| hypothetical protein
NisyCp085 [Nicotiana sylvestris]
gi|78102609|ref|YP_358748.1| hypothetical protein
NisyCp106 [Nicotiana sylvestris]
gi|81301620|ref|YP_398915.1| hypothetical protein
NitoCp084 [Nicotiana tomentosiformis]
gi|81301639|ref|YP_398934.1| hypothetical protein
NitoCp105 [Nicotiana tomentosiformis]
gi|351653932|ref|YP_004891658.1| unnamed protein product
(chloroplast) [Nicotiana undulata]
gi|351653950|ref|YP_004891677.1| unnamed protein product
(chloroplast) [Nicotiana undulata]
gi|11879|emb|CAA77392.1| hypothetical protein [Nicotiana
tabacum] gi|1223680|emb|CAA77401.1| hypothetical protein
[Nicotiana tabacum] gi|77799617|dbj|BAE46706.1|
hypothetical protein [Nicotiana sylvestris]
gi|77799636|dbj|BAE46725.1| hypothetical protein
[Nicotiana sylvestris] gi|80750979|dbj|BAE48055.1|
hypothetical protein [Nicotiana tomentosiformis]
gi|80750998|dbj|BAE48074.1| hypothetical protein
[Nicotiana tomentosiformis] gi|347453958|gb|AEO95616.1|
hypothetical protein (chloroplast) [Nicotiana undulata]
gi|347453976|gb|AEO95634.1| hypothetical protein
(chloroplast) [Nicotiana undulata]
gi|225249|prf||1211235CH ORF 131
Length = 131
Score = 65.5 bits (158), Expect = 1e-08
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +2
Query: 389 HMVS*QNL*LAILLPSKQRFTSVERMIHSDRHESPTTL 502
H++ QNL LAILLPS+QRFTSVERMIHSDRHESPTTL
Sbjct: 87 HVLPRQNLELAILLPSRQRFTSVERMIHSDRHESPTTL 124
>ref|YP_007624842.1| Ycf15 protein (chloroplast) [Artemisia frigida]
gi|470227769|ref|YP_007624855.1| Ycf15 protein
(chloroplast) [Artemisia frigida]
gi|401712244|gb|AFP98869.1| Ycf15 protein (chloroplast)
[Artemisia frigida] gi|401712257|gb|AFP98882.1| Ycf15
protein (chloroplast) [Artemisia frigida]
Length = 63
Score = 59.3 bits (142), Expect(2) = 1e-08
Identities = 31/36 (86%), Positives = 31/36 (86%)
Frame = +3
Query: 483 MRVLLHCIARIHVVYLKEVDLLASLMVQSFSR*APF 590
MRV LHCIARIHVVYLKEVD LASL VQS SR APF
Sbjct: 1 MRVQLHCIARIHVVYLKEVDPLASLTVQSSSRRAPF 36
Score = 26.2 bits (56), Expect(2) = 1e-08
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 581 SPFLLGPQRQN 613
+PFLLGPQRQN
Sbjct: 34 APFLLGPQRQN 44
>gb|ABD47279.1| hypothetical chloroplast RF15 [Lactuca sativa]
gi|88657042|gb|ABD47292.1| hypothetical chloroplast RF15
[Lactuca sativa]
Length = 63
Score = 62.0 bits (149), Expect(2) = 2e-08
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = +3
Query: 483 MRVLLHCIARIHVVYLKEVDLLASLMVQSFSR*APF 590
MRV LHCIARIHVVYLKEVDLLASL VQS SR APF
Sbjct: 1 MRVQLHCIARIHVVYLKEVDLLASLTVQSSSRGAPF 36
Score = 22.7 bits (47), Expect(2) = 2e-08
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 581 SPFLLGPQRQN 613
+PFLL PQRQN
Sbjct: 34 APFLLCPQRQN 44
>ref|YP_004841830.1| hypothetical chloroplast protein [Cucumis melo subsp. melo]
gi|346578253|ref|YP_004841844.1| hypothetical
chloroplast protein [Cucumis melo subsp. melo]
gi|344030539|gb|AEM76940.1| hypothetical chloroplast
protein [Cucumis melo subsp. melo]
gi|344030553|gb|AEM76954.1| hypothetical chloroplast
protein [Cucumis melo subsp. melo]
Length = 63
Score = 61.2 bits (147), Expect(2) = 6e-08
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +3
Query: 483 MRVLLHCIARIHVVYLKEVDLLASLMVQSFSR*APF 590
MRV LHCIARIHVVYLKEVDLLASLM+QS S APF
Sbjct: 1 MRVQLHCIARIHVVYLKEVDLLASLMLQSSSHRAPF 36
Score = 21.9 bits (45), Expect(2) = 6e-08
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 581 SPFLLGPQRQN 613
+PFLL PQR+N
Sbjct: 34 APFLLDPQRKN 44
>ref|XP_003622889.1| 30S ribosomal protein S12 [Medicago truncatula]
gi|355497904|gb|AES79107.1| 30S ribosomal protein S12
[Medicago truncatula]
Length = 195
Score = 61.2 bits (147), Expect = 2e-07
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +1
Query: 460 KDDSFGST*ESYYIALPESMLYI*KKLTSLLLSWYNPFLAEPLSPR 597
KDDSF ST ES +IALP+SMLYI K+LTSLLL WYNP A LSP+
Sbjct: 21 KDDSFRSTSESNHIALPKSMLYI-KRLTSLLLGWYNPLAAFLLSPQ 65
>ref|YP_001152246.1| ORF67g [Pinus koraiensis] gi|145048871|gb|ABP35486.1| ORF67g [Pinus
koraiensis]
Length = 67
Score = 60.5 bits (145), Expect = 4e-07
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = -2
Query: 195 GGGYNSAVECHLDVVEVVSSSLIIPKPNVSFSI 97
G GYNSAVECHLD+VEV+SSSLIIPKPNVS SI
Sbjct: 4 GKGYNSAVECHLDMVEVISSSLIIPKPNVSPSI 36
>ref|NP_063977.1| orf146 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435088|ref|YP_004222306.1| hypothetical protein
BevumaM_p071 [Beta vulgaris subsp. maritima]
gi|9049279|dbj|BAA99289.1| orf146 [Beta vulgaris subsp.
vulgaris] gi|317905641|emb|CBJ14042.1| hypothetical
protein [Beta vulgaris subsp. maritima]
gi|319439821|emb|CBJ17533.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|384977900|emb|CBL54124.1|
hypothetical protein (mitochondrion) [Beta vulgaris
subsp. maritima]
Length = 146
Score = 58.9 bits (141), Expect = 1e-06
Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +2
Query: 389 HMVS*QNL*LAILLPSKQRFTSVERMIHSDRHESPTTLHCQNPCCIFERS*PPCFSHGTI 568
H++ QN LAILLPS+QR TSVERMIHS R + LHC C+ +H
Sbjct: 51 HVLPRQNFELAILLPSRQRLTSVERMIHSIRIDMRVQLHCIARICVVYLK---MINHLAS 107
Query: 569 LFSLS-----PFLLGPQRQN 613
L S P LLGPQRQN
Sbjct: 108 LIVQSSSRRAPLLLGPQRQN 127
>ref|YP_004842111.1| hypothetical protein BemaM_p066 [Beta macrocarpa]
gi|345500097|emb|CBX24915.1| hypothetical protein [Beta
macrocarpa]
Length = 146
Score = 58.9 bits (141), Expect = 1e-06
Identities = 38/80 (47%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +2
Query: 389 HMVS*QNL*LAILLPSKQRFTSVERMIHSDRHESPTTLHCQNPCCIFERS*PPCFSHGTI 568
H++ QN LAILLPS+QR TSVERMIHS R + LHC C+ +H
Sbjct: 51 HVLPRQNFELAILLPSRQRLTSVERMIHSIRIDMRVQLHCIARICVVYLK---MINHLAS 107
Query: 569 LFSLS-----PFLLGPQRQN 613
L S P LLGPQRQN
Sbjct: 108 LIVQSSSRRAPLLLGPQRQN 127