BLASTX nr result

ID: Jatropha_contig00019474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00019474
         (214 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604156.1| Cell wall-associated hydrolase [Medicago tru...    86   6e-15
gb|ACG28338.1| hypothetical protein [Zea mays]                         59   3e-11
ref|XP_003564215.1| PREDICTED: uncharacterized protein LOC100832...    59   3e-11
gb|AGV54820.1| cell wall-associated hydrolase [Phaseolus vulgaris]     68   1e-09
ref|XP_003637074.1| Cell wall-associated hydrolase, partial [Med...    58   1e-06

>ref|XP_003604156.1| Cell wall-associated hydrolase [Medicago truncatula]
           gi|355505211|gb|AES86353.1| Cell wall-associated
           hydrolase [Medicago truncatula]
          Length = 375

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 48/70 (68%), Positives = 48/70 (68%)
 Frame = -2

Query: 213 RPIETVYLRLSLGP*VLTQG*NXXXXXXXSH*WLGPPRKGAFFAFHLSCAGKAQSQSQGT 34
           RPIETVYLRLSLG                   W  PPRK AFFAFHLSCAGKAQSQSQGT
Sbjct: 174 RPIETVYLRLSLGLY-----------------WHKPPRKEAFFAFHLSCAGKAQSQSQGT 216

Query: 33  VKLHRVFLSR 4
           VKLHRVFLSR
Sbjct: 217 VKLHRVFLSR 226


>gb|ACG28338.1| hypothetical protein [Zea mays]
          Length = 79

 Score = 59.3 bits (142), Expect(2) = 3e-11
 Identities = 31/59 (52%), Positives = 33/59 (55%)
 Frame = +3

Query: 6   WTERPYEASLFPGIXXXXXXXXXXXXXXXXXXXXVRAISEIPLWKS*NSNLVSGPTGQG 182
           WTERPYEA LFPGI                     RAISEIPLWKS +SNLVS P  +G
Sbjct: 11  WTERPYEALLFPGIGFGLFLRSLGGRRRRPPSGGARAISEIPLWKSSDSNLVSDPRAKG 69



 Score = 34.3 bits (77), Expect(2) = 3e-11
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +1

Query: 157 LCQDLRAKGQSQVDSFYGA 213
           L  D RAKGQSQVDSFYGA
Sbjct: 61  LVSDPRAKGQSQVDSFYGA 79


>ref|XP_003564215.1| PREDICTED: uncharacterized protein LOC100832742 [Brachypodium
           distachyon] gi|149392539|gb|ABR26072.1| imp biosynthesis
           protein [Oryza sativa Indica Group]
          Length = 79

 Score = 59.3 bits (142), Expect(2) = 3e-11
 Identities = 31/59 (52%), Positives = 33/59 (55%)
 Frame = +3

Query: 6   WTERPYEASLFPGIXXXXXXXXXXXXXXXXXXXXVRAISEIPLWKS*NSNLVSGPTGQG 182
           WTERPYEA LFPGI                     RAISEIPLWKS +SNLVS P  +G
Sbjct: 11  WTERPYEALLFPGIGFGPFLRSLGGRRRRPPSGGARAISEIPLWKSSDSNLVSDPRAKG 69



 Score = 34.3 bits (77), Expect(2) = 3e-11
 Identities = 16/19 (84%), Positives = 16/19 (84%)
 Frame = +1

Query: 157 LCQDLRAKGQSQVDSFYGA 213
           L  D RAKGQSQVDSFYGA
Sbjct: 61  LVSDPRAKGQSQVDSFYGA 79


>gb|AGV54820.1| cell wall-associated hydrolase [Phaseolus vulgaris]
          Length = 425

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 44/82 (53%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
 Frame = -2

Query: 213 RPIETVYLRLSLGP------------*VLTQG*NXXXXXXXSH*WLGPPRKGAFFAFHLS 70
           RPIETVYLRLS GP              LT G               PP+K AFFA H+ 
Sbjct: 191 RPIETVYLRLSPGPYWHKVRIPTLPEWYLTDG--------------LPPQKKAFFALHIR 236

Query: 69  CAGKAQSQSQGTVKLHRVFLSR 4
           CAGKAQSQSQ TVKL RVFLSR
Sbjct: 237 CAGKAQSQSQETVKLQRVFLSR 258


>ref|XP_003637074.1| Cell wall-associated hydrolase, partial [Medicago truncatula]
           gi|355503009|gb|AES84212.1| Cell wall-associated
           hydrolase, partial [Medicago truncatula]
          Length = 733

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = -1

Query: 214 TPHRNCLPETVPWPVGPDTRLEF 146
           TPHRNCLPETVPWPVGPDTRLEF
Sbjct: 119 TPHRNCLPETVPWPVGPDTRLEF 141


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