BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00019380
         (722 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY01054.1| RNA-directed DNA polymerase (Reverse transcriptas...   102   3e-21
gb|EOX94716.1| RNA-directed DNA polymerase (Reverse transcriptas...   102   4e-21
gb|EOY10467.1| RNA-directed DNA polymerase (Reverse transcriptas...   102   4e-21
gb|EOY03806.1| RNA-directed DNA polymerase [Theobroma cacao]          100   2e-20
gb|EOX94216.1| RNA-directed DNA polymerase [Theobroma cacao]          100   2e-20
gb|EOY20481.1| RNA-directed DNA polymerase (Reverse transcriptas...   100   7e-20
gb|EOY19960.1| RNA-directed DNA polymerase, putative [Theobroma ...   102   9e-20
gb|EOY21231.1| RNA-directed DNA polymerase [Theobroma cacao]           99   2e-19
gb|EOY15725.1| RNA-directed DNA polymerase (Reverse transcriptas...    99   2e-19
gb|EOY22161.1| RNA-directed DNA polymerase (Reverse transcriptas...    96   3e-19
dbj|BAJ53209.1| JHL23C09.1 [Jatropha curcas]                           92   7e-19
gb|EOX95167.1| RNA-directed DNA polymerase (Reverse transcriptas...    97   7e-19
gb|EOY20987.1| RNA-directed DNA polymerase (Reverse transcriptas...   100   8e-19
gb|EOY26501.1| RNA-directed DNA polymerase (Reverse transcriptas...    94   2e-18
gb|EOY13888.1| RNA-directed DNA polymerase [Theobroma cacao]           92   2e-18
gb|EOY09277.1| RNA-directed DNA polymerase (Reverse transcriptas...    96   2e-18
gb|EOY28052.1| RNA-directed DNA polymerase (Reverse transcriptas...    96   2e-18
gb|EOY10681.1| Uncharacterized protein TCM_025982 [Theobroma cacao]    98   2e-18
gb|EOY21879.1| RNA-directed DNA polymerase (Reverse transcriptas...    92   4e-18
gb|EOY20400.1| RNA-directed DNA polymerase (Reverse transcriptas...    91   1e-17

>gb|EOY01054.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
            [Theobroma cacao]
          Length = 1047

 Score =  102 bits (254), Expect(2) = 3e-21
 Identities = 53/121 (43%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1    LPTEIEVQSLHITK*WNPRFQNSQ*RPQN-HYQELALLDEKILNARFIDQLYKRRIVKHF 177
            LP E+E+ SL + K      Q  +    N  Y++L L++EK L A    QLY++R+++ +
Sbjct: 919  LPIEVEIPSLRVLK----EVQLEEAEWVNARYEQLNLIEEKRLTALCHGQLYQKRMMRAY 974

Query: 178  NKRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSP 357
            +K+ HS+  + G+LVLK++ PN HDLRGK+ PNWEGPF++KK FS GAL L++M+     
Sbjct: 975  DKKAHSRQFREGELVLKRILPNQHDLRGKWTPNWEGPFVVKKAFSGGALILAEMDGREFS 1034

Query: 358  N 360
            N
Sbjct: 1035 N 1035



 Score = 25.8 bits (55), Expect(2) = 3e-21
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 342  GNEFTEPINLDRLKKFY 392
            G EF+ P+N D +KK++
Sbjct: 1030 GREFSNPVNADAVKKYF 1046


>gb|EOX94716.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
           [Theobroma cacao]
          Length = 642

 Score =  102 bits (254), Expect(2) = 4e-21
 Identities = 53/121 (43%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1   LPTEIEVQSLHITK*WNPRFQNSQ*RPQN-HYQELALLDEKILNARFIDQLYKRRIVKHF 177
           LP E+E+ SL + K      Q  +    N  Y++L L++EK L A    QLY++R+++ +
Sbjct: 514 LPIEVEIPSLRVLK----EVQLEEAEWVNARYEQLNLIEEKRLTALCHGQLYQKRMMRAY 569

Query: 178 NKRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSP 357
           +K+ HS+  + G+LVLK++ PN HDLRGK+ PNWEGPF++KK FS GAL L++M+     
Sbjct: 570 DKKAHSRQFREGELVLKRILPNQHDLRGKWTPNWEGPFVVKKAFSGGALILAEMDGREFS 629

Query: 358 N 360
           N
Sbjct: 630 N 630



 Score = 25.8 bits (55), Expect(2) = 4e-21
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFY 392
           G EF+ P+N D +KK++
Sbjct: 625 GREFSNPVNADAVKKYF 641


>gb|EOY10467.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
           [Theobroma cacao]
          Length = 139

 Score =  102 bits (253), Expect(2) = 4e-21
 Identities = 53/121 (43%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1   LPTEIEVQSLHITK*WNPRFQNSQ*RPQN-HYQELALLDEKILNARFIDQLYKRRIVKHF 177
           LP E+E+ SL + K      Q  +    N  Y++L L++EK L A    QLY++R+++ +
Sbjct: 5   LPIEVEIPSLRVLK----EVQLEEAEWVNARYEQLNLIEEKRLTALCHRQLYQKRMMRAY 60

Query: 178 NKRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSP 357
           +K+ HS+  + G+LVLK++ PN HDLRGK+ PNWEGPF++KK FS GAL L++M+     
Sbjct: 61  DKKAHSRQFREGELVLKRILPNQHDLRGKWTPNWEGPFVVKKAFSGGALILAEMDGREFS 120

Query: 358 N 360
           N
Sbjct: 121 N 121



 Score = 26.2 bits (56), Expect(2) = 4e-21
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFY 392
           G EF+ P+N D +KK++
Sbjct: 116 GREFSNPVNADAIKKYF 132


>gb|EOY03806.1| RNA-directed DNA polymerase [Theobroma cacao]
          Length = 386

 Score =  100 bits (248), Expect(2) = 2e-20
 Identities = 53/121 (43%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1   LPTEIEVQSLHITK*WNPRFQNSQ*RPQN-HYQELALLDEKILNARFIDQLYKRRIVKHF 177
           LP E+E+ SL + K      Q  +    N  Y++L L++EK L A    QLY++R+++ +
Sbjct: 258 LPIEVEIPSLRVLK----EVQLEETEWVNARYEQLNLIEEKRLTALCHGQLYQKRMMRAY 313

Query: 178 NKRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSP 357
           +K+ HS+  + G+LVLK++ PN HD RGK+ PNWEGPF+IKK FS GAL L++M+     
Sbjct: 314 DKKAHSRQFREGELVLKRILPNQHDPRGKWTPNWEGPFVIKKAFSGGALILAEMDGREFS 373

Query: 358 N 360
           N
Sbjct: 374 N 374



 Score = 25.8 bits (55), Expect(2) = 2e-20
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFY 392
           G EF+ P+N D +KK++
Sbjct: 369 GREFSNPVNADAVKKYF 385


>gb|EOX94216.1| RNA-directed DNA polymerase [Theobroma cacao]
          Length = 460

 Score = 99.8 bits (247), Expect(2) = 2e-20
 Identities = 52/121 (42%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1   LPTEIEVQSLHITK*WNPRFQNSQ*RPQN-HYQELALLDEKILNARFIDQLYKRRIVKHF 177
           LP E+E+ SL + K      Q  +    N  Y++L L++EK L A    QLY++R+++ +
Sbjct: 332 LPIEVEIPSLRVLK----EVQLEEAEWVNARYEQLNLIEEKRLTALCHGQLYQKRMMRAY 387

Query: 178 NKRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSP 357
           +K+ HS+  + G+LVLK++ PN HD RGK+ PNWEGPF++KK FS GAL L++M+     
Sbjct: 388 DKKAHSRQFREGELVLKRILPNQHDPRGKWTPNWEGPFVVKKAFSGGALILAEMDGREFS 447

Query: 358 N 360
           N
Sbjct: 448 N 448



 Score = 25.8 bits (55), Expect(2) = 2e-20
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFY 392
           G EF+ P+N D +KK++
Sbjct: 443 GREFSNPVNADAVKKYF 459


>gb|EOY20481.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
           [Theobroma cacao]
          Length = 210

 Score =  100 bits (249), Expect(2) = 7e-20
 Identities = 49/120 (40%), Positives = 82/120 (68%)
 Frame = +1

Query: 1   LPTEIEVQSLHITK*WNPRFQNSQ*RPQNHYQELALLDEKILNARFIDQLYKRRIVKHFN 180
           LP E+E+ SL +      + ++++   ++ Y++L L++EK L A    Q+Y+RR+++ + 
Sbjct: 82  LPVEVEIPSLRVLM--ETKLEDAE-WVRSRYEQLNLIEEKRLTALCHGQMYQRRMMRAYE 138

Query: 181 KRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSPN 360
           K+VH +  + G+LVLK++ PN  D RGK+ PNWEGP+++KK FS GAL L+DM+  + PN
Sbjct: 139 KKVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGALILADMDGGDLPN 198



 Score = 23.5 bits (49), Expect(2) = 7e-20
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFY 392
           G +   PIN D +KK+Y
Sbjct: 193 GGDLPNPINADAVKKYY 209


>gb|EOY19960.1| RNA-directed DNA polymerase, putative [Theobroma cacao]
          Length = 2200

 Score =  102 bits (255), Expect = 9e-20
 Identities = 53/121 (43%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1    LPTEIEVQSLHITK*WNPRFQNSQ*RPQN-HYQELALLDEKILNARFIDQLYKRRIVKHF 177
            LP E+E+ SL + K      Q  +    N  Y++L L++EK L A    QLY++R+++ +
Sbjct: 1695 LPIEVEIPSLRVLK----EVQLEEAEWVNARYEQLNLIEEKRLTALCHGQLYQKRMMRAY 1750

Query: 178  NKRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSP 357
            +K+ HS+  + G+LVLK+  PN HD RGK+ PNWEGPF++KK FS+GAL L++M+ M   
Sbjct: 1751 DKKAHSRQFREGELVLKRTLPNQHDPRGKWTPNWEGPFVVKKAFSRGALILAEMDGMEFS 1810

Query: 358  N 360
            N
Sbjct: 1811 N 1811


>gb|EOY21231.1| RNA-directed DNA polymerase [Theobroma cacao]
          Length = 338

 Score = 99.0 bits (245), Expect(2) = 2e-19
 Identities = 49/120 (40%), Positives = 81/120 (67%)
 Frame = +1

Query: 1   LPTEIEVQSLHITK*WNPRFQNSQ*RPQNHYQELALLDEKILNARFIDQLYKRRIVKHFN 180
           LP E+E+ SL +        ++++   ++ Y++L L++EK L A    Q+Y+RR+++ + 
Sbjct: 210 LPVEVEIPSLRVLM--ETELEDAE-WVRSRYEQLNLIEEKRLAALCHGQMYQRRMMRAYE 266

Query: 181 KRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSPN 360
           K+VH +  + G+LVLK++ PN  D RGK+ PNWEGP+++KK FS GAL L+DM+  + PN
Sbjct: 267 KKVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGALILADMDGGDLPN 326



 Score = 23.5 bits (49), Expect(2) = 2e-19
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFY 392
           G +   PIN D +KK+Y
Sbjct: 321 GGDLPNPINADAVKKYY 337


>gb|EOY15725.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
           [Theobroma cacao]
          Length = 284

 Score = 99.0 bits (245), Expect(2) = 2e-19
 Identities = 49/120 (40%), Positives = 81/120 (67%)
 Frame = +1

Query: 1   LPTEIEVQSLHITK*WNPRFQNSQ*RPQNHYQELALLDEKILNARFIDQLYKRRIVKHFN 180
           LP E+E+ SL +      + ++++    + Y++L L++EK L A    Q+Y+RR+++ + 
Sbjct: 156 LPVEVEIPSLRVLM--ETKLEDAE-WVCSRYEQLNLIEEKRLAALCHGQMYQRRMIRAYE 212

Query: 181 KRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSPN 360
           K+VH +  + G+LVLK++ PN  D RGK+ PNWEGP+++KK FS GAL L+DM+  + PN
Sbjct: 213 KKVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGALILTDMDGGDLPN 272



 Score = 23.5 bits (49), Expect(2) = 2e-19
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFY 392
           G +   PIN D +KK+Y
Sbjct: 267 GGDLPNPINADAVKKYY 283


>gb|EOY22161.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
           [Theobroma cacao]
          Length = 136

 Score = 96.3 bits (238), Expect(2) = 3e-19
 Identities = 51/121 (42%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1   LPTEIEVQSLHITK*WNPRFQNSQ*RPQN-HYQELALLDEKILNARFIDQLYKRRIVKHF 177
           LP E+E+ SL + K      Q  +    N  Y++L L++EK L A    QLY++R+++ +
Sbjct: 8   LPIEVEIPSLRVFK----EVQLEEAEWVNARYEQLNLIEEKRLTALCHGQLYQKRMMRAY 63

Query: 178 NKRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSP 357
           +K+ HS+  + G+LVLK++ PN HD R K+ PNWEGPF++KK FS GAL L++M+     
Sbjct: 64  DKKAHSRQFREGELVLKRILPNQHDPRRKWTPNWEGPFVVKKAFSGGALILAEMDGREFS 123

Query: 358 N 360
           N
Sbjct: 124 N 124



 Score = 25.8 bits (55), Expect(2) = 3e-19
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFY 392
           G EF+ P+N D +KK++
Sbjct: 119 GREFSNPVNADAVKKYF 135


>dbj|BAJ53209.1| JHL23C09.1 [Jatropha curcas]
          Length = 525

 Score = 91.7 bits (226), Expect(2) = 7e-19
 Identities = 50/121 (41%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1   LPTEIEVQSLHITK*WNPRFQNSQ*R-PQNHYQELALLDEKILNARFIDQLYKRRIVKHF 177
           LP E+EVQS  + +      Q S+    +N++ +L  +DEK L A    Q+Y+RR+ +HF
Sbjct: 397 LPIELEVQSARVIR----ESQISEANWAENYHLQLLGMDEKRLRAIHQTQVYQRRMARHF 452

Query: 178 NKRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSP 357
           NKRV  + L+ G LVLK++   + D RGKF+P+W GP+++KKI S GA+ L+D++ +   
Sbjct: 453 NKRVKDRKLEEGCLVLKEIRQPVIDPRGKFRPHWAGPYVLKKILSGGAVILTDLDGLEFT 512

Query: 358 N 360
           N
Sbjct: 513 N 513



 Score = 28.9 bits (63), Expect(2) = 7e-19
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFYV 395
           G EFT P NLD+LK+++V
Sbjct: 508 GLEFTNPCNLDQLKRYFV 525


>gb|EOX95167.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
           [Theobroma cacao]
          Length = 210

 Score = 97.1 bits (240), Expect(2) = 7e-19
 Identities = 48/120 (40%), Positives = 81/120 (67%)
 Frame = +1

Query: 1   LPTEIEVQSLHITK*WNPRFQNSQ*RPQNHYQELALLDEKILNARFIDQLYKRRIVKHFN 180
           LP E+E+ SL +        ++++   ++ Y++L L++EK L A    Q+Y+RR+++ + 
Sbjct: 82  LPVEVEIPSLRVLM--EAELEDAE-WVRSRYEQLNLIEEKRLAALCHGQMYQRRMMRAYE 138

Query: 181 KRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSPN 360
           K+VH +  + G+LVLK++ PN  D RGK+ PNWEGP+++KK FS GAL L++M+  + PN
Sbjct: 139 KKVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGALILANMDGGDLPN 198



 Score = 23.5 bits (49), Expect(2) = 7e-19
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFY 392
           G +   PIN D +KK+Y
Sbjct: 193 GGDLPNPINADAVKKYY 209


>gb|EOY20987.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
            [Theobroma cacao]
          Length = 857

 Score = 99.8 bits (247), Expect = 8e-19
 Identities = 50/120 (41%), Positives = 82/120 (68%)
 Frame = +1

Query: 1    LPTEIEVQSLHITK*WNPRFQNSQ*RPQNHYQELALLDEKILNARFIDQLYKRRIVKHFN 180
            LP E+E+ SL +      + ++++   ++ Y++L L++EK L A    Q+Y+RR+++ + 
Sbjct: 699  LPVEVEIPSLRVLM--ETKLEDAE-WVRSCYEQLNLIEEKRLAALCHGQMYQRRMMRAYE 755

Query: 181  KRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSPN 360
            K+VH K  + G+LVLK++ PN  D RGK+ PNWEGP+++KK FS GAL L+DM+  + PN
Sbjct: 756  KKVHPKQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGALILADMDGGDLPN 815


>gb|EOY26501.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
           [Theobroma cacao]
          Length = 353

 Score = 93.6 bits (231), Expect(2) = 2e-18
 Identities = 50/121 (41%), Positives = 76/121 (62%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1   LPTEIEVQSLHITK*WNPRFQNSQ*RPQNH-YQELALLDEKILNARFIDQLYKRRIVKHF 177
           LP E+E+ SL + K      Q  +    N  Y++L L++EK L A    QLY++R+++ +
Sbjct: 225 LPIEVEIPSLRVLK----EVQLEEAEWVNACYEQLNLIEEKRLTALCHGQLYQKRMIRAY 280

Query: 178 NKRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSP 357
            K+ H +  + G+LVLK++ PN HD RGK+  NWEGPF++KK FS GAL L++M+     
Sbjct: 281 GKKAHPRQFREGELVLKRILPNQHDPRGKWTLNWEGPFVVKKAFSGGALILAEMDGREFS 340

Query: 358 N 360
           N
Sbjct: 341 N 341



 Score = 25.8 bits (55), Expect(2) = 2e-18
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFY 392
           G EF+ P+N D +KK++
Sbjct: 336 GREFSNPVNADAVKKYF 352


>gb|EOY13888.1| RNA-directed DNA polymerase [Theobroma cacao]
          Length = 308

 Score = 92.0 bits (227), Expect(2) = 2e-18
 Identities = 41/90 (45%), Positives = 66/90 (73%)
 Frame = +1

Query: 91  YQELALLDEKILNARFIDQLYKRRIVKHFNKRVHSKLLKVGDLVLKQMWPNIHDLRGKFK 270
           +++L L++EK L A    QLY++R+++ ++K+ HS+  + G+LVL+++ PN HD RGK+ 
Sbjct: 165 HEQLNLIEEKRLTALCHGQLYQKRMMRAYDKKAHSRQFREGELVLRRILPNQHDPRGKWT 224

Query: 271 PNWEGPFLIKKIFSKGALRLSDMEAMNSPN 360
           PNWEGPF++KK FS GAL L++M+     N
Sbjct: 225 PNWEGPFVVKKAFSGGALILAEMDGREFSN 254



 Score = 27.3 bits (59), Expect(2) = 2e-18
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFYV*LET 407
           G EF+ P+N D +KK++  L+T
Sbjct: 249 GREFSNPVNADAVKKYFGGLDT 270


>gb|EOY09277.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H,
            putative [Theobroma cacao]
          Length = 1560

 Score = 95.5 bits (236), Expect(2) = 2e-18
 Identities = 49/122 (40%), Positives = 82/122 (67%), Gaps = 2/122 (1%)
 Frame = +1

Query: 1    LPTEIEVQSLHITK*WNPRFQNSQ*RPQNHYQELALLDEKILNARFIDQLYKRRIVKHFN 180
            LP E+E+ SL +      + ++++   ++ Y++L L++EK L A    Q+Y+RR+++ + 
Sbjct: 1430 LPVEVEIPSLRVLM--ETKLEDAE-WVRSRYEQLNLIEEKRLAALCHGQMYQRRMIRAYE 1486

Query: 181  KRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGA--LRLSDMEAMNS 354
            K+VH +  + G+LVLK++ PN  D RGK+ PNWEGP+++KK FS GA  L L+DM+  + 
Sbjct: 1487 KKVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGALILILTDMDGGDL 1546

Query: 355  PN 360
            PN
Sbjct: 1547 PN 1548



 Score = 23.5 bits (49), Expect(2) = 2e-18
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 342  GNEFTEPINLDRLKKFY 392
            G +   PIN D +KK+Y
Sbjct: 1543 GGDLPNPINTDAVKKYY 1559


>gb|EOY28052.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
           [Theobroma cacao]
          Length = 284

 Score = 95.5 bits (236), Expect(2) = 2e-18
 Identities = 47/120 (39%), Positives = 81/120 (67%)
 Frame = +1

Query: 1   LPTEIEVQSLHITK*WNPRFQNSQ*RPQNHYQELALLDEKILNARFIDQLYKRRIVKHFN 180
           LP E+E+ SL +        ++++   ++ Y++L L++EK L A    Q+Y+RR+++ + 
Sbjct: 156 LPVEVEIPSLRVLM--ETELEDAE-WVRSRYEQLNLIEEKRLAALCHGQMYQRRMMRAYE 212

Query: 181 KRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSPN 360
           K+VH +  + G+LVLK++ PN  D +GK+ PNWEGP+++KK FS GAL L++M+  + PN
Sbjct: 213 KKVHPRQFREGELVLKRILPNQTDFQGKWMPNWEGPYVVKKAFSGGALILANMDGGDLPN 272



 Score = 23.5 bits (49), Expect(2) = 2e-18
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFY 392
           G +   PIN D +KK+Y
Sbjct: 267 GGDLPNPINTDAVKKYY 283


>gb|EOY10681.1| Uncharacterized protein TCM_025982 [Theobroma cacao]
          Length = 828

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 49/120 (40%), Positives = 81/120 (67%)
 Frame = +1

Query: 1    LPTEIEVQSLHITK*WNPRFQNSQ*RPQNHYQELALLDEKILNARFIDQLYKRRIVKHFN 180
            LP E+E+ SL +        ++++   ++ Y++L L++EK+L A    Q+Y+RR ++ + 
Sbjct: 691  LPVEVEIPSLRVLM--ETELEDAE-WVRSRYEQLNLIEEKMLAALCHGQMYQRRRMRAYE 747

Query: 181  KRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSPN 360
            K+VH K  + G+LVLK++ PN  D RGK+ PNWEGP+++KK FS GAL L++M+  + PN
Sbjct: 748  KKVHPKQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGALILANMDGGDLPN 807


>gb|EOY21879.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease
           H, putative [Theobroma cacao]
          Length = 433

 Score = 92.0 bits (227), Expect(2) = 4e-18
 Identities = 47/117 (40%), Positives = 75/117 (64%)
 Frame = +1

Query: 10  EIEVQSLHITK*WNPRFQNSQ*RPQNHYQELALLDEKILNARFIDQLYKRRIVKHFNKRV 189
           E+E+ SL + K      + ++      Y++L L++EK L A    QLY++R+++ + K+ 
Sbjct: 308 EVEIPSLRVLK--EVHLEEAE-WVNARYEQLNLIEEKRLTALCHGQLYQKRMMRAYGKKA 364

Query: 190 HSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSPN 360
           HS+  + G+LVLK++ PN HD  GK+ PNWEGPF++KK FS GAL L++M+     N
Sbjct: 365 HSRQFREGELVLKRILPNQHDPCGKWTPNWEGPFVVKKAFSGGALILTEMDGREFSN 421



 Score = 25.8 bits (55), Expect(2) = 4e-18
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFY 392
           G EF+ P+N D +KK++
Sbjct: 416 GREFSNPVNADAVKKYF 432


>gb|EOY20400.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
           [Theobroma cacao]
          Length = 210

 Score = 90.9 bits (224), Expect(2) = 1e-17
 Identities = 49/121 (40%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
 Frame = +1

Query: 1   LPTEIEVQSLHITK*WNPRFQNSQ*RPQN-HYQELALLDEKILNARFIDQLYKRRIVKHF 177
           LP E+E+ SL + K      Q  +    N HY++L L++EK L A     LY++R+++ +
Sbjct: 82  LPIEVEIPSLRVLK----EVQLEEAEWVNIHYEQLNLIEEKKLTALCHGLLYQKRMMRAY 137

Query: 178 NKRVHSKLLKVGDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRLSDMEAMNSP 357
            K+VH +  + G+LVLK++ PN  D RGK+  NWE PF++KK FS+G L L+DM+     
Sbjct: 138 GKKVHPRQFQEGELVLKRILPNQQDPRGKWMSNWERPFVVKKAFSEGTLILADMDGKEFS 197

Query: 358 N 360
           N
Sbjct: 198 N 198



 Score = 25.8 bits (55), Expect(2) = 1e-17
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 342 GNEFTEPINLDRLKKFY 392
           G EF+ P+N D +KK++
Sbjct: 193 GKEFSNPVNADAVKKYF 209