BLASTX nr result
ID: Jatropha_contig00019342
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00019342
(573 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002324006.1| predicted protein [Populus trichocarpa] gi|2... 82 3e-36
gb|ESR59807.1| hypothetical protein CICLE_v10014173mg [Citrus cl... 95 1e-35
gb|EEE84823.2| RNA recognition motif-containing family protein [... 83 1e-28
ref|XP_002300018.1| predicted protein [Populus trichocarpa] 83 1e-28
gb|EOY02483.1| Zinc finger family protein / RNA recognition moti... 72 2e-28
ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis] ... 80 2e-28
gb|EMJ18263.1| hypothetical protein PRUPE_ppa001047mg [Prunus pe... 62 6e-23
ref|XP_006338591.1| PREDICTED: zinc finger CCCH domain-containin... 67 6e-23
ref|XP_004304651.1| PREDICTED: zinc finger CCCH domain-containin... 59 4e-22
ref|XP_004232321.1| PREDICTED: zinc finger CCCH domain-containin... 64 2e-21
ref|XP_003554702.1| PREDICTED: zinc finger CCCH domain-containin... 60 3e-21
ref|XP_006341318.1| PREDICTED: zinc finger CCCH domain-containin... 64 7e-21
ref|XP_004252213.1| PREDICTED: zinc finger CCCH domain-containin... 65 4e-20
ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containin... 65 4e-19
emb|CBI34878.3| unnamed protein product [Vitis vinifera] 65 4e-19
gb|ESW22933.1| hypothetical protein PHAVU_004G007600g [Phaseolus... 64 1e-16
ref|XP_003524556.1| PREDICTED: zinc finger CCCH domain-containin... 65 3e-16
ref|XP_004489225.1| PREDICTED: zinc finger CCCH domain-containin... 56 1e-15
ref|XP_002877067.1| RNA recognition motif-containing protein [Ar... 53 1e-15
ref|XP_006290572.1| hypothetical protein CARUB_v10016662mg [Caps... 51 4e-15
>ref|XP_002324006.1| predicted protein [Populus trichocarpa] gi|222867008|gb|EEF04139.1|
hypothetical protein POPTR_0017s10830g [Populus
trichocarpa]
Length = 964
Score = 82.4 bits (202), Expect(3) = 3e-36
Identities = 48/89 (53%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +3
Query: 180 VAEATTKAFDPVAVPFPRAEMRADKNISVEYALSSP-KTNMSLAQHESAGSKQPIRPVAP 356
V AT ++ DP + P AEM DKN +VE +SS KT + +A +SAGSK I P+AP
Sbjct: 692 VKAATPRSADPGSAS-PHAEM-VDKNKTVENVVSSSSKTCVMMALQDSAGSKPSIHPLAP 749
Query: 357 TGPSFIMNRYKLDNRPTALKIIPPCTTGL 443
GP F+MN+YKLDNRPTA KII P GL
Sbjct: 750 VGPPFLMNKYKLDNRPTAFKIISPLPAGL 778
Score = 65.1 bits (157), Expect(3) = 3e-36
Identities = 37/58 (63%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 KLE-LERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKKHRVRI 169
KLE LE+L+E+LRKK+ LLDQKR+D R+LDKLE ATGVKG++ AEPA+K+H+ I
Sbjct: 630 KLESLEQLKEELRKKQELLDQKRNDF-RRQLDKLEKQATGVKGEVTAEPASKRHKTGI 686
Score = 50.8 bits (120), Expect(3) = 3e-36
Identities = 29/42 (69%), Positives = 31/42 (73%)
Frame = +1
Query: 427 PVQLVLANVDTLKEYFSSCGDLSTVELEDVEASNGDGYASET 552
P+ LANV TLKEYFSS GDLS VELED E S+ DG SET
Sbjct: 773 PLPAGLANVATLKEYFSSYGDLSAVELED-EPSDYDGVGSET 813
>gb|ESR59807.1| hypothetical protein CICLE_v10014173mg [Citrus clementina]
Length = 946
Score = 95.1 bits (235), Expect(3) = 1e-35
Identities = 52/91 (57%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Frame = +3
Query: 174 ADVAEATTKAFDPVA-VPFPRAEMRADKNISVEYALS-SPKTNMSLAQHESAGSKQPIRP 347
ADVA+AT ++ D A V P AEM ADKN V+ LS S K N ++ ES KQ IRP
Sbjct: 698 ADVAKATARSSDSTAAVASPHAEMMADKNKLVDIVLSPSQKVNTAMVLQESTSFKQQIRP 757
Query: 348 VAPTGPSFIMNRYKLDNRPTALKIIPPCTTG 440
+AP GP F+MNRYKLDNRPTA +IIPP G
Sbjct: 758 LAPAGPPFLMNRYKLDNRPTAFRIIPPLPVG 788
Score = 59.3 bits (142), Expect(3) = 1e-35
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = +2
Query: 11 LERLQEDLRKKRALLDQKRDDVPSRELDKLENATGVKGDLVAEPAAKKHRVRIAS 175
LE+L+E+LRKK+ LLDQKR+D R+LDKLE G K D+V+E AAK+ +V IA+
Sbjct: 645 LEQLKEELRKKQELLDQKRNDF-RRQLDKLEKQAGGKSDVVSEKAAKRLKVGIAA 698
Score = 42.0 bits (97), Expect(3) = 1e-35
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = +1
Query: 415 RLSLPVQLVLANVDTLKEYFSSCGDLSTVELEDVEASNGD 534
R+ P+ + A+V LKE+FSS GDL++VELED E GD
Sbjct: 780 RIIPPLPVGFADVAVLKEHFSSYGDLASVELEDGEVHEGD 819
>gb|EEE84823.2| RNA recognition motif-containing family protein [Populus
trichocarpa]
Length = 981
Score = 83.2 bits (204), Expect(3) = 1e-28
Identities = 51/93 (54%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Frame = +3
Query: 174 ADVAEA-TTKAFDPVA-VPFPRAEMRADKNISVEYALSSP-KTNMSLAQHESAGSKQPIR 344
+DVA+A TT++ DP A V P + DKN +E +SS KT+ +A ESAGSKQ I
Sbjct: 689 SDVAKAATTRSADPGAGVASPHGGI-VDKNKRMENIVSSSTKTSTVMALQESAGSKQSIH 747
Query: 345 PVAPTGPSFIMNRYKLDNRPTALKIIPPCTTGL 443
P+AP GP F+MN+YKLDNRPTA KII P GL
Sbjct: 748 PLAPVGPPFLMNKYKLDNRPTAFKIISPLPAGL 780
Score = 60.8 bits (146), Expect(3) = 1e-28
Identities = 36/60 (60%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
Frame = +2
Query: 2 KLE-LERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKKHRVRIAS 175
KLE LE+L+E+LRKK+ LLDQKR+D R+L KLE ATGVKG++ EPA+K+ + IAS
Sbjct: 631 KLENLEQLKEELRKKQELLDQKRNDF-RRQLHKLEKQATGVKGEVATEPASKRQKTGIAS 689
Score = 28.5 bits (62), Expect(3) = 1e-28
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
Frame = +1
Query: 463 KEYFSSCGDLSTVELEDVEA-----SNGDG 537
+E+FSS G LS+VELED NGDG
Sbjct: 797 REHFSSYGYLSSVELEDEPGDYDGDGNGDG 826
>ref|XP_002300018.1| predicted protein [Populus trichocarpa]
Length = 981
Score = 83.2 bits (204), Expect(3) = 1e-28
Identities = 51/93 (54%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Frame = +3
Query: 174 ADVAEA-TTKAFDPVA-VPFPRAEMRADKNISVEYALSSP-KTNMSLAQHESAGSKQPIR 344
+DVA+A TT++ DP A V P + DKN +E +SS KT+ +A ESAGSKQ I
Sbjct: 689 SDVAKAATTRSADPGAGVASPHGGI-VDKNKRMENIVSSSTKTSTVMALQESAGSKQSIH 747
Query: 345 PVAPTGPSFIMNRYKLDNRPTALKIIPPCTTGL 443
P+AP GP F+MN+YKLDNRPTA KII P GL
Sbjct: 748 PLAPVGPPFLMNKYKLDNRPTAFKIISPLPAGL 780
Score = 60.8 bits (146), Expect(3) = 1e-28
Identities = 36/60 (60%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
Frame = +2
Query: 2 KLE-LERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKKHRVRIAS 175
KLE LE+L+E+LRKK+ LLDQKR+D R+L KLE ATGVKG++ EPA+K+ + IAS
Sbjct: 631 KLENLEQLKEELRKKQELLDQKRNDF-RRQLHKLEKQATGVKGEVATEPASKRQKTGIAS 689
Score = 28.5 bits (62), Expect(3) = 1e-28
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
Frame = +1
Query: 463 KEYFSSCGDLSTVELEDVEA-----SNGDG 537
+E+FSS G LS+VELED NGDG
Sbjct: 797 REHFSSYGYLSSVELEDEPGDYDGDGNGDG 826
>gb|EOY02483.1| Zinc finger family protein / RNA recognition motif-containing
protein, putative [Theobroma cacao]
Length = 941
Score = 72.4 bits (176), Expect(3) = 2e-28
Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Frame = +3
Query: 174 ADVAEATTK-AFDPVA-VPFPRAEMRADKNISVEYALS-SPKTNMSLAQHESAGSKQPIR 344
AD A+A+T + +P A P +KN S E +S SPK+N ++A ES SKQ R
Sbjct: 693 ADPAKASTPMSSEPGASAATPCTIGMTEKNKSTENVVSHSPKSNTTMALQESMSSKQQSR 752
Query: 345 PVAPTGPSFIMNRYKLDNRPTALKIIPPCTTG 440
P AP G F+MNRYKLDNRP A ++IPP +G
Sbjct: 753 PSAPAGHPFLMNRYKLDNRPPAFRVIPPLPSG 784
Score = 58.5 bits (140), Expect(3) = 2e-28
Identities = 31/56 (55%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Frame = +2
Query: 11 LERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKKHRVRIAS 175
LE+++E+LRKK+ +L+QKR+D R+LDKLE ++GVKGDL+ E AAK+ +V IA+
Sbjct: 639 LEQMKEELRKKQEMLEQKRNDF-RRQLDKLEKQSSGVKGDLMTEQAAKRQKVGIAA 693
Score = 41.2 bits (95), Expect(3) = 2e-28
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +1
Query: 415 RLSLPVQLVLANVDTLKEYFSSCGDLSTVELEDVEASNGDGYASE 549
R+ P+ A+VD LKE+F GDL VELE+VE ++GDG SE
Sbjct: 776 RVIPPLPSGFADVDALKEHFLQYGDLFAVELEEVE-NDGDGLGSE 819
>ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis]
gi|223536016|gb|EEF37674.1| rrm/rnp domain, putative
[Ricinus communis]
Length = 972
Score = 80.5 bits (197), Expect(2) = 2e-28
Identities = 41/77 (53%), Positives = 50/77 (64%)
Frame = +3
Query: 213 VAVPFPRAEMRADKNISVEYALSSPKTNMSLAQHESAGSKQPIRPVAPTGPSFIMNRYKL 392
+ VP PR E ++ +N SSPK N SL Q E+ GS+QPIRPV P G F +NR+KL
Sbjct: 714 LGVPSPRGENKSFENPMS----SSPKNNASLMQQETTGSRQPIRPVGPAGAPFSVNRFKL 769
Query: 393 DNRPTALKIIPPCTTGL 443
DNRPT +IIPP GL
Sbjct: 770 DNRPTTFRIIPPLPPGL 786
Score = 71.2 bits (173), Expect(2) = 2e-28
Identities = 39/59 (66%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 KLELERLQEDLRKKRALLDQKRDDVPSRELDKLEN-ATGVKGDLVAEPAAKKHRVRIAS 175
KLELE+L+E+LRKK+ LL QKR+D R+LDKLE ATGVKG++V EPAAK+HRV +A+
Sbjct: 642 KLELEQLKEELRKKQELLAQKRNDF-RRQLDKLEKQATGVKGEVVVEPAAKRHRVGMAT 699
>gb|EMJ18263.1| hypothetical protein PRUPE_ppa001047mg [Prunus persica]
Length = 924
Score = 62.4 bits (150), Expect(3) = 6e-23
Identities = 41/92 (44%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Frame = +3
Query: 174 ADVAE-ATTKAFDPVAVPFPRAEMRADKNISVEYALS-SPKTNMSLAQHESAGSKQ-PIR 344
ADV + A K+ +P + AEM DKN VE +S SPKT+ ++ +S KQ IR
Sbjct: 673 ADVGKVANPKSSNPTPMEELHAEM-TDKNKCVENVVSCSPKTSTTMVLQQSTSLKQLSIR 731
Query: 345 PVAPTGPSFIMNRYKLDNRPTALKIIPPCTTG 440
P+ G +NRYKLDNRPTA +I+PP G
Sbjct: 732 PLGSIGTPSPVNRYKLDNRPTAFRILPPLPAG 763
Score = 53.9 bits (128), Expect(3) = 6e-23
Identities = 34/60 (56%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = +2
Query: 2 KLE-LERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKKHRVRIAS 175
KLE LE+L+E+LRKK+ +LDQKR+D R+LDKLE ATG KG+ E AAK+ +V I +
Sbjct: 615 KLENLEQLKEELRKKQEMLDQKRNDF-RRKLDKLEKQATGPKGEADIEQAAKRPKVGITA 673
Score = 37.0 bits (84), Expect(3) = 6e-23
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 415 RLSLPVQLVLANVDTLKEYFSSCGDLSTVELEDVEA 522
R+ P+ ANV +KE+FS GDLS ELED+E+
Sbjct: 755 RILPPLPAGFANVAIMKEHFSPYGDLSNAELEDLES 790
>ref|XP_006338591.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Solanum tuberosum]
Length = 860
Score = 67.0 bits (162), Expect(3) = 6e-23
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +3
Query: 186 EATTKAFDPVAVPFPRAEMRADKNISVEYALSSPKTNMSL-AQHESAGSKQPIRPVAPTG 362
E+++ A AV P A+ + + E A S + SL A E++ KQ IRP+AP G
Sbjct: 646 ESSSPAEPSNAVSSPHAKATPFSSRTTENAEPSCSKSSSLVAAKEASNLKQSIRPLAPVG 705
Query: 363 PSFIMNRYKLDNRPTALKIIPPCTTGL 443
FI+NRYKLDNRPT KI+PP +GL
Sbjct: 706 APFILNRYKLDNRPTTFKILPPLPSGL 732
Score = 44.7 bits (104), Expect(3) = 6e-23
Identities = 25/49 (51%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = +2
Query: 11 LERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKK 154
LE L+E++RKK+ +L+QKR+D R+LDKLE A GVK + V + + KK
Sbjct: 585 LELLKEEMRKKQEMLEQKRNDF-RRKLDKLEKQAVGVKDEAVPDQSVKK 632
Score = 41.6 bits (96), Expect(3) = 6e-23
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 427 PVQLVLANVDTLKEYFSSCGDLSTVELEDVE 519
P+ LANVD LKE+FS+ GDL +VELED+E
Sbjct: 727 PLPSGLANVDVLKEHFSTFGDLLSVELEDLE 757
>ref|XP_004304651.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Fragaria vesca subsp. vesca]
Length = 929
Score = 58.5 bits (140), Expect(3) = 4e-22
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +3
Query: 180 VAEATTKAFDPVAVPFPRAEMRADKNISVEYALS-SPKTNMSLAQHESAGSK-QPIRPVA 353
VA ++ + P V EM DKN S + +S SPK + ++ +S K Q IRP
Sbjct: 685 VATPSSSSPTPTPVSALADEMLTDKNQSGDTVVSHSPKASTAMTLQQSPTLKHQMIRPSV 744
Query: 354 PTGPSFIMNRYKLDNRPTALKIIPPCTTG 440
P G +NRYKLDNRPT +I+PP +G
Sbjct: 745 PLGTPVPLNRYKLDNRPTGFRILPPLPSG 773
Score = 52.0 bits (123), Expect(3) = 4e-22
Identities = 31/59 (52%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Frame = +2
Query: 2 KLE-LERLQEDLRKKRALLDQKRDDVPSRELDKLENATGVKGDLVAEPAAKKHRVRIAS 175
KLE LE+L+E+LRKK+ +LDQKR+D R+L KLE G KG+ E AAK+ +V +A+
Sbjct: 623 KLENLEQLKEELRKKQEMLDQKRNDF-RRQLYKLEKQGGPKGEADTELAAKRRKVGLAA 680
Score = 40.0 bits (92), Expect(3) = 4e-22
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 415 RLSLPVQLVLANVDTLKEYFSSCGDLSTVELEDVEA 522
R+ P+ ANV +KE+F CGD+S VELED+E+
Sbjct: 765 RILPPLPSGFANVTVIKEHFVPCGDISNVELEDLES 800
>ref|XP_004232321.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Solanum lycopersicum]
Length = 863
Score = 64.3 bits (155), Expect(3) = 2e-21
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +3
Query: 186 EATTKAFDPVAVPFPRAEMRADKNISVEYALSSPKTNMSLAQHESAGS-KQPIRPVAPTG 362
E+++ A AV P + + + E A S + SL + A + KQ IRP+AP G
Sbjct: 649 ESSSPAEPSNAVSSPHVKATPFSSRTTENAEPSCSKSSSLVTAQEASNLKQSIRPLAPVG 708
Query: 363 PSFIMNRYKLDNRPTALKIIPPCTTGL 443
FI+NRYKLDNRPT KI+PP +GL
Sbjct: 709 APFILNRYKLDNRPTTFKILPPLPSGL 735
Score = 44.7 bits (104), Expect(3) = 2e-21
Identities = 25/49 (51%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = +2
Query: 11 LERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKK 154
LE L+E++RKK+ +L+QKR+D R+LDKLE A GVK + V + + KK
Sbjct: 588 LELLKEEMRKKQEMLEQKRNDF-RRKLDKLEKQAVGVKDEAVPDQSVKK 635
Score = 39.3 bits (90), Expect(3) = 2e-21
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +1
Query: 427 PVQLVLANVDTLKEYFSSCGDLSTVELEDVE 519
P+ LA VD LKE+FS+ GDL +VELED+E
Sbjct: 730 PLPSGLATVDVLKEHFSTFGDLLSVELEDLE 760
>ref|XP_003554702.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Glycine max]
Length = 945
Score = 60.1 bits (144), Expect(3) = 3e-21
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Frame = +3
Query: 174 ADVAE-ATTKAFDP-VAVPFPRAEMRADKNISVEYALS-SPKTNMSLAQHESAGSKQPIR 344
+DVA+ A+ ++ D V + P E ADKN + +S SPK + + ES G K PI+
Sbjct: 683 SDVAKLASPQSSDADVGMASPHTEAAADKNKQLVNPVSRSPKASTATRLQESTGLKHPIQ 742
Query: 345 PVAPTGPSFIMNRYKLDNRPTALKIIPPCTTGL 443
P+ P +NRYKLDNRP A IIPP +GL
Sbjct: 743 PLMP------VNRYKLDNRPAAFCIIPPLPSGL 769
Score = 48.5 bits (114), Expect(3) = 3e-21
Identities = 26/58 (44%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = +2
Query: 5 LELERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKKHRVRIAS 175
+ LE L+E+LRKK+ +LDQKR++ R+L+K E A+G+KG++ E AAK+ ++ + S
Sbjct: 627 VNLENLKEELRKKQEMLDQKRNEF-KRQLNKFEKQASGLKGEVSTEQAAKRLKMCVPS 683
Score = 38.9 bits (89), Expect(3) = 3e-21
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1
Query: 427 PVQLVLANVDTLKEYFSSCGDLSTVELEDVEASN 528
P+ LANV LKE+FS G+LS VELEDV+ ++
Sbjct: 764 PLPSGLANVAVLKEHFSPYGELSAVELEDVQVND 797
>ref|XP_006341318.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Solanum tuberosum]
Length = 924
Score = 63.9 bits (154), Expect(3) = 7e-21
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +3
Query: 231 RAEMRADKNISVEYALSS-PKTNMSLAQHESAGSKQPIRPVAPTGPSFIMNRYKLDNRPT 407
+AE +D + S E A S P + + A E + +Q I PVAP G +FI NRYKLDNRPT
Sbjct: 693 QAEAVSDNSRSTENAEHSCPISCSAAATQEPSSLRQSIPPVAPHGAAFIFNRYKLDNRPT 752
Query: 408 ALKIIPPCTTGL 443
A K++PP +GL
Sbjct: 753 AFKVLPPMPSGL 764
Score = 43.5 bits (101), Expect(3) = 7e-21
Identities = 25/51 (49%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Frame = +2
Query: 11 LERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKKHR 160
LE L+E+LRKK+ LLDQKR++ R+L+KLE A GVK + V++ +K +
Sbjct: 619 LELLKEELRKKQELLDQKRNEF-RRQLNKLEKQAVGVKAEAVSDQDLEKQK 668
Score = 38.9 bits (89), Expect(3) = 7e-21
Identities = 22/48 (45%), Positives = 30/48 (62%)
Frame = +1
Query: 427 PVQLVLANVDTLKEYFSSCGDLSTVELEDVEASNGDGYASETQYIALS 570
P+ LANV LKE+FS+ GD VE+ED+E +G+ SE I+ S
Sbjct: 759 PMPSGLANVTVLKEHFSTFGDPPAVEMEDLEPQDGNN-GSEMSNISAS 805
>ref|XP_004252213.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Solanum lycopersicum]
Length = 877
Score = 65.5 bits (158), Expect(3) = 4e-20
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +3
Query: 231 RAEMRADKNISVEYALSS-PKTNMSLAQHESAGSKQPIRPVAPTGPSFIMNRYKLDNRPT 407
+AE+ +D N S E A S P + + A E + +Q I PVAP G F+ NRYKLDNRPT
Sbjct: 695 QAEVVSDNNRSTENAEHSCPISCSAAATQEPSSLRQSIPPVAPHGAPFVFNRYKLDNRPT 754
Query: 408 ALKIIPPCTTGL 443
A K++PP +GL
Sbjct: 755 AFKVLPPMPSGL 766
Score = 40.0 bits (92), Expect(3) = 4e-20
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 11 LERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKKHR 160
LE L+ +LRKK+ LLDQKR + R+L+KLE A GVK + +++ +K +
Sbjct: 621 LELLKVELRKKQELLDQKRSEF-RRQLNKLEKQAVGVKAEAISDQDLEKQK 670
Score = 38.1 bits (87), Expect(3) = 4e-20
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 427 PVQLVLANVDTLKEYFSSCGDLSTVELEDVEASNGD 534
P+ LANV LKE+FS+ GD VE+ED+E +G+
Sbjct: 761 PMPSGLANVTVLKEHFSTFGDPPAVEMEDLEPQDGN 796
>ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Vitis vinifera]
Length = 948
Score = 64.7 bits (156), Expect(2) = 4e-19
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = +3
Query: 189 ATTKAFDP-VAVPFPRAEMRADKNISVEYALS-SPKTNMSLAQHESAGSKQPIRPVAPTG 362
AT + DP +AV P+ E+ DKN S E + S KTN ++ E KQ +RP+A G
Sbjct: 706 ATPRCTDPGIAVGSPQTEITMDKNKSAENVVPYSSKTNSAMVLLEPTVLKQSVRPLALGG 765
Query: 363 PSFIMNRYKLDNRPTALKIIPPCTTGL 443
MNRYKLDNRP +I+ P TGL
Sbjct: 766 TPSQMNRYKLDNRPMGFRIMAPLPTGL 792
Score = 55.8 bits (133), Expect(2) = 4e-19
Identities = 34/58 (58%), Positives = 46/58 (79%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 KLE-LERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKKHRVRI 169
KLE LE ++E+LRKK+ +LDQKR+D R+LDKLE ATG+KG++ AE AAK+ +V I
Sbjct: 642 KLESLELMKEELRKKQEMLDQKRNDF-RRQLDKLEKQATGLKGEVGAEQAAKRPKVGI 698
>emb|CBI34878.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 64.7 bits (156), Expect(2) = 4e-19
Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = +3
Query: 189 ATTKAFDP-VAVPFPRAEMRADKNISVEYALS-SPKTNMSLAQHESAGSKQPIRPVAPTG 362
AT + DP +AV P+ E+ DKN S E + S KTN ++ E KQ +RP+A G
Sbjct: 518 ATPRCTDPGIAVGSPQTEITMDKNKSAENVVPYSSKTNSAMVLLEPTVLKQSVRPLALGG 577
Query: 363 PSFIMNRYKLDNRPTALKIIPPCTTGL 443
MNRYKLDNRP +I+ P TGL
Sbjct: 578 TPSQMNRYKLDNRPMGFRIMAPLPTGL 604
Score = 55.8 bits (133), Expect(2) = 4e-19
Identities = 34/58 (58%), Positives = 46/58 (79%), Gaps = 2/58 (3%)
Frame = +2
Query: 2 KLE-LERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKKHRVRI 169
KLE LE ++E+LRKK+ +LDQKR+D R+LDKLE ATG+KG++ AE AAK+ +V I
Sbjct: 454 KLESLELMKEELRKKQEMLDQKRNDF-RRQLDKLEKQATGLKGEVGAEQAAKRPKVGI 510
>gb|ESW22933.1| hypothetical protein PHAVU_004G007600g [Phaseolus vulgaris]
Length = 922
Score = 63.9 bits (154), Expect(2) = 1e-16
Identities = 36/78 (46%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +3
Query: 213 VAVPFPRAEMRADKNISVEYALS-SPKTNMSLAQHESAGSKQPIRPVAPTGPSFIMNRYK 389
V + P AE ADKN + +S SPKT+ + E G K PI+P+ P +NRYK
Sbjct: 700 VGITSPNAEAAADKNKQLVNTVSQSPKTSTAARLQEPTGLKHPIQPLMP------VNRYK 753
Query: 390 LDNRPTALKIIPPCTTGL 443
LDNRP A +IIPP GL
Sbjct: 754 LDNRPAAFRIIPPVPAGL 771
Score = 48.1 bits (113), Expect(2) = 1e-16
Identities = 27/58 (46%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Frame = +2
Query: 5 LELERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKKHRVRIAS 175
+ LE L+E+LRKK+ +LDQKR++ R+L+K E A+G+KG+L E A K+ ++ AS
Sbjct: 628 VNLENLKEELRKKQEMLDQKRNEF-KRQLNKFEKQASGLKGELSNEQATKRLKLGTAS 684
>ref|XP_003524556.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Glycine max]
Length = 922
Score = 65.5 bits (158), Expect(2) = 3e-16
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Frame = +3
Query: 174 ADVAE-ATTKAFDP-VAVPFPRAEMRADKNISVEYALS-SPKTNMSLAQHESAGSKQPIR 344
+DVA+ A+ ++ D V + P E ADKN + Y +S SPK++ + ES G K PI+
Sbjct: 683 SDVAKLASPQSSDADVGMTSPHTEATADKNKQLVYPVSQSPKSSTATRLQESTGLKHPIQ 742
Query: 345 PVAPTGPSFIMNRYKLDNRPTALKIIPPCTTGL 443
P+ P +NRYKLDNRP A +IIPP GL
Sbjct: 743 PLMP------VNRYKLDNRPAAFRIIPPLPAGL 769
Score = 45.4 bits (106), Expect(2) = 3e-16
Identities = 24/51 (47%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = +2
Query: 5 LELERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKK 154
+ LE L+E+LRKK+ +LDQKR++ R+L+K E A+G+KG++ E A K+
Sbjct: 627 VNLESLKEELRKKQEMLDQKRNEF-KRQLNKFEKQASGLKGEVSTEQATKR 676
>ref|XP_004489225.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
[Cicer arietinum]
Length = 918
Score = 56.2 bits (134), Expect(2) = 1e-15
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Frame = +3
Query: 174 ADVAE-ATTKAFDP-VAVPFPRAEMRADKNISVEYALS-SPKTNMSLAQHESAGSKQPIR 344
+DVA+ A+ ++ D + + P AE DKN + A+S SPK + L E G KQ I+
Sbjct: 681 SDVAKLASPQSSDADIGMSSPHAESTVDKNKQLVNAVSQSPKPSTRL--QEPTGLKQSIQ 738
Query: 345 PVAPTGPSFIMNRYKLDNRPTALKIIPPCTTGL 443
P+ +NRYKLDNRPTA +IIPP GL
Sbjct: 739 PLVS------VNRYKLDNRPTAFRIIPPLPVGL 765
Score = 52.8 bits (125), Expect(2) = 1e-15
Identities = 29/56 (51%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +2
Query: 11 LERLQEDLRKKRALLDQKRDDVPSRELDKLE-NATGVKGDLVAEPAAKKHRVRIAS 175
LE L+E+LRKK+ +LDQKR++ R+L+KLE ATG+KG++ E AAK+ + +AS
Sbjct: 627 LEYLKEELRKKQEMLDQKRNEF-RRQLNKLEKQATGLKGEVATEQAAKRPKTSMAS 681
>ref|XP_002877067.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297322905|gb|EFH53326.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 934
Score = 52.8 bits (125), Expect(3) = 1e-15
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +3
Query: 216 AVPFPRAEMRADKNISVEYALSSPKTNMSLAQHESAGSKQPIRPVAPTGPSFIMNRYKLD 395
A+ P+ E DK + ++ LSS K + +S KQ + + ++NRYKLD
Sbjct: 680 AIASPKPESSTDKKVPIQKPLSSGKLSTETPSPDSKNLKQRPYTFTTSLNTPMVNRYKLD 739
Query: 396 NRPTALKIIPPCTTGL 443
NR T +K++PP TGL
Sbjct: 740 NRTTTIKVVPPLPTGL 755
Score = 40.4 bits (93), Expect(3) = 1e-15
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +1
Query: 427 PVQLVLANVDTLKEYFSSCGDLSTVELEDVEASNGDGYASETQ 555
P+ LA+V LKE+FSS G++S VELED AS G G ETQ
Sbjct: 750 PLPTGLADVAVLKEHFSSYGEVSKVELED-NASIGSGKDHETQ 791
Score = 35.0 bits (79), Expect(3) = 1e-15
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 27/82 (32%)
Frame = +2
Query: 11 LERLQEDLRKKRALLDQKRDDVPSR---------------------------ELDKLENA 109
LERL+E LRKK+ +L+QKR++ + + K +
Sbjct: 594 LERLKETLRKKQEMLEQKRNEYRKKLATLEKQSLESLAEVEVKGLNLESVFWKFKKCKMG 653
Query: 110 TGVKGDLVAEPAAKKHRVRIAS 175
T VKG+ V EP AK+ +V AS
Sbjct: 654 TVVKGEEVDEPDAKRVKVDTAS 675
>ref|XP_006290572.1| hypothetical protein CARUB_v10016662mg [Capsella rubella]
gi|482559279|gb|EOA23470.1| hypothetical protein
CARUB_v10016662mg [Capsella rubella]
Length = 912
Score = 51.2 bits (121), Expect(3) = 4e-15
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +3
Query: 216 AVPFPRAEMRADKNISVEYALSSPKTNMSLAQHESAGSKQPIRPVAPTGPSFIMNRYKLD 395
A+ P+ E DK + ++ LS+ K + + +S KQ + + + NRYKLD
Sbjct: 652 AIASPKTESSTDKRVPIQKPLSTCKLSTESSSPDSKNLKQRPYSFTTSLNAPMANRYKLD 711
Query: 396 NRPTALKIIPPCTTGL 443
NR T +K++PP TGL
Sbjct: 712 NRTTTIKVVPPLPTGL 727
Score = 40.0 bits (92), Expect(3) = 4e-15
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +2
Query: 11 LERLQEDLRKKRALLDQKRDDVPSRELDKLENATGVKGDLVAEPAAKKHRVRIAS 175
LE+L+E LR K+ +LDQKR++ + + T VKG+ EP AK+ +V AS
Sbjct: 593 LEQLKETLRIKQEMLDQKRNEYRKKLATFEKQGTVVKGEEADEPDAKRVKVDTAS 647
Score = 35.4 bits (80), Expect(3) = 4e-15
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +1
Query: 427 PVQLVLANVDTLKEYFSSCGDLSTVELEDVEASNGDGYASET 552
P+ LA+V LKE+FSS G++S VELED AS G ET
Sbjct: 722 PLPTGLADVAVLKEHFSSYGEVSKVELED-NASIDKGKDHET 762