BLASTX nr result
ID: Jatropha_contig00019273
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00019273
(643 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP43919.1| integrase [Gossypium hirsutum] 47 1e-06
ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756... 51 1e-06
ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761... 51 1e-06
gb|ADB27476.1| gag-pol polyprotein [Bouteloua hirsuta subsp. pec... 49 4e-06
gb|AAP43914.1| integrase [Gossypium raimondii] 47 5e-06
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 47 7e-06
emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera] 48 7e-06
gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex] 47 8e-06
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 47 1e-05
>gb|AAP43919.1| integrase [Gossypium hirsutum]
Length = 334
Score = 47.4 bits (111), Expect(2) = 1e-06
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1
Query: 133 IIDRFSKMAHFILCHKTDDANNVAEFSLKK 44
++DRFSKM+HFI CHKTDDA +VA+ K+
Sbjct: 258 VVDRFSKMSHFIPCHKTDDATHVADLFFKE 287
Score = 31.6 bits (70), Expect(2) = 1e-06
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 59 IFFKEVVRLHGVPK 18
+FFKEVVRLHG+PK
Sbjct: 283 LFFKEVVRLHGIPK 296
>ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756049, partial [Setaria
italica]
Length = 763
Score = 50.8 bits (120), Expect(2) = 1e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = -1
Query: 133 IIDRFSKMAHFILCHKTDDANNVAEFSLKK 44
++DRFSKMAHFI CHKTDDA+NVAE ++
Sbjct: 576 VVDRFSKMAHFIPCHKTDDASNVAELFFRE 605
Score = 27.7 bits (60), Expect(2) = 1e-06
Identities = 8/13 (61%), Positives = 13/13 (100%)
Frame = -3
Query: 59 IFFKEVVRLHGVP 21
+FF+E++RLHG+P
Sbjct: 601 LFFREIIRLHGIP 613
>ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761720, partial [Setaria
italica]
Length = 738
Score = 50.8 bits (120), Expect(2) = 1e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = -1
Query: 133 IIDRFSKMAHFILCHKTDDANNVAEFSLKK 44
++DRFSKMAHFI CHKTDDA+NVAE ++
Sbjct: 551 VVDRFSKMAHFIPCHKTDDASNVAELFFRE 580
Score = 27.7 bits (60), Expect(2) = 1e-06
Identities = 8/13 (61%), Positives = 13/13 (100%)
Frame = -3
Query: 59 IFFKEVVRLHGVP 21
+FF+E++RLHG+P
Sbjct: 576 LFFREIIRLHGIP 588
>gb|ADB27476.1| gag-pol polyprotein [Bouteloua hirsuta subsp. pectinata]
Length = 227
Score = 49.3 bits (116), Expect(2) = 4e-06
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = -1
Query: 133 IIDRFSKMAHFILCHKTDDANNVAEFSLKK 44
++DRFSK+AHFI CHKTDDA+NVAE ++
Sbjct: 104 VVDRFSKIAHFIPCHKTDDASNVAELFFRE 133
Score = 27.7 bits (60), Expect(2) = 4e-06
Identities = 8/13 (61%), Positives = 13/13 (100%)
Frame = -3
Query: 59 IFFKEVVRLHGVP 21
+FF+E++RLHG+P
Sbjct: 129 LFFREIIRLHGIP 141
>gb|AAP43914.1| integrase [Gossypium raimondii]
Length = 340
Score = 47.4 bits (111), Expect(2) = 5e-06
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -1
Query: 133 IIDRFSKMAHFILCHKTDDANNVAEFSLKK 44
++DRFSKMAHFI CHKTDDA +VA+ ++
Sbjct: 258 VVDRFSKMAHFIPCHKTDDATHVADLFFRE 287
Score = 29.3 bits (64), Expect(2) = 5e-06
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -3
Query: 59 IFFKEVVRLHGVPK 18
+FF+EVVRLHG+P+
Sbjct: 283 LFFREVVRLHGIPR 296
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 47.4 bits (111), Expect(2) = 7e-06
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = -1
Query: 133 IIDRFSKMAHFILCHKTDDANNVAEFSLKK 44
++DRFSKMAHFI CHKTDDA+++A+ ++
Sbjct: 1288 VVDRFSKMAHFIPCHKTDDASHIADLFFRE 1317
Score = 28.5 bits (62), Expect(2) = 7e-06
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -3
Query: 59 IFFKEVVRLHGVP 21
+FF+E+VRLHGVP
Sbjct: 1313 LFFREIVRLHGVP 1325
>emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera]
Length = 1115
Score = 48.1 bits (113), Expect(2) = 7e-06
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -1
Query: 133 IIDRFSKMAHFILCHKTDDANNVAEFSLKK 44
++DRFSKMAHFI CHKTDDA ++A +K
Sbjct: 916 VVDRFSKMAHFISCHKTDDATHIANLFFRK 945
Score = 27.7 bits (60), Expect(2) = 7e-06
Identities = 9/14 (64%), Positives = 14/14 (100%)
Frame = -3
Query: 59 IFFKEVVRLHGVPK 18
+FF+++VRLHGVP+
Sbjct: 941 LFFRKIVRLHGVPR 954
>gb|ABC50100.1| gag-pol polyprotein [Bambusa multiplex]
Length = 227
Score = 47.4 bits (111), Expect(2) = 8e-06
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = -1
Query: 133 IIDRFSKMAHFILCHKTDDANNVAEFSLKK 44
++DRFSKMAHFI CHK+DDA N+A+ ++
Sbjct: 104 VVDRFSKMAHFIPCHKSDDATNIADLFFRE 133
Score = 28.5 bits (62), Expect(2) = 8e-06
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -3
Query: 59 IFFKEVVRLHGVP 21
+FF+EV+RLHGVP
Sbjct: 129 LFFREVIRLHGVP 141
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 47.0 bits (110), Expect(2) = 1e-05
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = -1
Query: 133 IIDRFSKMAHFILCHKTDDANNVAEFSLKK 44
++DRFSKMAHFI CHKTDDA ++A+ ++
Sbjct: 1291 VVDRFSKMAHFIPCHKTDDATHIADLFFRE 1320
Score = 28.5 bits (62), Expect(2) = 1e-05
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -3
Query: 59 IFFKEVVRLHGVP 21
+FF+E+VRLHGVP
Sbjct: 1316 LFFREIVRLHGVP 1328