BLASTX nr result
ID: Jatropha_contig00019056
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00019056
(637 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 187 2e-45
gb|ERM95251.1| hypothetical protein AMTR_s02071p00004290 [Ambore... 177 2e-42
ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura ... 171 1e-40
gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo bilob... 166 5e-39
ref|XP_004514805.1| PREDICTED: NAD(P)H-quinone oxidoreductase su... 163 3e-38
sp|A4GYN8.1|RR12B_POPTR RecName: Full=30S ribosomal protein S12-... 161 2e-37
gb|ESW29186.1| hypothetical protein PHAVU_002G050200g, partial [... 160 3e-37
gb|EPS74518.1| hypothetical protein M569_00235, partial [Genlise... 160 3e-37
ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygro... 160 3e-37
ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [... 160 3e-37
ref|XP_003632904.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 155 1e-35
ref|XP_003632903.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 153 3e-35
gb|AGQ50378.1| ribosomal protein S12 (chloroplast) [Rumex acetosa] 153 4e-35
ref|XP_003534892.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RN... 151 1e-34
ref|XP_003634981.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 147 2e-33
gb|AGP51306.1| ribosomal protein S12 (chloroplast) [Triticum aes... 145 1e-32
ref|YP_008239072.1| ribosomal protein S12 (chloroplast) [Triticu... 145 1e-32
ref|XP_003576003.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 145 1e-32
ref|XP_003571809.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 145 1e-32
ref|XP_003559318.1| PREDICTED: 30S ribosomal protein S12-B, chlo... 145 1e-32
>ref|XP_004154212.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
sativus]
Length = 127
Score = 187 bits (475), Expect = 2e-45
Identities = 96/120 (80%), Positives = 105/120 (87%)
Frame = -3
Query: 614 SKEANDPMTSKELNEDQYQVKISCTVQ*SGSKGDLSVNYSTITPEKPNSALRKVARVRLP 435
S E DPMTSKELNE+ Y+V+IS TV SG KGDLSVN+STITP+KPNSALRKVARVRL
Sbjct: 8 SNEEKDPMTSKELNEEPYEVQISRTVLSSGCKGDLSVNFSTITPKKPNSALRKVARVRLT 67
Query: 434 SGYEITAYIPGIGHNSQELSVVLVRGGRHKDIPGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
SG+EITAYIPGIGHN QE SVVLVRGGR KD+PG+RYHIVRG LDAVG+KDR QGR SAL
Sbjct: 68 SGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGLRYHIVRGNLDAVGVKDRQQGRSSAL 127
>gb|ERM95251.1| hypothetical protein AMTR_s02071p00004290 [Amborella trichopoda]
Length = 140
Score = 177 bits (450), Expect = 2e-42
Identities = 93/120 (77%), Positives = 101/120 (84%)
Frame = -3
Query: 614 SKEANDPMTSKELNEDQYQVKISCTVQ*SGSKGDLSVNYSTITPEKPNSALRKVARVRLP 435
S E DP+TSKELNE+ Y+ S SKGDLSVN+STITP+KPNSALRKVARVRL
Sbjct: 30 SSEEKDPITSKELNEEPYE---------SDSKGDLSVNFSTITPKKPNSALRKVARVRLT 80
Query: 434 SGYEITAYIPGIGHNSQELSVVLVRGGRHKDIPGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
SG+EITAYIPGIGHNSQE SVVLVRGGR KD+PGVRYHIVRGTLDAVG+KDR QGR SAL
Sbjct: 81 SGFEITAYIPGIGHNSQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 140
>ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
gi|350996572|gb|AEQ37083.1| ribosomal protein S12
[Datura stramonium]
Length = 137
Score = 171 bits (434), Expect = 1e-40
Identities = 88/102 (86%), Positives = 94/102 (92%)
Frame = -3
Query: 560 QVKISCTVQ*SGSKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQE 381
+V ISCTV SGSKGDLSVN+STITP+KPNSALRKVARVRL SG+EITAYIPGIGHNSQE
Sbjct: 36 RVYISCTVLKSGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQE 95
Query: 380 LSVVLVRGGRHKDIPGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
SVVLVRGGR KD+PGVRYHIVRGTLDAVG+KDR QGR SAL
Sbjct: 96 HSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 137
>gb|AEQ37137.1| ribosomal protein S12 (chloroplast) [Ginkgo biloba]
gi|350996664|gb|AEQ37174.1| ribosomal protein S12
(chloroplast) [Ginkgo biloba]
Length = 141
Score = 166 bits (420), Expect = 5e-39
Identities = 86/106 (81%), Positives = 94/106 (88%)
Frame = -3
Query: 560 QVKISCTVQ*SGSKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQE 381
+V ISCTV SG KG+LSVN+ST TP+KPNSALRKVARVRL SG+EITAYIPGIGHN QE
Sbjct: 36 RVYISCTVLLSGGKGNLSVNFSTTTPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQE 95
Query: 380 LSVVLVRGGRHKDIPGVRYHIVRGTLDAVGLKDRLQGRYSAL*ILI 243
SVVLVRGGR KD+PGVRYHIVRGTLDAVG+KDR QGR SAL I+I
Sbjct: 96 HSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSALYIII 141
>ref|XP_004514805.1| PREDICTED: NAD(P)H-quinone oxidoreductase subunit 2 B,
chloroplastic-like [Cicer arietinum]
Length = 864
Score = 163 bits (413), Expect = 3e-38
Identities = 87/120 (72%), Positives = 93/120 (77%)
Frame = -3
Query: 626 RENLSKEANDPMTSKELNEDQYQVKISCTVQ*SGSKGDLSVNYSTITPEKPNSALRKVAR 447
R+ S E DPMT KELNED K DLSVN+STITP+KPNSALRKVAR
Sbjct: 53 RKEFSNEKKDPMTWKELNED---------------KDDLSVNFSTITPKKPNSALRKVAR 97
Query: 446 VRLPSGYEITAYIPGIGHNSQELSVVLVRGGRHKDIPGVRYHIVRGTLDAVGLKDRLQGR 267
VRL SG+EITAYIPGIGHN QE SVVLVRGGR KD+PGVRYHIVRGTLDAVG+KDR QGR
Sbjct: 98 VRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGR 157
>sp|A4GYN8.1|RR12B_POPTR RecName: Full=30S ribosomal protein S12-B, chloroplastic
gi|133712086|gb|ABO36729.1| 30S ribosomal protein S12
[Populus trichocarpa]
Length = 135
Score = 161 bits (407), Expect = 2e-37
Identities = 81/94 (86%), Positives = 87/94 (92%)
Frame = -3
Query: 548 SCTVQ*SGSKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQELSVV 369
+CT SGSKGDLSVN+STITP+KPNSALRKVARVRL SG+EITAYIPGIGHNSQE SVV
Sbjct: 33 TCTRVYSGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSVV 92
Query: 368 LVRGGRHKDIPGVRYHIVRGTLDAVGLKDRLQGR 267
LVRGGR KD+PGVRYHIVRGTLDAVG+KDR QGR
Sbjct: 93 LVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGR 126
>gb|ESW29186.1| hypothetical protein PHAVU_002G050200g, partial [Phaseolus
vulgaris]
Length = 92
Score = 160 bits (405), Expect = 3e-37
Identities = 81/92 (88%), Positives = 86/92 (93%)
Frame = -3
Query: 530 SGSKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQELSVVLVRGGR 351
SGSKGDLSVN+STITP+KPNSALRKVARVRL SG+EITAYIPGIGHN QE SVVLVRGGR
Sbjct: 1 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGR 60
Query: 350 HKDIPGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
KD+PGVRYHIVRGTLDAVG+KDR QGR SAL
Sbjct: 61 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 92
>gb|EPS74518.1| hypothetical protein M569_00235, partial [Genlisea aurea]
Length = 92
Score = 160 bits (405), Expect = 3e-37
Identities = 81/92 (88%), Positives = 86/92 (93%)
Frame = -3
Query: 530 SGSKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQELSVVLVRGGR 351
SGSKGDLSVN+STITP+KPNSALRKVARVRL SG+EITAYIPGIGHNSQE S VLVRGGR
Sbjct: 1 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSSVLVRGGR 60
Query: 350 HKDIPGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
KD+PGVRYHIVRGTLDAVG+KDR QGR SAL
Sbjct: 61 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 92
>ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygrometrica]
gi|340549431|gb|AEK53253.1| ribosomal protein S12
(chloroplast) [Boea hygrometrica]
Length = 134
Score = 160 bits (405), Expect = 3e-37
Identities = 81/92 (88%), Positives = 86/92 (93%)
Frame = -3
Query: 530 SGSKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQELSVVLVRGGR 351
SGSKGDLSVN+STITP+KPNSALRKVARVRL SG+EITAYIPGIGHNSQE S VLVRGGR
Sbjct: 43 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNSQEHSSVLVRGGR 102
Query: 350 HKDIPGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
KD+PGVRYHIVRGTLDAVG+KDR QGR SAL
Sbjct: 103 VKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL 134
>ref|XP_003599578.1| NAD(P)H-quinone oxidoreductase subunit 2 A [Medicago truncatula]
gi|355488626|gb|AES69829.1| NAD(P)H-quinone
oxidoreductase subunit 2 A [Medicago truncatula]
Length = 871
Score = 160 bits (405), Expect = 3e-37
Identities = 85/115 (73%), Positives = 91/115 (79%)
Frame = -3
Query: 614 SKEANDPMTSKELNEDQYQVKISCTVQ*SGSKGDLSVNYSTITPEKPNSALRKVARVRLP 435
S E DP+TSKELNED K DLSVN+STITP+KPNSALRKVARVRL
Sbjct: 63 SNEEKDPITSKELNED---------------KDDLSVNFSTITPKKPNSALRKVARVRLT 107
Query: 434 SGYEITAYIPGIGHNSQELSVVLVRGGRHKDIPGVRYHIVRGTLDAVGLKDRLQG 270
SG+EITAYIPGIGHN QE SVVLVRGGR KD+PGVRYHIVRGTLDAVG+KDR QG
Sbjct: 108 SGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQG 162
>ref|XP_003632904.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Vitis
vinifera]
Length = 115
Score = 155 bits (391), Expect = 1e-35
Identities = 78/92 (84%), Positives = 83/92 (90%)
Frame = -3
Query: 530 SGSKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQELSVVLVRGGR 351
SGSKGDLS+N STITP+KPNSALRKVARVRL SG+EIT YIPGIGHNSQE VVLVRGGR
Sbjct: 24 SGSKGDLSINLSTITPKKPNSALRKVARVRLTSGFEITTYIPGIGHNSQEHFVVLVRGGR 83
Query: 350 HKDIPGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
KD+PGVRYHIVRGTLDAVG+KD QGR SAL
Sbjct: 84 VKDLPGVRYHIVRGTLDAVGVKDHQQGRSSAL 115
>ref|XP_003632903.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Vitis
vinifera]
Length = 162
Score = 153 bits (387), Expect = 3e-35
Identities = 78/92 (84%), Positives = 82/92 (89%)
Frame = -3
Query: 530 SGSKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQELSVVLVRGGR 351
SGSKGDLSVN STITP+KPNSALRKVARVRL SG+EIT YIPGIGHNSQE VVLVRGGR
Sbjct: 71 SGSKGDLSVNLSTITPKKPNSALRKVARVRLTSGFEITTYIPGIGHNSQEHFVVLVRGGR 130
Query: 350 HKDIPGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
KD+PGVRYHIVRGTLD VG+KD QGR SAL
Sbjct: 131 VKDLPGVRYHIVRGTLDPVGVKDHQQGRSSAL 162
>gb|AGQ50378.1| ribosomal protein S12 (chloroplast) [Rumex acetosa]
Length = 89
Score = 153 bits (386), Expect = 4e-35
Identities = 77/88 (87%), Positives = 82/88 (93%)
Frame = -3
Query: 518 GDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQELSVVLVRGGRHKDI 339
GDLSVN+STITP+KPNSALRKVARVRL SG+EITAYIPGIGHN QE SVVLVRGGR KD+
Sbjct: 2 GDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDL 61
Query: 338 PGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
PGVRYHIVRGTLDAVG+KDR QGR SAL
Sbjct: 62 PGVRYHIVRGTLDAVGVKDRQQGRSSAL 89
>ref|XP_003534892.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal RNA assembly protein
KRR1-like [Glycine max]
Length = 269
Score = 151 bits (382), Expect = 1e-34
Identities = 77/91 (84%), Positives = 82/91 (90%)
Frame = -3
Query: 530 SGSKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQELSVVLVRGGR 351
SGSKGDLSVN+STITP+KPNSALRKVARVRL G+EITAYIPGI HN QE SVVLVRGGR
Sbjct: 64 SGSKGDLSVNFSTITPKKPNSALRKVARVRLTFGFEITAYIPGIDHNLQEHSVVLVRGGR 123
Query: 350 HKDIPGVRYHIVRGTLDAVGLKDRLQGRYSA 258
KD+PGV YHIVRGTLDAVG+KDR QGR SA
Sbjct: 124 VKDLPGVTYHIVRGTLDAVGVKDRQQGRSSA 154
>ref|XP_003634981.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Vitis
vinifera]
Length = 185
Score = 147 bits (372), Expect = 2e-33
Identities = 76/92 (82%), Positives = 80/92 (86%)
Frame = -3
Query: 530 SGSKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQELSVVLVRGGR 351
SGSKGDLSVN STITP+KPNS L KVARVRL SG+EIT YIPGIGHNSQE VVLVRGGR
Sbjct: 94 SGSKGDLSVNLSTITPKKPNSTLCKVARVRLTSGFEITTYIPGIGHNSQEHFVVLVRGGR 153
Query: 350 HKDIPGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
KD+PGVRYHIVRGTLDAV +KD QGR SAL
Sbjct: 154 VKDLPGVRYHIVRGTLDAVEVKDHQQGRSSAL 185
>gb|AGP51306.1| ribosomal protein S12 (chloroplast) [Triticum aestivum]
Length = 133
Score = 145 bits (365), Expect = 1e-32
Identities = 73/90 (81%), Positives = 81/90 (90%)
Frame = -3
Query: 524 SKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQELSVVLVRGGRHK 345
SKGDLSV++STI P+KPNSALRKVARVRL SG+EITAYIPGIGHN QE SVVLVRGGR K
Sbjct: 44 SKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 103
Query: 344 DIPGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
D+PGVRY I+RGTLDAV +K+R QGR SAL
Sbjct: 104 DLPGVRYRIIRGTLDAVAVKNRQQGRSSAL 133
>ref|YP_008239072.1| ribosomal protein S12 (chloroplast) [Triticum monococcum]
gi|533310128|ref|YP_008474279.1| ribosomal protein S12
(chloroplast) [Aegilops tauschii]
gi|384406875|gb|AFH89532.1| ribosomal protein S12
(chloroplast) [Aegilops tauschii]
gi|521300975|gb|AGP50778.1| ribosomal protein S12
(chloroplast) [Hordeum vulgare subsp. vulgare]
gi|521301168|gb|AGP50969.1| ribosomal protein S12
(chloroplast) [Hordeum vulgare subsp. spontaneum]
gi|521301213|gb|AGP51013.1| ribosomal protein S12
(chloroplast) [Triticum monococcum]
Length = 132
Score = 145 bits (365), Expect = 1e-32
Identities = 73/90 (81%), Positives = 81/90 (90%)
Frame = -3
Query: 524 SKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQELSVVLVRGGRHK 345
SKGDLSV++STI P+KPNSALRKVARVRL SG+EITAYIPGIGHN QE SVVLVRGGR K
Sbjct: 43 SKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 102
Query: 344 DIPGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
D+PGVRY I+RGTLDAV +K+R QGR SAL
Sbjct: 103 DLPGVRYRIIRGTLDAVAVKNRQQGRSSAL 132
>ref|XP_003576003.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like
[Brachypodium distachyon]
Length = 95
Score = 145 bits (365), Expect = 1e-32
Identities = 73/90 (81%), Positives = 81/90 (90%)
Frame = -3
Query: 524 SKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQELSVVLVRGGRHK 345
SKGDLSV++STI P+KPNSALRKVARVRL SG+EITAYIPGIGHN QE SVVLVRGGR K
Sbjct: 6 SKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 65
Query: 344 DIPGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
D+PGVRY I+RGTLDAV +K+R QGR SAL
Sbjct: 66 DLPGVRYRIIRGTLDAVAVKNRQQGRSSAL 95
>ref|XP_003571809.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like
[Brachypodium distachyon]
Length = 94
Score = 145 bits (365), Expect = 1e-32
Identities = 73/90 (81%), Positives = 81/90 (90%)
Frame = -3
Query: 524 SKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQELSVVLVRGGRHK 345
SKGDLSV++STI P+KPNSALRKVARVRL SG+EITAYIPGIGHN QE SVVLVRGGR K
Sbjct: 5 SKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 64
Query: 344 DIPGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
D+PGVRY I+RGTLDAV +K+R QGR SAL
Sbjct: 65 DLPGVRYRIIRGTLDAVAVKNRQQGRSSAL 94
>ref|XP_003559318.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like
[Brachypodium distachyon]
Length = 93
Score = 145 bits (365), Expect = 1e-32
Identities = 73/90 (81%), Positives = 81/90 (90%)
Frame = -3
Query: 524 SKGDLSVNYSTITPEKPNSALRKVARVRLPSGYEITAYIPGIGHNSQELSVVLVRGGRHK 345
SKGDLSV++STI P+KPNSALRKVARVRL SG+EITAYIPGIGHN QE SVVLVRGGR K
Sbjct: 4 SKGDLSVDFSTINPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVK 63
Query: 344 DIPGVRYHIVRGTLDAVGLKDRLQGRYSAL 255
D+PGVRY I+RGTLDAV +K+R QGR SAL
Sbjct: 64 DLPGVRYRIIRGTLDAVAVKNRQQGRSSAL 93