BLASTX nr result

ID: Jatropha_contig00018974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00018974
         (623 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002537227.1| conserved hypothetical protein [Ricinus comm...    44   4e-06

>ref|XP_002537227.1| conserved hypothetical protein [Ricinus communis]
           gi|223517057|gb|EEF25156.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score = 43.5 bits (101), Expect(2) = 4e-06
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = +2

Query: 11  VLDILANYALLLGRPWLHPLGAIPSHCTEKSKYL 112
           VLDI A++ LLLGRPW+H L A+PS   +K K++
Sbjct: 1   VLDIPASFNLLLGRPWIHALEAVPSTLHQKVKFI 34



 Score = 33.5 bits (75), Expect(2) = 4e-06
 Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 15/105 (14%)
 Frame = +1

Query: 85  TLHRKVKVPWGTDVVTI---------------NVQEDLNVAAVEGLEATVPLSGFQVAVI 219
           TLH+KVK   G  V++I                +Q D N+   E ++  +PL  F     
Sbjct: 26  TLHQKVKFIQGNRVISIFGDPEEPVLDPIQVLEIQHDENLELAETVKEYLPLPNFS---- 81

Query: 220 DNAVITEDKSAVNKMSPFSRKMMKKMQWQYGKGLGRDLQRRFEPV 354
           DN  + E              M + M++  G GLGR  Q   EP+
Sbjct: 82  DNVFVGE--------------MFRSMRYLPGSGLGRHHQGIVEPI 112


Top