BLASTX nr result
ID: Jatropha_contig00018924
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00018924
(681 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY19960.1| RNA-directed DNA polymerase, putative [Theobroma ... 83 6e-14
gb|EOY10467.1| RNA-directed DNA polymerase (Reverse transcriptas... 83 8e-14
gb|EOY01054.1| RNA-directed DNA polymerase (Reverse transcriptas... 83 8e-14
gb|EOX94716.1| RNA-directed DNA polymerase (Reverse transcriptas... 83 8e-14
gb|EOY21879.1| RNA-directed DNA polymerase (Reverse transcriptas... 77 1e-13
dbj|BAJ53209.1| JHL23C09.1 [Jatropha curcas] 73 2e-13
gb|EOY15725.1| RNA-directed DNA polymerase (Reverse transcriptas... 78 3e-13
gb|EOY03806.1| RNA-directed DNA polymerase [Theobroma cacao] 80 4e-13
gb|EOY21231.1| RNA-directed DNA polymerase [Theobroma cacao] 77 5e-13
gb|EOY20481.1| RNA-directed DNA polymerase (Reverse transcriptas... 77 5e-13
gb|EOX94216.1| RNA-directed DNA polymerase [Theobroma cacao] 80 5e-13
gb|EOY13888.1| RNA-directed DNA polymerase [Theobroma cacao] 79 1e-12
gb|EOX94372.1| Uncharacterized protein TCM_003960 [Theobroma cacao] 75 1e-12
gb|EOX95167.1| RNA-directed DNA polymerase (Reverse transcriptas... 75 1e-12
gb|EOY20987.1| RNA-directed DNA polymerase (Reverse transcriptas... 78 2e-12
gb|EOY28052.1| RNA-directed DNA polymerase (Reverse transcriptas... 74 4e-12
gb|EOY22161.1| RNA-directed DNA polymerase (Reverse transcriptas... 77 5e-12
gb|EOY15970.1| RNA-directed DNA polymerase, putative [Theobroma ... 77 5e-12
emb|CAN71859.1| hypothetical protein VITISV_012970 [Vitis vinifera] 66 5e-12
gb|EOX99370.1| RNA-directed DNA polymerase [Theobroma cacao] 77 6e-12
>gb|EOY19960.1| RNA-directed DNA polymerase, putative [Theobroma cacao]
Length = 2200
Score = 83.2 bits (204), Expect = 6e-14
Identities = 36/72 (50%), Positives = 54/72 (75%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
QLY++R+++ ++K+ HS+ + +LVLK+ PN HD RGK+ PNWEGPF++KK FS+GAL
Sbjct: 1740 QLYQKRMMRAYDKKAHSRQFREGELVLKRTLPNQHDPRGKWTPNWEGPFVVKKAFSRGAL 1799
Query: 200 RLPDMEAMNSLN 235
L +M+ M N
Sbjct: 1800 ILAEMDGMEFSN 1811
>gb|EOY10467.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 139
Score = 82.8 bits (203), Expect = 8e-14
Identities = 36/72 (50%), Positives = 54/72 (75%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
QLY++R+++ ++K+ HS+ + +LVLK++ PN HDLRGK+ PNWEGPF++KK FS GAL
Sbjct: 50 QLYQKRMMRAYDKKAHSRQFREGELVLKRILPNQHDLRGKWTPNWEGPFVVKKAFSGGAL 109
Query: 200 RLPDMEAMNSLN 235
L +M+ N
Sbjct: 110 ILAEMDGREFSN 121
>gb|EOY01054.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 1047
Score = 82.8 bits (203), Expect = 8e-14
Identities = 36/72 (50%), Positives = 54/72 (75%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
QLY++R+++ ++K+ HS+ + +LVLK++ PN HDLRGK+ PNWEGPF++KK FS GAL
Sbjct: 964 QLYQKRMMRAYDKKAHSRQFREGELVLKRILPNQHDLRGKWTPNWEGPFVVKKAFSGGAL 1023
Query: 200 RLPDMEAMNSLN 235
L +M+ N
Sbjct: 1024 ILAEMDGREFSN 1035
>gb|EOX94716.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 642
Score = 82.8 bits (203), Expect = 8e-14
Identities = 36/72 (50%), Positives = 54/72 (75%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
QLY++R+++ ++K+ HS+ + +LVLK++ PN HDLRGK+ PNWEGPF++KK FS GAL
Sbjct: 559 QLYQKRMMRAYDKKAHSRQFREGELVLKRILPNQHDLRGKWTPNWEGPFVVKKAFSGGAL 618
Query: 200 RLPDMEAMNSLN 235
L +M+ N
Sbjct: 619 ILAEMDGREFSN 630
>gb|EOY21879.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease
H, putative [Theobroma cacao]
Length = 433
Score = 76.6 bits (187), Expect(2) = 1e-13
Identities = 34/72 (47%), Positives = 51/72 (70%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
QLY++R+++ + K+ HS+ + +LVLK++ PN HD GK+ PNWEGPF++KK FS GAL
Sbjct: 350 QLYQKRMMRAYGKKAHSRQFREGELVLKRILPNQHDPCGKWTPNWEGPFVVKKAFSGGAL 409
Query: 200 RLPDMEAMNSLN 235
L +M+ N
Sbjct: 410 ILTEMDGREFSN 421
Score = 25.8 bits (55), Expect(2) = 1e-13
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 217 GNEFTEPINLDRLKKFY 267
G EF+ P+N D +KK++
Sbjct: 416 GREFSNPVNADAVKKYF 432
>dbj|BAJ53209.1| JHL23C09.1 [Jatropha curcas]
Length = 525
Score = 73.2 bits (178), Expect(2) = 2e-13
Identities = 33/72 (45%), Positives = 51/72 (70%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
Q+Y+RR+ +HFNKRV + L+ LVLK++ + D RGKF+P+W GP+++KKI S GA+
Sbjct: 442 QVYQRRMARHFNKRVKDRKLEEGCLVLKEIRQPVIDPRGKFRPHWAGPYVLKKILSGGAV 501
Query: 200 RLPDMEAMNSLN 235
L D++ + N
Sbjct: 502 ILTDLDGLEFTN 513
Score = 28.9 bits (63), Expect(2) = 2e-13
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 217 GNEFTEPINLDRLKKFYV 270
G EFT P NLD+LK+++V
Sbjct: 508 GLEFTNPCNLDQLKRYFV 525
>gb|EOY15725.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 284
Score = 77.8 bits (190), Expect(2) = 3e-13
Identities = 33/66 (50%), Positives = 50/66 (75%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
Q+Y+RR+++ + K+VH + + +LVLK++ PN D RGK+ PNWEGP+++KK FS GAL
Sbjct: 201 QMYQRRMIRAYEKKVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGAL 260
Query: 200 RLPDME 217
L DM+
Sbjct: 261 ILTDMD 266
Score = 23.5 bits (49), Expect(2) = 3e-13
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 217 GNEFTEPINLDRLKKFY 267
G + PIN D +KK+Y
Sbjct: 267 GGDLPNPINADAVKKYY 283
>gb|EOY03806.1| RNA-directed DNA polymerase [Theobroma cacao]
Length = 386
Score = 80.5 bits (197), Expect = 4e-13
Identities = 36/72 (50%), Positives = 53/72 (73%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
QLY++R+++ ++K+ HS+ + +LVLK++ PN HD RGK+ PNWEGPF+IKK FS GAL
Sbjct: 303 QLYQKRMMRAYDKKAHSRQFREGELVLKRILPNQHDPRGKWTPNWEGPFVIKKAFSGGAL 362
Query: 200 RLPDMEAMNSLN 235
L +M+ N
Sbjct: 363 ILAEMDGREFSN 374
>gb|EOY21231.1| RNA-directed DNA polymerase [Theobroma cacao]
Length = 338
Score = 77.0 bits (188), Expect(2) = 5e-13
Identities = 33/66 (50%), Positives = 50/66 (75%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
Q+Y+RR+++ + K+VH + + +LVLK++ PN D RGK+ PNWEGP+++KK FS GAL
Sbjct: 255 QMYQRRMMRAYEKKVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGAL 314
Query: 200 RLPDME 217
L DM+
Sbjct: 315 ILADMD 320
Score = 23.5 bits (49), Expect(2) = 5e-13
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 217 GNEFTEPINLDRLKKFY 267
G + PIN D +KK+Y
Sbjct: 321 GGDLPNPINADAVKKYY 337
>gb|EOY20481.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 210
Score = 77.0 bits (188), Expect(2) = 5e-13
Identities = 33/66 (50%), Positives = 50/66 (75%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
Q+Y+RR+++ + K+VH + + +LVLK++ PN D RGK+ PNWEGP+++KK FS GAL
Sbjct: 127 QMYQRRMMRAYEKKVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGAL 186
Query: 200 RLPDME 217
L DM+
Sbjct: 187 ILADMD 192
Score = 23.5 bits (49), Expect(2) = 5e-13
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 217 GNEFTEPINLDRLKKFY 267
G + PIN D +KK+Y
Sbjct: 193 GGDLPNPINADAVKKYY 209
>gb|EOX94216.1| RNA-directed DNA polymerase [Theobroma cacao]
Length = 460
Score = 80.1 bits (196), Expect = 5e-13
Identities = 35/72 (48%), Positives = 53/72 (73%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
QLY++R+++ ++K+ HS+ + +LVLK++ PN HD RGK+ PNWEGPF++KK FS GAL
Sbjct: 377 QLYQKRMMRAYDKKAHSRQFREGELVLKRILPNQHDPRGKWTPNWEGPFVVKKAFSGGAL 436
Query: 200 RLPDMEAMNSLN 235
L +M+ N
Sbjct: 437 ILAEMDGREFSN 448
>gb|EOY13888.1| RNA-directed DNA polymerase [Theobroma cacao]
Length = 308
Score = 79.0 bits (193), Expect = 1e-12
Identities = 34/72 (47%), Positives = 53/72 (73%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
QLY++R+++ ++K+ HS+ + +LVL+++ PN HD RGK+ PNWEGPF++KK FS GAL
Sbjct: 183 QLYQKRMMRAYDKKAHSRQFREGELVLRRILPNQHDPRGKWTPNWEGPFVVKKAFSGGAL 242
Query: 200 RLPDMEAMNSLN 235
L +M+ N
Sbjct: 243 ILAEMDGREFSN 254
>gb|EOX94372.1| Uncharacterized protein TCM_003960 [Theobroma cacao]
Length = 2336
Score = 75.5 bits (184), Expect(2) = 1e-12
Identities = 32/66 (48%), Positives = 50/66 (75%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
++Y+RR+++ + K+VH + + +LVLK++ PN D RGK+ PNWEGP+++KK FS GAL
Sbjct: 2253 KMYQRRMMRAYEKKVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGAL 2312
Query: 200 RLPDME 217
L DM+
Sbjct: 2313 ILTDMD 2318
Score = 23.5 bits (49), Expect(2) = 1e-12
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 217 GNEFTEPINLDRLKKFY 267
G + PIN D +KK+Y
Sbjct: 2319 GGDLPNPINADAVKKYY 2335
>gb|EOX95167.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 210
Score = 75.1 bits (183), Expect(2) = 1e-12
Identities = 32/66 (48%), Positives = 50/66 (75%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
Q+Y+RR+++ + K+VH + + +LVLK++ PN D RGK+ PNWEGP+++KK FS GAL
Sbjct: 127 QMYQRRMMRAYEKKVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGAL 186
Query: 200 RLPDME 217
L +M+
Sbjct: 187 ILANMD 192
Score = 23.9 bits (50), Expect(2) = 1e-12
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 205 ARHGGNEFTEPINLDRLKKFY 267
A G + PIN D +KK+Y
Sbjct: 189 ANMDGGDLPNPINADAVKKYY 209
>gb|EOY20987.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 857
Score = 78.2 bits (191), Expect = 2e-12
Identities = 34/66 (51%), Positives = 50/66 (75%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
Q+Y+RR+++ + K+VH K + +LVLK++ PN D RGK+ PNWEGP+++KK FS GAL
Sbjct: 744 QMYQRRMMRAYEKKVHPKQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGAL 803
Query: 200 RLPDME 217
L DM+
Sbjct: 804 ILADMD 809
>gb|EOY28052.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 284
Score = 73.6 bits (179), Expect(2) = 4e-12
Identities = 31/66 (46%), Positives = 50/66 (75%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
Q+Y+RR+++ + K+VH + + +LVLK++ PN D +GK+ PNWEGP+++KK FS GAL
Sbjct: 201 QMYQRRMMRAYEKKVHPRQFREGELVLKRILPNQTDFQGKWMPNWEGPYVVKKAFSGGAL 260
Query: 200 RLPDME 217
L +M+
Sbjct: 261 ILANMD 266
Score = 23.9 bits (50), Expect(2) = 4e-12
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 205 ARHGGNEFTEPINLDRLKKFY 267
A G + PIN D +KK+Y
Sbjct: 263 ANMDGGDLPNPINTDAVKKYY 283
>gb|EOY22161.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 136
Score = 77.0 bits (188), Expect = 5e-12
Identities = 34/72 (47%), Positives = 52/72 (72%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
QLY++R+++ ++K+ HS+ + +LVLK++ PN HD R K+ PNWEGPF++KK FS GAL
Sbjct: 53 QLYQKRMMRAYDKKAHSRQFREGELVLKRILPNQHDPRRKWTPNWEGPFVVKKAFSGGAL 112
Query: 200 RLPDMEAMNSLN 235
L +M+ N
Sbjct: 113 ILAEMDGREFSN 124
>gb|EOY15970.1| RNA-directed DNA polymerase, putative [Theobroma cacao]
Length = 1685
Score = 77.0 bits (188), Expect = 5e-12
Identities = 33/66 (50%), Positives = 50/66 (75%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
Q+Y+RR+++ + K+VH + + +LVLK++ PN D RGK+ PNWEGP+++KK FS GAL
Sbjct: 1592 QMYQRRMMRAYEKKVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGAL 1651
Query: 200 RLPDME 217
L DM+
Sbjct: 1652 ILTDMD 1657
>emb|CAN71859.1| hypothetical protein VITISV_012970 [Vitis vinifera]
Length = 1710
Score = 65.9 bits (159), Expect(2) = 5e-12
Identities = 29/64 (45%), Positives = 45/64 (70%)
Frame = +2
Query: 26 YKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGALRL 205
Y+R++ F KRV +LL++ DLVLK + I +LRGKF+PNW GP+ I+++ +GA L
Sbjct: 1629 YQRKMASAFKKRVRPRLLRIGDLVLKAIKGLIRNLRGKFRPNWSGPYFIRELTPEGAAWL 1688
Query: 206 PDME 217
D++
Sbjct: 1689 MDLD 1692
Score = 31.2 bits (69), Expect(2) = 5e-12
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +1
Query: 217 GNEFTEPINLDRLKKFYV 270
GN F+EP N+D+LK++YV
Sbjct: 1693 GNRFSEPTNVDQLKRYYV 1710
>gb|EOX99370.1| RNA-directed DNA polymerase [Theobroma cacao]
Length = 329
Score = 76.6 bits (187), Expect = 6e-12
Identities = 43/96 (44%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Frame = +2
Query: 20 QLYKRRIVKHFNKRVHSKLLKVRDLVLKQMWPNIHDLRGKFKPNWEGPFLIKKIFSKGAL 199
QLY++R+++ ++K+ HS+ + +LVLK+ PN HD R K+ PNWEGPF++KK FS GAL
Sbjct: 231 QLYQKRMMRAYDKKAHSRQFREGELVLKRTLPNQHDPREKWTPNWEGPFVVKKAFSGGAL 290
Query: 200 RLPDM---EAMNSLNQSIWID*RNF-MYNSKRLWQS 295
L +M E N +N+ I+ NF + N KR +S
Sbjct: 291 ILAEMDRREFSNPVNE-IFCKKENFQVENLKRRLES 325