BLASTX nr result
ID: Jatropha_contig00018860
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00018860
(620 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534420.1| retinoblastoma-binding protein, putative [Ri... 238 1e-65
gb|EEE86695.2| hypothetical protein POPTR_0004s18130g [Populus t... 234 3e-64
ref|XP_002306184.1| nucleosome/chromatin assembly factor group [... 234 3e-64
gb|EEE86915.2| hypothetical protein POPTR_0009s13750g [Populus t... 232 2e-63
ref|XP_002312960.1| nucleosome/chromatin assembly factor group [... 232 2e-63
gb|ESR35832.1| hypothetical protein CICLE_v10028562mg [Citrus cl... 211 1e-57
ref|XP_004144845.1| PREDICTED: WD-40 repeat-containing protein M... 204 7e-56
gb|EOX97656.1| Transducin family protein / WD-40 repeat family p... 201 2e-54
gb|ABC79303.1| putative retinoblastoma binding protein [Gossypiu... 195 9e-53
gb|ESQ50844.1| hypothetical protein EUTSA_v10022705mg [Eutrema s... 192 2e-51
ref|XP_004289874.1| PREDICTED: WD-40 repeat-containing protein M... 187 6e-51
ref|XP_006297756.1| hypothetical protein CARUB_v10013791mg [Caps... 189 1e-50
ref|XP_002886076.1| hypothetical protein ARALYDRAFT_480561 [Arab... 186 1e-49
ref|XP_006283702.1| hypothetical protein CARUB_v10004773mg, part... 189 4e-49
gb|AAM65591.1| putative WD-40 repeat protein, MSI2 [Arabidopsis ... 183 9e-49
gb|ESQ53612.1| hypothetical protein EUTSA_v10025286mg [Eutrema s... 187 2e-48
ref|NP_179269.1| WD-40 repeat-containing protein MSI2 [Arabidops... 182 3e-48
ref|XP_002278931.1| PREDICTED: WD-40 repeat-containing protein M... 181 1e-47
ref|XP_002867094.1| hypothetical protein ARALYDRAFT_912880 [Arab... 183 3e-47
gb|AAB70244.1| WD-40 repeat protein [Arabidopsis thaliana] 183 4e-47
>ref|XP_002534420.1| retinoblastoma-binding protein, putative [Ricinus communis]
gi|223525325|gb|EEF27964.1| retinoblastoma-binding
protein, putative [Ricinus communis]
Length = 415
Score = 238 bits (608), Expect(2) = 1e-65
Identities = 112/136 (82%), Positives = 126/136 (92%), Gaps = 1/136 (0%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPS-FAVHRLVLGTHTSDDF 307
FSVWKKNTPFLYDLVISHPLEWPSLTV W+PL+AP+PHPT+PS F+VH+LVLGTHTSDDF
Sbjct: 22 FSVWKKNTPFLYDLVISHPLEWPSLTVHWLPLAAPLPHPTNPSSFSVHKLVLGTHTSDDF 81
Query: 308 PNFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAK 487
PNFLMIADAVLP R A+ KFD + E+S+IPKVEI+QKI VDGEVNRARCMPQN A +AAK
Sbjct: 82 PNFLMIADAVLPIRGAQPKFDAKSEDSLIPKVEISQKIRVDGEVNRARCMPQNPAFIAAK 141
Query: 488 TSGCEVYVFDSTKQAE 535
TSGC+VYVFDSTKQ+E
Sbjct: 142 TSGCDVYVFDSTKQSE 157
Score = 37.7 bits (86), Expect(2) = 1e-65
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 570 LRGHDKERYGLCWSPFK 620
LRGHDKE YGL WSPFK
Sbjct: 170 LRGHDKEGYGLSWSPFK 186
>gb|EEE86695.2| hypothetical protein POPTR_0004s18130g [Populus trichocarpa]
Length = 417
Score = 234 bits (598), Expect(2) = 3e-64
Identities = 116/142 (81%), Positives = 124/142 (87%), Gaps = 3/142 (2%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPS-FAVHRLVLGTHTSDDF 307
FSVWKKNTP LYDLVISHPLEWPSLTVQWVPL+AP+PHPTDPS F++H+LVLGTHTSDDF
Sbjct: 19 FSVWKKNTPVLYDLVISHPLEWPSLTVQWVPLAAPLPHPTDPSSFSIHKLVLGTHTSDDF 78
Query: 308 PNFLMIADAVLPARNAEAKFDGR--PENSVIPKVEITQKILVDGEVNRARCMPQNSAIVA 481
PNFLM+ADAVLP A+AK D +SVIPKVEITQKI VDGEVNRARCMPQN AIV
Sbjct: 79 PNFLMVADAVLPTSVADAKIDTSCSSADSVIPKVEITQKIRVDGEVNRARCMPQNPAIVG 138
Query: 482 AKTSGCEVYVFDSTKQAENNNR 547
AKTSGCEVYVFDSTKQAE R
Sbjct: 139 AKTSGCEVYVFDSTKQAERKQR 160
Score = 37.4 bits (85), Expect(2) = 3e-64
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RL GHDKE YGL WSPFK
Sbjct: 168 RLTGHDKEGYGLSWSPFK 185
>ref|XP_002306184.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
Length = 417
Score = 234 bits (598), Expect(2) = 3e-64
Identities = 116/142 (81%), Positives = 124/142 (87%), Gaps = 3/142 (2%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPS-FAVHRLVLGTHTSDDF 307
FSVWKKNTP LYDLVISHPLEWPSLTVQWVPL+AP+PHPTDPS F++H+LVLGTHTSDDF
Sbjct: 19 FSVWKKNTPVLYDLVISHPLEWPSLTVQWVPLAAPLPHPTDPSSFSIHKLVLGTHTSDDF 78
Query: 308 PNFLMIADAVLPARNAEAKFDGR--PENSVIPKVEITQKILVDGEVNRARCMPQNSAIVA 481
PNFLM+ADAVLP A+AK D +SVIPKVEITQKI VDGEVNRARCMPQN AIV
Sbjct: 79 PNFLMVADAVLPTSVADAKIDTSCSSADSVIPKVEITQKIRVDGEVNRARCMPQNPAIVG 138
Query: 482 AKTSGCEVYVFDSTKQAENNNR 547
AKTSGCEVYVFDSTKQAE R
Sbjct: 139 AKTSGCEVYVFDSTKQAERKQR 160
Score = 37.4 bits (85), Expect(2) = 3e-64
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RL GHDKE YGL WSPFK
Sbjct: 168 RLTGHDKEGYGLSWSPFK 185
>gb|EEE86915.2| hypothetical protein POPTR_0009s13750g [Populus trichocarpa]
gi|550331669|gb|ERP57083.1| hypothetical protein
POPTR_0009s13750g [Populus trichocarpa]
gi|550331670|gb|ERP57084.1| hypothetical protein
POPTR_0009s13750g [Populus trichocarpa]
Length = 418
Score = 232 bits (591), Expect(2) = 2e-63
Identities = 116/142 (81%), Positives = 122/142 (85%), Gaps = 3/142 (2%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPS-FAVHRLVLGTHTSDDF 307
FSVWKKNTPFLYD VISHPLEWPSLTVQWVPL+ P+PH TDPS F+VH+LVLGTHTSDDF
Sbjct: 19 FSVWKKNTPFLYDFVISHPLEWPSLTVQWVPLATPLPHSTDPSSFSVHKLVLGTHTSDDF 78
Query: 308 PNFLMIADAVLPARNAEAKFD--GRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVA 481
PN+L+IADAVLP AEAK D G NSVIPKVEITQKI VDGEVNRAR MPQN AIV
Sbjct: 79 PNYLLIADAVLPTSVAEAKIDASGSSTNSVIPKVEITQKIRVDGEVNRARSMPQNPAIVG 138
Query: 482 AKTSGCEVYVFDSTKQAENNNR 547
AKTSGCEVYVFDSTKQAE R
Sbjct: 139 AKTSGCEVYVFDSTKQAERKQR 160
Score = 37.4 bits (85), Expect(2) = 2e-63
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RL GHDKE YGL WSPFK
Sbjct: 168 RLTGHDKEGYGLSWSPFK 185
>ref|XP_002312960.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
Length = 406
Score = 232 bits (591), Expect(2) = 2e-63
Identities = 116/142 (81%), Positives = 122/142 (85%), Gaps = 3/142 (2%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPS-FAVHRLVLGTHTSDDF 307
FSVWKKNTPFLYD VISHPLEWPSLTVQWVPL+ P+PH TDPS F+VH+LVLGTHTSDDF
Sbjct: 19 FSVWKKNTPFLYDFVISHPLEWPSLTVQWVPLATPLPHSTDPSSFSVHKLVLGTHTSDDF 78
Query: 308 PNFLMIADAVLPARNAEAKFD--GRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVA 481
PN+L+IADAVLP AEAK D G NSVIPKVEITQKI VDGEVNRAR MPQN AIV
Sbjct: 79 PNYLLIADAVLPTSVAEAKIDASGSSTNSVIPKVEITQKIRVDGEVNRARSMPQNPAIVG 138
Query: 482 AKTSGCEVYVFDSTKQAENNNR 547
AKTSGCEVYVFDSTKQAE R
Sbjct: 139 AKTSGCEVYVFDSTKQAERKQR 160
Score = 37.4 bits (85), Expect(2) = 2e-63
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RL GHDKE YGL WSPFK
Sbjct: 168 RLTGHDKEGYGLSWSPFK 185
>gb|ESR35832.1| hypothetical protein CICLE_v10028562mg [Citrus clementina]
Length = 406
Score = 211 bits (537), Expect(2) = 1e-57
Identities = 99/135 (73%), Positives = 112/135 (82%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
F+VWKKNTPFLYDL++SHPLEWPSLTV WVP S P P+ DP+FAVH+ VLGTHTS+DFP
Sbjct: 17 FTVWKKNTPFLYDLIVSHPLEWPSLTVHWVP-SPPQPYSADPTFAVHKFVLGTHTSEDFP 75
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
NFLMIADAVLP +++E+ G+ EN VIPKVEI QKI VDGEVNRARCMPQ +V KT
Sbjct: 76 NFLMIADAVLPTKDSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKT 135
Query: 491 SGCEVYVFDSTKQAE 535
S CEVYVFD KQAE
Sbjct: 136 SSCEVYVFDCAKQAE 150
Score = 38.5 bits (88), Expect(2) = 1e-57
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RL+GHDKE YGL WSPFK
Sbjct: 161 RLKGHDKEGYGLSWSPFK 178
>ref|XP_004144845.1| PREDICTED: WD-40 repeat-containing protein MSI2-like [Cucumis
sativus] gi|449515736|ref|XP_004164904.1| PREDICTED:
WD-40 repeat-containing protein MSI2-like [Cucumis
sativus]
Length = 393
Score = 204 bits (519), Expect(2) = 7e-56
Identities = 95/141 (67%), Positives = 114/141 (80%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
FS+WKKN+P+LYDL+ISH LEWPSLTV WVP SAP PH +PS AVH+LVLGTHTS+D P
Sbjct: 15 FSIWKKNSPYLYDLLISHSLEWPSLTVDWVP-SAPFPHQANPSLAVHKLVLGTHTSEDVP 73
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
NFLM+ADAV P + +E + D E+ ++PK+EITQKI V+GEVNRARCMPQN IV AKT
Sbjct: 74 NFLMVADAVFPVKASETRIDISEEDPILPKIEITQKIRVEGEVNRARCMPQNPEIVGAKT 133
Query: 491 SGCEVYVFDSTKQAENNNRMV 553
SGCEVYVF+ KQ E + +V
Sbjct: 134 SGCEVYVFNRAKQGEKDQGVV 154
Score = 39.7 bits (91), Expect(2) = 7e-56
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RLRGHDKE YGL WSPFK
Sbjct: 160 RLRGHDKEGYGLSWSPFK 177
>gb|EOX97656.1| Transducin family protein / WD-40 repeat family protein [Theobroma
cacao]
Length = 408
Score = 201 bits (512), Expect(2) = 2e-54
Identities = 98/137 (71%), Positives = 113/137 (82%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
F+VWKKNTPFLYDLVISHPLEWPSLTV WVP S+P P+ DPSF+VH+LVLGTHTS
Sbjct: 16 FTVWKKNTPFLYDLVISHPLEWPSLTVHWVP-SSPSPYGADPSFSVHKLVLGTHTSGGAS 74
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
+FLMIADAVLP AE+ F + ++ V PKVEITQ++LVDGEVNRARCMPQN I+ AKT
Sbjct: 75 DFLMIADAVLPTLAAESDFGAKNDDPVFPKVEITQRMLVDGEVNRARCMPQNPVIIGAKT 134
Query: 491 SGCEVYVFDSTKQAENN 541
SG EV+VFD TKQAE +
Sbjct: 135 SGSEVFVFDYTKQAEKD 151
Score = 37.4 bits (85), Expect(2) = 2e-54
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RLRGHDKE YGL WSP K
Sbjct: 161 RLRGHDKEGYGLSWSPLK 178
>gb|ABC79303.1| putative retinoblastoma binding protein [Gossypium hirsutum]
Length = 410
Score = 195 bits (496), Expect(2) = 9e-53
Identities = 95/134 (70%), Positives = 109/134 (81%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
FSVWKKNTPFLYDLVISHPLEWPSLTV WVP S+P P+ DP+F VH+LVLGTHTS P
Sbjct: 16 FSVWKKNTPFLYDLVISHPLEWPSLTVHWVP-SSPTPYGPDPTFNVHKLVLGTHTSGGAP 74
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
+FLMIADAVLP +E+ + ++ VIPKVEITQK+ VDGEVNRARCMPQN I+ AKT
Sbjct: 75 DFLMIADAVLPTLASESNIAAKNDDPVIPKVEITQKMRVDGEVNRARCMPQNPVIIGAKT 134
Query: 491 SGCEVYVFDSTKQA 532
SG +V+VFD KQA
Sbjct: 135 SGSDVFVFDYAKQA 148
Score = 38.1 bits (87), Expect(2) = 9e-53
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RLRGH+KE YGL WSPFK
Sbjct: 162 RLRGHEKEGYGLSWSPFK 179
>gb|ESQ50844.1| hypothetical protein EUTSA_v10022705mg [Eutrema salsugineum]
Length = 415
Score = 192 bits (489), Expect(2) = 2e-51
Identities = 93/134 (69%), Positives = 106/134 (79%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
FSVWKKNTPFLYDL+ISHPLEWPSLTV WVP S P P+ DP FAVH+L+LGTHTS
Sbjct: 18 FSVWKKNTPFLYDLMISHPLEWPSLTVHWVP-STPNPYAADPYFAVHKLILGTHTSGGAQ 76
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
+FLMIADAV+P +AE R ++ +IPKVEI QKI VDGEVNRARCMPQ S +V AKT
Sbjct: 77 DFLMIADAVIPTPDAEPDLGSRNQDPIIPKVEIRQKIRVDGEVNRARCMPQKSTLVGAKT 136
Query: 491 SGCEVYVFDSTKQA 532
SGCEV++FD K A
Sbjct: 137 SGCEVFLFDYAKHA 150
Score = 36.6 bits (83), Expect(2) = 2e-51
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RL GHDKE YGL WSPFK
Sbjct: 163 RLVGHDKEGYGLSWSPFK 180
>ref|XP_004289874.1| PREDICTED: WD-40 repeat-containing protein MSI3-like [Fragaria
vesca subsp. vesca]
Length = 405
Score = 187 bits (475), Expect(2) = 6e-51
Identities = 92/133 (69%), Positives = 109/133 (81%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
++VWKKNTPFLYDL+ISHPLEWPSLTV WVP SAP P+ +DPS AVH+L+LGTHTSDD+P
Sbjct: 17 YAVWKKNTPFLYDLIISHPLEWPSLTVHWVP-SAPQPY-SDPSLAVHKLILGTHTSDDYP 74
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
N+LM+ADA+LPA ++ D + +PKVEI+QKI VDGEVNRARCM Q +V AKT
Sbjct: 75 NYLMVADALLPA--SQPNVDAVSDEPTLPKVEISQKIRVDGEVNRARCMLQKPNMVGAKT 132
Query: 491 SGCEVYVFDSTKQ 529
SG EVYVFD TKQ
Sbjct: 133 SGSEVYVFDCTKQ 145
Score = 40.0 bits (92), Expect(2) = 6e-51
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = +3
Query: 531 LRTTTGWL*SGFRLRGHDKERYGLCWSPFK 620
L++ G RLRGHDKE YGL WSPFK
Sbjct: 147 LKSQDGECDPDLRLRGHDKEGYGLSWSPFK 176
>ref|XP_006297756.1| hypothetical protein CARUB_v10013791mg [Capsella rubella]
gi|482566465|gb|EOA30654.1| hypothetical protein
CARUB_v10013791mg [Capsella rubella]
Length = 421
Score = 189 bits (481), Expect(2) = 1e-50
Identities = 90/136 (66%), Positives = 104/136 (76%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
FSVWKKNTPFLYDL+ISHPLEWPSLTV W+PL+ P P+ DP+F VH+L+LGTHTS
Sbjct: 18 FSVWKKNTPFLYDLLISHPLEWPSLTVHWIPLT-PSPYAADPNFGVHKLILGTHTSGGAQ 76
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
+FLM+AD V+P N E G ++ VIPKVEI QKI VDGEVNRARCMPQ +V AKT
Sbjct: 77 DFLMVADVVIPTPNGEPGLGGANQDPVIPKVEIRQKIRVDGEVNRARCMPQKPTLVGAKT 136
Query: 491 SGCEVYVFDSTKQAEN 538
SGCEV +FD K A N
Sbjct: 137 SGCEVLLFDYAKHAAN 152
Score = 37.0 bits (84), Expect(2) = 1e-50
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RL GHDKE YGL WSPFK
Sbjct: 163 RLLGHDKEGYGLSWSPFK 180
>ref|XP_002886076.1| hypothetical protein ARALYDRAFT_480561 [Arabidopsis lyrata subsp.
lyrata] gi|297331916|gb|EFH62335.1| hypothetical protein
ARALYDRAFT_480561 [Arabidopsis lyrata subsp. lyrata]
Length = 415
Score = 186 bits (473), Expect(2) = 1e-49
Identities = 89/134 (66%), Positives = 101/134 (75%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
FSVWKKNTPFLYDL+ISHPLEWPSLTV WVP S P P+ DP F VH+L+LGTHTS
Sbjct: 18 FSVWKKNTPFLYDLLISHPLEWPSLTVHWVP-STPSPYAADPYFGVHKLILGTHTSGSAQ 76
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
+FLM+AD V P N E G ++ +IPKVEI QKI VDGEVNRARCMPQ +V AKT
Sbjct: 77 DFLMVADVVTPTPNGEPGLGGPNQDPIIPKVEIRQKIRVDGEVNRARCMPQKPTLVGAKT 136
Query: 491 SGCEVYVFDSTKQA 532
SGCEV++FD K A
Sbjct: 137 SGCEVFLFDYAKHA 150
Score = 36.6 bits (83), Expect(2) = 1e-49
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RL GHDKE YGL WSPFK
Sbjct: 163 RLVGHDKEGYGLSWSPFK 180
>ref|XP_006283702.1| hypothetical protein CARUB_v10004773mg, partial [Capsella rubella]
gi|482552407|gb|EOA16600.1| hypothetical protein
CARUB_v10004773mg, partial [Capsella rubella]
Length = 458
Score = 189 bits (481), Expect(2) = 4e-49
Identities = 88/129 (68%), Positives = 105/129 (81%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
FSVWK+NTPFLYDL+ISHPLEWPSLT+ WVP S P+P+ DPSFAVH+L+LGTHTS P
Sbjct: 55 FSVWKRNTPFLYDLMISHPLEWPSLTLHWVP-STPIPYAKDPSFAVHKLILGTHTSGGAP 113
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
+FLM+AD V+P +AE GR ++ V+PKVEI QKI VDGEVNRARCMPQ +V AKT
Sbjct: 114 DFLMVADVVIPTPDAEPGLGGRDQDPVVPKVEIKQKIRVDGEVNRARCMPQKPTLVGAKT 173
Query: 491 SGCEVYVFD 517
SG EV++FD
Sbjct: 174 SGSEVFLFD 182
Score = 31.6 bits (70), Expect(2) = 4e-49
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RL GH++E YGL WS FK
Sbjct: 200 RLMGHEEEGYGLAWSSFK 217
>gb|AAM65591.1| putative WD-40 repeat protein, MSI2 [Arabidopsis thaliana]
Length = 415
Score = 183 bits (465), Expect(2) = 9e-49
Identities = 88/134 (65%), Positives = 101/134 (75%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
FSVWKKNTPFLYDL+ISHPLEWPSLT+ WVP S P P+ D F VH+L+LGTHTS
Sbjct: 18 FSVWKKNTPFLYDLLISHPLEWPSLTIHWVP-STPNPYVADSYFGVHKLILGTHTSGSAQ 76
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
+FLM+AD V P NAE G ++ VIPKVEI Q+I VDGEVNRARCMPQ +V AKT
Sbjct: 77 DFLMVADVVTPTPNAEPGIGGANQDPVIPKVEIRQRIRVDGEVNRARCMPQKPTLVGAKT 136
Query: 491 SGCEVYVFDSTKQA 532
SGCEV++FD K A
Sbjct: 137 SGCEVFLFDYAKHA 150
Score = 36.6 bits (83), Expect(2) = 9e-49
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RL GHDKE YGL WSPFK
Sbjct: 163 RLVGHDKEGYGLSWSPFK 180
>gb|ESQ53612.1| hypothetical protein EUTSA_v10025286mg [Eutrema salsugineum]
Length = 425
Score = 187 bits (475), Expect(2) = 2e-48
Identities = 86/134 (64%), Positives = 106/134 (79%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
FSVWK+NTPFLYDL+ISHPLEWPSLT+ WVP S P+P+ DP FAVH+L+LGTHTS P
Sbjct: 19 FSVWKRNTPFLYDLMISHPLEWPSLTLHWVP-STPIPYAKDPYFAVHKLILGTHTSGGAP 77
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
+FLM+AD V+P +AE GR ++ ++PKVEI QKI VDGEVNRARCMPQ +V AKT
Sbjct: 78 DFLMVADVVIPTPDAEPGLGGRDQDPIVPKVEIRQKIRVDGEVNRARCMPQKPTLVGAKT 137
Query: 491 SGCEVYVFDSTKQA 532
SG EV++FD + +
Sbjct: 138 SGSEVFLFDYARHS 151
Score = 31.6 bits (70), Expect(2) = 2e-48
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RL GH++E YGL WS FK
Sbjct: 164 RLMGHEQEGYGLAWSAFK 181
>ref|NP_179269.1| WD-40 repeat-containing protein MSI2 [Arabidopsis thaliana]
gi|3122388|sp|O22468.1|MSI2_ARATH RecName: Full=WD-40
repeat-containing protein MSI2 gi|2394231|gb|AAB70243.1|
WD-40 repeat protein [Arabidopsis thaliana]
gi|4581121|gb|AAD24611.1| putative WD-40 repeat protein,
MSI2 [Arabidopsis thaliana] gi|15983817|gb|AAL10505.1|
At2g16780/T24I21.19 [Arabidopsis thaliana]
gi|330251443|gb|AEC06537.1| WD-40 repeat-containing
protein MSI2 [Arabidopsis thaliana]
Length = 415
Score = 182 bits (461), Expect(2) = 3e-48
Identities = 88/134 (65%), Positives = 100/134 (74%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
FSVWKKNTPFLYDL+ISHPLEWPSLTV WVP S P P+ D F VH+L+LGTHTS
Sbjct: 18 FSVWKKNTPFLYDLLISHPLEWPSLTVHWVP-STPNPYVADSYFGVHKLILGTHTSGSAQ 76
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
+FLM+AD V P NAE G ++ IPKVEI Q+I VDGEVNRARCMPQ +V AKT
Sbjct: 77 DFLMVADVVTPTPNAEPGIGGANQDPFIPKVEIRQRIRVDGEVNRARCMPQKPTLVGAKT 136
Query: 491 SGCEVYVFDSTKQA 532
SGCEV++FD K A
Sbjct: 137 SGCEVFLFDYAKHA 150
Score = 36.6 bits (83), Expect(2) = 3e-48
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RL GHDKE YGL WSPFK
Sbjct: 163 RLVGHDKEGYGLSWSPFK 180
>ref|XP_002278931.1| PREDICTED: WD-40 repeat-containing protein MSI2 [Vitis vinifera]
gi|297744608|emb|CBI37870.3| unnamed protein product
[Vitis vinifera]
Length = 401
Score = 181 bits (460), Expect(2) = 1e-47
Identities = 94/132 (71%), Positives = 109/132 (82%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
F+VWKKNTPFLYDL+ISHPLEWPSLTVQ++P S P+P+ D SF+VH+LVLGTHTSD FP
Sbjct: 15 FTVWKKNTPFLYDLIISHPLEWPSLTVQFLP-SPPLPYALD-SFSVHKLVLGTHTSDGFP 72
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
N+LM+ADA LP RN A + +N IPKVEIT+KI VDGEVNRARCMPQN +VAAKT
Sbjct: 73 NYLMVADAFLP-RNTAAPSE---QNPTIPKVEITKKIHVDGEVNRARCMPQNPDMVAAKT 128
Query: 491 SGCEVYVFDSTK 526
SG EVYVF+ K
Sbjct: 129 SGLEVYVFNCQK 140
Score = 35.0 bits (79), Expect(2) = 1e-47
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RLRGH+KE YGL WS FK
Sbjct: 155 RLRGHEKEGYGLSWSSFK 172
>ref|XP_002867094.1| hypothetical protein ARALYDRAFT_912880 [Arabidopsis lyrata subsp.
lyrata] gi|297312930|gb|EFH43353.1| hypothetical protein
ARALYDRAFT_912880 [Arabidopsis lyrata subsp. lyrata]
Length = 405
Score = 183 bits (465), Expect(2) = 3e-47
Identities = 85/129 (65%), Positives = 102/129 (79%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
FSVWK+NTPFLYDL+ISHPLEWPSLT+ WVP S P+P+ DP FAVH+L+LGTHTS
Sbjct: 19 FSVWKRNTPFLYDLMISHPLEWPSLTLHWVP-STPIPYAKDPYFAVHKLILGTHTSGGAQ 77
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
+FLM+AD V+P +AE GR + ++PKVEI QKI VDGEVNRARCMPQ +V AKT
Sbjct: 78 DFLMVADVVIPTPDAEPGLGGRDQEPIVPKVEIKQKIRVDGEVNRARCMPQKPTLVGAKT 137
Query: 491 SGCEVYVFD 517
SG EV++FD
Sbjct: 138 SGSEVFLFD 146
Score = 31.6 bits (70), Expect(2) = 3e-47
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RL GH++E YGL WS FK
Sbjct: 164 RLMGHEQEGYGLAWSSFK 181
>gb|AAB70244.1| WD-40 repeat protein [Arabidopsis thaliana]
Length = 424
Score = 183 bits (464), Expect(2) = 4e-47
Identities = 84/129 (65%), Positives = 102/129 (79%)
Frame = +2
Query: 131 FSVWKKNTPFLYDLVISHPLEWPSLTVQWVPLSAPVPHPTDPSFAVHRLVLGTHTSDDFP 310
FS+WK+NTPFLYDL+ISHPLEWPSLT+ WVP S P+P+ DP FAVH+L+LGTHTS
Sbjct: 19 FSIWKRNTPFLYDLMISHPLEWPSLTLHWVP-STPIPYSKDPYFAVHKLILGTHTSGGAQ 77
Query: 311 NFLMIADAVLPARNAEAKFDGRPENSVIPKVEITQKILVDGEVNRARCMPQNSAIVAAKT 490
+FLM+AD V+P +AE GR + ++PKVEI QKI VDGEVNRARCMPQ +V AKT
Sbjct: 78 DFLMVADVVIPTPDAEPGLGGRDQEPIVPKVEIKQKIRVDGEVNRARCMPQKPTLVGAKT 137
Query: 491 SGCEVYVFD 517
SG EV++FD
Sbjct: 138 SGSEVFLFD 146
Score = 31.6 bits (70), Expect(2) = 4e-47
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3
Query: 567 RLRGHDKERYGLCWSPFK 620
RL GH++E YGL WS FK
Sbjct: 164 RLMGHEQEGYGLAWSSFK 181