BLASTX nr result

ID: Jatropha_contig00018684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00018684
         (545 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76474.1| hypothetical protein VITISV_016008 [Vitis vinifera]   129   6e-42
emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]   127   2e-40
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   130   3e-37
emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]   132   8e-36
ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800...   122   8e-35
emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera]    96   1e-33
gb|ERN10502.1| hypothetical protein AMTR_s02100p00009220, partia...   147   2e-33
emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera]    99   7e-33
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   111   2e-32
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]     108   1e-31
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|...   108   1e-31
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              103   1e-31
emb|CAN64020.1| hypothetical protein VITISV_008811 [Vitis vinifera]    90   3e-31
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g...   107   4e-31
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         105   9e-30
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  102   2e-29
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja...   105   3e-29
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  102   3e-29
gb|AAQ72730.1| putative integrase [Petunia x hybrida]                 107   4e-29
gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-...   104   6e-29

>emb|CAN76474.1| hypothetical protein VITISV_016008 [Vitis vinifera]
          Length = 519

 Score =  129 bits (323), Expect(3) = 6e-42
 Identities = 61/105 (58%), Positives = 74/105 (70%)
 Frame = +2

Query: 197 RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376
           R +IE            G ++++  P DWVWVH RK RFP   +SKL  RGDGPF VLER
Sbjct: 351 RKHIEKKNEQYATKANKGXRQVLFEPGDWVWVHIRKGRFPTCXQSKLHPRGDGPFQVLER 410

Query: 377 INDNAYKIDLPGEYGVSATFNISDLSPFDMDADLKTNLFKERGDD 511
           INDNAYK+DLPGEY +SAT N+SDLSPFD+  D +TN F+ERG+D
Sbjct: 411 INDNAYKLDLPGEYNISATVNVSDLSPFDVGDDSRTNPFEERGND 455



 Score = 67.8 bits (164), Expect(3) = 6e-42
 Identities = 29/56 (51%), Positives = 39/56 (69%)
 Frame = +3

Query: 3   DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170
           DCL F EFAYNRS+HST+ +SPF++VYGF             NE+++LDGEKK+ +
Sbjct: 287 DCLXFIEFAYNRSVHSTTNFSPFKIVYGFNPLTPLDLLPLPVNEMTSLDGEKKAEM 342



 Score = 20.8 bits (42), Expect(3) = 6e-42
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 154 KKKAELVKSLHE 189
           +KKAE+V  LHE
Sbjct: 337 EKKAEMVXKLHE 348


>emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera]
          Length = 1173

 Score =  127 bits (319), Expect(2) = 2e-40
 Identities = 57/88 (64%), Positives = 72/88 (81%)
 Frame = +2

Query: 248  GRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLERINDNAYKIDLPGEYGVS 427
            GR++++    DWVWVH RKERFP +++SKL  RGDGPF VLERINDNAYK+DL GEY +S
Sbjct: 1044 GRRQVLFESGDWVWVHMRKERFPTRRQSKLHPRGDGPFQVLERINDNAYKLDLLGEYNIS 1103

Query: 428  ATFNISDLSPFDMDADLKTNLFKERGDD 511
            ATF +SDLSPF++  D +TN F+ERG+D
Sbjct: 1104 ATFKVSDLSPFNVGDDSRTNPFEERGND 1131



 Score = 64.7 bits (156), Expect(2) = 2e-40
 Identities = 28/55 (50%), Positives = 37/55 (67%)
 Frame = +3

Query: 3    DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSR 167
            DCLPF EFAYNRS+HST+ +SPFE+VYGF             NE+++LD +K  +
Sbjct: 982  DCLPFTEFAYNRSVHSTTSFSPFEIVYGFNPLTPLDLLPLPVNEMTSLDEKKNEQ 1036


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  130 bits (326), Expect(2) = 3e-37
 Identities = 62/107 (57%), Positives = 76/107 (71%)
 Frame = +2

Query: 191  RARANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVL 370
            + RA IE            GRK ++  P DWVW+H+ K RFPNQ+KSKL  RGDGPF VL
Sbjct: 1175 KVRAQIEKKNEQYAQKANKGRKAIIFKPGDWVWIHYSKNRFPNQRKSKLMPRGDGPFQVL 1234

Query: 371  ERINDNAYKIDLPGEYGVSATFNISDLSPFDMDADLKTNLFKERGDD 511
            ERINDNAYK+DL GE+ VS+TFN++DL+PFD  +D  TNLF+E  DD
Sbjct: 1235 ERINDNAYKLDLRGEHSVSSTFNVADLAPFDF-SDSGTNLFQEGEDD 1280



 Score = 50.8 bits (120), Expect(2) = 3e-37
 Identities = 23/55 (41%), Positives = 32/55 (58%)
 Frame = +3

Query: 3    DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSR 167
            + LP+ EFAYNR+IHST+  SPFE+ YGF             N+   +D  KK++
Sbjct: 1113 ESLPYVEFAYNRAIHSTTNMSPFEVAYGFNPLTPLDLIPLHVNDKECVDAAKKAQ 1167


>emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]
          Length = 1281

 Score =  132 bits (331), Expect(2) = 8e-36
 Identities = 61/105 (58%), Positives = 75/105 (71%)
 Frame = +2

Query: 197  RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376
            R +IE            G  +++  P DWVWVH RKERFP ++ SKL  RGDGPF VLER
Sbjct: 1134 RKHIEKKNEQYVSKANKGXXQVLFEPGDWVWVHMRKERFPTRRXSKLHPRGDGPFQVLER 1193

Query: 377  INDNAYKIDLPGEYGVSATFNISDLSPFDMDADLKTNLFKERGDD 511
            INDNAYK+D+PGEY +SATFN+SDLSPFD+  D  TN F+E+G+D
Sbjct: 1194 INDNAYKLDIPGEYNISATFNVSDLSPFDVGDDSXTNPFEEKGND 1238



 Score = 44.3 bits (103), Expect(2) = 8e-36
 Identities = 20/40 (50%), Positives = 26/40 (65%)
 Frame = +3

Query: 42   IHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKK 161
            +HST+ +SPFE+VYGF             NE+ +LDGEKK
Sbjct: 1083 VHSTTNFSPFEIVYGFNPLTSLDLLPLXVNEMXSLDGEKK 1122


>ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800881 [Glycine max]
          Length = 1746

 Score =  122 bits (305), Expect(3) = 8e-35
 Identities = 56/73 (76%), Positives = 62/73 (84%)
 Frame = +2

Query: 251  RKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLERINDNAYKIDLPGEYGVSA 430
            RKK+VL P DWVWVH RKERFP  +KSKL  RGDGPF VLE+INDNAYKIDLP EY VSA
Sbjct: 1401 RKKVVLEPGDWVWVHLRKERFPKHRKSKLQPRGDGPFQVLEKINDNAYKIDLPSEYNVSA 1460

Query: 431  TFNISDLSPFDMD 469
            TFN+SDLS FD++
Sbjct: 1461 TFNVSDLSLFDVE 1473



 Score = 50.1 bits (118), Expect(3) = 8e-35
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = +3

Query: 6    CLPFFEFAYNRSIHSTSGYSPFELVYGF 89
            CLP  EFAYNR++HST+  SPFE+VYGF
Sbjct: 1319 CLPHVEFAYNRAVHSTTNCSPFEIVYGF 1346



 Score = 21.2 bits (43), Expect(3) = 8e-35
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 160  KAELVKSLHEKS*SQHRKEEQAIC**SQQRQEKV 261
            KAE VK LHE+   Q  K+  +    + + ++KV
Sbjct: 1371 KAEYVKKLHEQVKVQIEKKNASYARQANKSRKKV 1404


>emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera]
          Length = 893

 Score = 95.5 bits (236), Expect(3) = 1e-33
 Identities = 50/105 (47%), Positives = 61/105 (58%)
 Frame = +2

Query: 197 RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376
           R +IE            GR++++  P DWVWVH RK RFP  K+SKL  RGDGPF VLER
Sbjct: 196 RKHIEKKNEQYATKANKGRRQVLFEPGDWVWVHIRKGRFPTCKQSKLHPRGDGPFQVLER 255

Query: 377 INDNAYKIDLPGEYGVSATFNISDLSPFDMDADLKTNLFKERGDD 511
           INDNAYK+DLPG+                   D +TN F+ERG+D
Sbjct: 256 INDNAYKLDLPGD-------------------DSRTNPFEERGND 281



 Score = 70.9 bits (172), Expect(3) = 1e-33
 Identities = 30/56 (53%), Positives = 40/56 (71%)
 Frame = +3

Query: 3   DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170
           DCLPF EFAYNRS+HST+ +SPF++VYGF             NE+++LDGEKK+ +
Sbjct: 132 DCLPFIEFAYNRSVHSTTNFSPFKIVYGFNPLTPLDLLPLPVNEMTSLDGEKKAEM 187



 Score = 23.1 bits (48), Expect(3) = 1e-33
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +1

Query: 154 KKKAELVKSLHE 189
           +KKAE+VK LHE
Sbjct: 182 EKKAEMVKKLHE 193


>gb|ERN10502.1| hypothetical protein AMTR_s02100p00009220, partial [Amborella
           trichopoda]
          Length = 183

 Score =  147 bits (370), Expect = 2e-33
 Identities = 73/121 (60%), Positives = 83/121 (68%)
 Frame = +2

Query: 155 KKKQNW*SLYMRRARANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSK 334
           +KK  +   +  RAR NIE            GR K V  P DWVW+H RKERFP Q++SK
Sbjct: 7   EKKAEFVKKFHERARLNIERRTEQYLKQANKGRHKQVFEPGDWVWLHMRKERFPTQRRSK 66

Query: 335 LDARGDGPFLVLERINDNAYKIDLPGEYGVSATFNISDLSPFDMDADLKTNLFKERGDDT 514
           L  RGDGPF VLERINDNAYK+DLPGEY VSATFN+SDLSPFD   DL+TN  KE G+D 
Sbjct: 67  LLPRGDGPFQVLERINDNAYKLDLPGEYNVSATFNVSDLSPFDTGEDLRTNPSKEGGNDE 126

Query: 515 D 517
           D
Sbjct: 127 D 127


>emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera]
          Length = 750

 Score = 99.4 bits (246), Expect(3) = 7e-33
 Identities = 47/88 (53%), Positives = 61/88 (69%)
 Frame = +2

Query: 248 GRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLERINDNAYKIDLPGEYGVS 427
           GR++++  P DWVWVH RKERFP  + SKL  RGDG F           ++DLPGEY +S
Sbjct: 599 GRRQVIFEPGDWVWVHMRKERFPTCRWSKLHPRGDGLF-----------QLDLPGEYNIS 647

Query: 428 ATFNISDLSPFDMDADLKTNLFKERGDD 511
           ATFN+SDLSPFD+  D +TN F+E+ +D
Sbjct: 648 ATFNVSDLSPFDVGDDSRTNPFEEKEND 675



 Score = 65.9 bits (159), Expect(3) = 7e-33
 Identities = 29/56 (51%), Positives = 38/56 (67%)
 Frame = +3

Query: 3   DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170
           DCL F EFAYNRS+HS +  SPFE+VYGF             NE+++LDGEKK+++
Sbjct: 518 DCLSFIEFAYNRSVHSITNSSPFEIVYGFNPLTPLDLLPLQVNEMTSLDGEKKAKM 573



 Score = 21.6 bits (44), Expect(3) = 7e-33
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 154 KKKAELVKSLHE 189
           +KKA++VK LHE
Sbjct: 568 EKKAKMVKKLHE 579


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  111 bits (278), Expect(2) = 2e-32
 Identities = 59/121 (48%), Positives = 75/121 (61%), Gaps = 9/121 (7%)
 Frame = +2

Query: 197  RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376
            + NIE            GRK +V  P D VW+H RK+RFPN +KSKL  R DGPF VLE+
Sbjct: 1498 KENIERMNAKYKLARDKGRKHVVFAPGDLVWLHLRKDRFPNLRKSKLMPRADGPFKVLEK 1557

Query: 377  INDNAYKIDLPGEYGVSATFNISDLSPFDMDAD---LKTNLFKERGDDTD------PLSP 529
            INDNAYK++LP ++GVS TFNI+DL P+  + D    +T  F+E  DD D      P +P
Sbjct: 1558 INDNAYKLELPADFGVSPTFNIADLKPYLGEEDELPSRTTSFQEGEDDEDINTIVTPTAP 1617

Query: 530  T 532
            T
Sbjct: 1618 T 1618



 Score = 53.5 bits (127), Expect(2) = 2e-32
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = +3

Query: 3    DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170
            +CLP  EFAYNRS+HST+   PFE+VYGF             +E  N D +++S +
Sbjct: 1434 ECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPLPSSEKVNFDAKERSEL 1489


>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1713

 Score =  108 bits (270), Expect(2) = 1e-31
 Identities = 52/92 (56%), Positives = 67/92 (72%), Gaps = 3/92 (3%)
 Frame = +2

Query: 251  RKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLERINDNAYKIDLPGEYGVSA 430
            RKK+   P D VWVH RK+RFP ++KSKL  RGDGPF VL +INDNAYKI+LP +YGVS+
Sbjct: 1475 RKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSS 1534

Query: 431  TFNISDLSPF---DMDADLKTNLFKERGDDTD 517
            TFN++DL+PF   +     ++  F+E  DD D
Sbjct: 1535 TFNVADLTPFFGLEDSESSRSTPFQEGEDDED 1566



 Score = 53.9 bits (128), Expect(2) = 1e-31
 Identities = 23/54 (42%), Positives = 33/54 (61%)
 Frame = +3

Query: 3    DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKS 164
            +CLP  EFAYNR++HST+   PFE+VYGFK             E S+++  K++
Sbjct: 1393 ECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRA 1446


>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
           gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 681

 Score =  108 bits (270), Expect(2) = 1e-31
 Identities = 52/92 (56%), Positives = 67/92 (72%), Gaps = 3/92 (3%)
 Frame = +2

Query: 251 RKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLERINDNAYKIDLPGEYGVSA 430
           RKK+   P D VWVH RK+RFP ++KSKL  RGDGPF VL +INDNAYKI+LP +YGVS+
Sbjct: 443 RKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSS 502

Query: 431 TFNISDLSPF---DMDADLKTNLFKERGDDTD 517
           TFN++DL+PF   +     ++  F+E  DD D
Sbjct: 503 TFNVADLTPFFGLEDSESSRSTPFQEGEDDED 534



 Score = 53.9 bits (128), Expect(2) = 1e-31
 Identities = 23/54 (42%), Positives = 33/54 (61%)
 Frame = +3

Query: 3   DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKS 164
           +CLP  EFAYNR++HST+   PFE+VYGFK             E S+++  K++
Sbjct: 361 ECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRA 414


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  103 bits (258), Expect(2) = 1e-31
 Identities = 55/120 (45%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
 Frame = +2

Query: 155  KKKQNW*SLYMRRARANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSK 334
            KKK         +A+ NIE             RK+++    D VW+H RKERFP ++KSK
Sbjct: 1631 KKKAELVQQIHEQAKKNIEEKTKQYAKHANKSRKEVIFNEGDLVWIHLRKERFPKERKSK 1690

Query: 335  LDARGDGPFLVLERINDNAYKIDLPGEYGVSATFNISDLSPFDMD-ADLKTNLFKERGDD 511
            L +R DGPF VL+RIN+NAY +DL G+Y VS +FN++DL PF  D  DL++N F+   DD
Sbjct: 1691 LMSRIDGPFKVLKRINNNAYSLDLQGKYNVSNSFNVADLFPFIADNTDLRSNPFQLGEDD 1750



 Score = 58.2 bits (139), Expect(2) = 1e-31
 Identities = 26/56 (46%), Positives = 35/56 (62%)
 Frame = +3

Query: 3    DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170
            DCLP  EFAYN S+HS S +SPF++VYGF             +E  +LDG+KK+ +
Sbjct: 1581 DCLPHVEFAYNHSMHSASKFSPFQIVYGFNPTTPLDLMPLPLSERVSLDGKKKAEL 1636


>emb|CAN64020.1| hypothetical protein VITISV_008811 [Vitis vinifera]
          Length = 1089

 Score = 89.7 bits (221), Expect(3) = 3e-31
 Identities = 47/105 (44%), Positives = 58/105 (55%)
 Frame = +2

Query: 197  RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376
            R +IE            GR++++  P DWVWVH RKERFP   +SKL   GDGPF V ER
Sbjct: 940  RKHIEMKNEQYATKANKGRRQVLFEPGDWVWVHMRKERFPTHGRSKLHPXGDGPFQVPER 999

Query: 377  INDNAYKIDLPGEYGVSATFNISDLSPFDMDADLKTNLFKERGDD 511
            INDNAYK+DLPG+                   D + N F+ERG+D
Sbjct: 1000 INDNAYKLDLPGD-------------------DSRMNPFEERGND 1025



 Score = 69.7 bits (169), Expect(3) = 3e-31
 Identities = 29/56 (51%), Positives = 40/56 (71%)
 Frame = +3

Query: 3    DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170
            DCLPF EF+YNRS+HST+ +SPF++VYGF             NE+++LDGEKK+ +
Sbjct: 876  DCLPFIEFSYNRSVHSTTNFSPFKIVYGFNPLTPLDLLLLPVNEMTSLDGEKKAEM 931



 Score = 21.9 bits (45), Expect(3) = 3e-31
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 154 KKKAELVKSLHE 189
           +KKAE+VK LH+
Sbjct: 926 EKKAEMVKKLHD 937


>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
           gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
           Japonica Group]
          Length = 681

 Score =  107 bits (268), Expect(2) = 4e-31
 Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 3/92 (3%)
 Frame = +2

Query: 251 RKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLERINDNAYKIDLPGEYGVSA 430
           RKK+   P D VWVH RK+RFP ++KSKL  RGDGPF VL +INDNAYKI+LP +YGVS 
Sbjct: 443 RKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSP 502

Query: 431 TFNISDLSPF---DMDADLKTNLFKERGDDTD 517
           TFN++DL+PF   +     ++  F+E  DD D
Sbjct: 503 TFNVADLTPFFGLEDSESSRSTPFQEGEDDED 534



 Score = 52.8 bits (125), Expect(2) = 4e-31
 Identities = 23/52 (44%), Positives = 31/52 (59%)
 Frame = +3

Query: 3   DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEK 158
           +CLP  EFAYNR++HST+   PFE+VYGFK             E S+++  K
Sbjct: 361 ECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLAPIDLLPLPLQERSDMEASK 412


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  105 bits (263), Expect(2) = 9e-30
 Identities = 52/110 (47%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
 Frame = +2

Query: 197  RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376
            + NIE            GRK++   P D VW+H RKERFP  +KSKL  R DGPF VLE+
Sbjct: 1457 KENIERMNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVLEK 1516

Query: 377  INDNAYKIDLPGEYGVSATFNISDLSPF---DMDADLKTNLFKERGDDTD 517
            INDNAY++DLP ++GVS TFNI+DL P+   +++ + +T   +E  +D D
Sbjct: 1517 INDNAYRLDLPADFGVSPTFNIADLKPYLGEEVELESRTTQMQEGENDED 1566



 Score = 50.1 bits (118), Expect(2) = 9e-30
 Identities = 22/56 (39%), Positives = 31/56 (55%)
 Frame = +3

Query: 3    DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170
            DCLP  EFAYNRS+HST+   PF++VYG              +E  N D  +++ +
Sbjct: 1393 DCLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAEL 1448


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  102 bits (254), Expect(2) = 2e-29
 Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
 Frame = +2

Query: 197  RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376
            + NIE            GRK +V  P D VW+H RK+RFP+ +KSKL  R  GPF VLE+
Sbjct: 1513 KENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEK 1572

Query: 377  INDNAYKIDLPGEYGVSATFNISDLSPFDMDAD---LKTNLFKERGDDTD 517
            INDNAY+++LP ++GVS TFNI+DL P+  + D    +T   +E  DD D
Sbjct: 1573 INDNAYRLELPADFGVSPTFNIADLKPYLGEEDELPSRTTSVQEGEDDED 1622



 Score = 52.4 bits (124), Expect(2) = 2e-29
 Identities = 23/56 (41%), Positives = 33/56 (58%)
 Frame = +3

Query: 3    DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170
            +CLP  EFAYNRS+HST+   PFE+VYGF             +E  N D ++++ +
Sbjct: 1449 ECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAEL 1504


>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431012|gb|AAP52850.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2447

 Score =  105 bits (262), Expect(2) = 3e-29
 Identities = 52/110 (47%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
 Frame = +2

Query: 197  RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376
            + NIE            GR++L   P D VW+H RKERFP+ +KSKL  R DGPF VL +
Sbjct: 1454 KENIERMNAKYKFAGDKGRRELTFEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLAK 1513

Query: 377  INDNAYKIDLPGEYGVSATFNISDLSPF---DMDADLKTNLFKERGDDTD 517
            IN+NAYKIDLP ++GVS TFN++DL P+   + + + +T   +E  DD D
Sbjct: 1514 INENAYKIDLPADFGVSPTFNVADLKPYLGEEDELESRTTQMQEGEDDED 1563



 Score = 48.9 bits (115), Expect(2) = 3e-29
 Identities = 21/56 (37%), Positives = 32/56 (57%)
 Frame = +3

Query: 3    DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170
            +CLP  EFAYNRS+HST+   PF++VYG              +E  N D ++++ +
Sbjct: 1390 ECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1445


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  102 bits (253), Expect(2) = 3e-29
 Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
 Frame = +2

Query: 197  RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376
            + NIE            GRK +V  P D VW+H RK+RFP+ +KSKL  R  GPF VLE+
Sbjct: 1510 KENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEK 1569

Query: 377  INDNAYKIDLPGEYGVSATFNISDLSPFDMDAD---LKTNLFKERGDDTD 517
            INDNAY+++LP ++GVS TFNI+DL P+  + D    +T   +E  DD D
Sbjct: 1570 INDNAYRLELPXDFGVSPTFNIADLKPYLGEEDELPSRTTSVQEGEDDED 1619



 Score = 52.4 bits (124), Expect(2) = 3e-29
 Identities = 23/56 (41%), Positives = 33/56 (58%)
 Frame = +3

Query: 3    DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170
            +CLP  EFAYNRS+HST+   PFE+VYGF             +E  N D ++++ +
Sbjct: 1446 ECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAEL 1501


>gb|AAQ72730.1| putative integrase [Petunia x hybrida]
          Length = 437

 Score =  107 bits (267), Expect(2) = 4e-29
 Identities = 54/109 (49%), Positives = 70/109 (64%)
 Frame = +2

Query: 191 RARANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVL 370
           +A+ N+E            GRKK+ L   D+VWVHFRKERFPN +K KL  RGDGPF VL
Sbjct: 226 KAKKNLEESYAKVAAKKNKGRKKVELKKGDYVWVHFRKERFPNLRKGKLAPRGDGPFQVL 285

Query: 371 ERINDNAYKIDLPGEYGVSATFNISDLSPFDMDADLKTNLFKERGDDTD 517
            +IN+NAY +DLP EY VS TFN+SDL P ++  +   N  +E  +D +
Sbjct: 286 SKINNNAYVVDLPSEYQVSNTFNVSDLVPLNVGNEEVVNDDEEVVNDDE 334



 Score = 46.6 bits (109), Expect(2) = 4e-29
 Identities = 21/55 (38%), Positives = 30/55 (54%)
 Frame = +3

Query: 3   DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSR 167
           D LP  EFAYNR++HS  G +PFE VYGF               + N +G+ +++
Sbjct: 164 DRLPMMEFAYNRTLHSMIGMTPFECVYGFNPLIPLDLTPLPREMVVNFEGKARAK 218


>gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77550404|gb|ABA93201.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1297

 Score =  104 bits (259), Expect(2) = 6e-29
 Identities = 52/110 (47%), Positives = 70/110 (63%), Gaps = 3/110 (2%)
 Frame = +2

Query: 197  RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376
            + NIE            GR++L   P D VW+H RKERFP+ +KSKL  R DGPF VL +
Sbjct: 1122 KENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLAK 1181

Query: 377  INDNAYKIDLPGEYGVSATFNISDLSPF---DMDADLKTNLFKERGDDTD 517
            IN+NAYKIDLP ++GVS TFN++DL P+   + + + +T   +E  DD D
Sbjct: 1182 INENAYKIDLPADFGVSPTFNVADLKPYLGEEDELESRTTQMQEGEDDED 1231



 Score = 48.9 bits (115), Expect(2) = 6e-29
 Identities = 21/56 (37%), Positives = 32/56 (57%)
 Frame = +3

Query: 3    DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170
            +CLP  EFAYNRS+HST+   PF++VYG              +E  N D ++++ +
Sbjct: 1058 ECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1113


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