BLASTX nr result
ID: Jatropha_contig00018684
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Jatropha_contig00018684 (545 letters) Database: NCBI-nr (updated 2014/02/11) 35,149,712 sequences; 12,374,887,350 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN76474.1| hypothetical protein VITISV_016008 [Vitis vinifera] 129 6e-42 emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] 127 2e-40 gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 130 3e-37 emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera] 132 8e-36 ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800... 122 8e-35 emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera] 96 1e-33 gb|ERN10502.1| hypothetical protein AMTR_s02100p00009220, partia... 147 2e-33 emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera] 99 7e-33 gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 111 2e-32 gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 108 1e-31 gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 108 1e-31 gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 103 1e-31 emb|CAN64020.1| hypothetical protein VITISV_008811 [Vitis vinifera] 90 3e-31 ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 107 4e-31 gb|AAM94350.1| gag-pol polyprotein [Zea mays] 105 9e-30 gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 102 2e-29 gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 105 3e-29 gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 102 3e-29 gb|AAQ72730.1| putative integrase [Petunia x hybrida] 107 4e-29 gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-... 104 6e-29 >emb|CAN76474.1| hypothetical protein VITISV_016008 [Vitis vinifera] Length = 519 Score = 129 bits (323), Expect(3) = 6e-42 Identities = 61/105 (58%), Positives = 74/105 (70%) Frame = +2 Query: 197 RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376 R +IE G ++++ P DWVWVH RK RFP +SKL RGDGPF VLER Sbjct: 351 RKHIEKKNEQYATKANKGXRQVLFEPGDWVWVHIRKGRFPTCXQSKLHPRGDGPFQVLER 410 Query: 377 INDNAYKIDLPGEYGVSATFNISDLSPFDMDADLKTNLFKERGDD 511 INDNAYK+DLPGEY +SAT N+SDLSPFD+ D +TN F+ERG+D Sbjct: 411 INDNAYKLDLPGEYNISATVNVSDLSPFDVGDDSRTNPFEERGND 455 Score = 67.8 bits (164), Expect(3) = 6e-42 Identities = 29/56 (51%), Positives = 39/56 (69%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170 DCL F EFAYNRS+HST+ +SPF++VYGF NE+++LDGEKK+ + Sbjct: 287 DCLXFIEFAYNRSVHSTTNFSPFKIVYGFNPLTPLDLLPLPVNEMTSLDGEKKAEM 342 Score = 20.8 bits (42), Expect(3) = 6e-42 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = +1 Query: 154 KKKAELVKSLHE 189 +KKAE+V LHE Sbjct: 337 EKKAEMVXKLHE 348 >emb|CAN77900.1| hypothetical protein VITISV_037350 [Vitis vinifera] Length = 1173 Score = 127 bits (319), Expect(2) = 2e-40 Identities = 57/88 (64%), Positives = 72/88 (81%) Frame = +2 Query: 248 GRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLERINDNAYKIDLPGEYGVS 427 GR++++ DWVWVH RKERFP +++SKL RGDGPF VLERINDNAYK+DL GEY +S Sbjct: 1044 GRRQVLFESGDWVWVHMRKERFPTRRQSKLHPRGDGPFQVLERINDNAYKLDLLGEYNIS 1103 Query: 428 ATFNISDLSPFDMDADLKTNLFKERGDD 511 ATF +SDLSPF++ D +TN F+ERG+D Sbjct: 1104 ATFKVSDLSPFNVGDDSRTNPFEERGND 1131 Score = 64.7 bits (156), Expect(2) = 2e-40 Identities = 28/55 (50%), Positives = 37/55 (67%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSR 167 DCLPF EFAYNRS+HST+ +SPFE+VYGF NE+++LD +K + Sbjct: 982 DCLPFTEFAYNRSVHSTTSFSPFEIVYGFNPLTPLDLLPLPVNEMTSLDEKKNEQ 1036 >gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas] Length = 1358 Score = 130 bits (326), Expect(2) = 3e-37 Identities = 62/107 (57%), Positives = 76/107 (71%) Frame = +2 Query: 191 RARANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVL 370 + RA IE GRK ++ P DWVW+H+ K RFPNQ+KSKL RGDGPF VL Sbjct: 1175 KVRAQIEKKNEQYAQKANKGRKAIIFKPGDWVWIHYSKNRFPNQRKSKLMPRGDGPFQVL 1234 Query: 371 ERINDNAYKIDLPGEYGVSATFNISDLSPFDMDADLKTNLFKERGDD 511 ERINDNAYK+DL GE+ VS+TFN++DL+PFD +D TNLF+E DD Sbjct: 1235 ERINDNAYKLDLRGEHSVSSTFNVADLAPFDF-SDSGTNLFQEGEDD 1280 Score = 50.8 bits (120), Expect(2) = 3e-37 Identities = 23/55 (41%), Positives = 32/55 (58%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSR 167 + LP+ EFAYNR+IHST+ SPFE+ YGF N+ +D KK++ Sbjct: 1113 ESLPYVEFAYNRAIHSTTNMSPFEVAYGFNPLTPLDLIPLHVNDKECVDAAKKAQ 1167 >emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera] Length = 1281 Score = 132 bits (331), Expect(2) = 8e-36 Identities = 61/105 (58%), Positives = 75/105 (71%) Frame = +2 Query: 197 RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376 R +IE G +++ P DWVWVH RKERFP ++ SKL RGDGPF VLER Sbjct: 1134 RKHIEKKNEQYVSKANKGXXQVLFEPGDWVWVHMRKERFPTRRXSKLHPRGDGPFQVLER 1193 Query: 377 INDNAYKIDLPGEYGVSATFNISDLSPFDMDADLKTNLFKERGDD 511 INDNAYK+D+PGEY +SATFN+SDLSPFD+ D TN F+E+G+D Sbjct: 1194 INDNAYKLDIPGEYNISATFNVSDLSPFDVGDDSXTNPFEEKGND 1238 Score = 44.3 bits (103), Expect(2) = 8e-36 Identities = 20/40 (50%), Positives = 26/40 (65%) Frame = +3 Query: 42 IHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKK 161 +HST+ +SPFE+VYGF NE+ +LDGEKK Sbjct: 1083 VHSTTNFSPFEIVYGFNPLTSLDLLPLXVNEMXSLDGEKK 1122 >ref|XP_003530517.1| PREDICTED: uncharacterized protein LOC100800881 [Glycine max] Length = 1746 Score = 122 bits (305), Expect(3) = 8e-35 Identities = 56/73 (76%), Positives = 62/73 (84%) Frame = +2 Query: 251 RKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLERINDNAYKIDLPGEYGVSA 430 RKK+VL P DWVWVH RKERFP +KSKL RGDGPF VLE+INDNAYKIDLP EY VSA Sbjct: 1401 RKKVVLEPGDWVWVHLRKERFPKHRKSKLQPRGDGPFQVLEKINDNAYKIDLPSEYNVSA 1460 Query: 431 TFNISDLSPFDMD 469 TFN+SDLS FD++ Sbjct: 1461 TFNVSDLSLFDVE 1473 Score = 50.1 bits (118), Expect(3) = 8e-35 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = +3 Query: 6 CLPFFEFAYNRSIHSTSGYSPFELVYGF 89 CLP EFAYNR++HST+ SPFE+VYGF Sbjct: 1319 CLPHVEFAYNRAVHSTTNCSPFEIVYGF 1346 Score = 21.2 bits (43), Expect(3) = 8e-35 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +1 Query: 160 KAELVKSLHEKS*SQHRKEEQAIC**SQQRQEKV 261 KAE VK LHE+ Q K+ + + + ++KV Sbjct: 1371 KAEYVKKLHEQVKVQIEKKNASYARQANKSRKKV 1404 >emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera] Length = 893 Score = 95.5 bits (236), Expect(3) = 1e-33 Identities = 50/105 (47%), Positives = 61/105 (58%) Frame = +2 Query: 197 RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376 R +IE GR++++ P DWVWVH RK RFP K+SKL RGDGPF VLER Sbjct: 196 RKHIEKKNEQYATKANKGRRQVLFEPGDWVWVHIRKGRFPTCKQSKLHPRGDGPFQVLER 255 Query: 377 INDNAYKIDLPGEYGVSATFNISDLSPFDMDADLKTNLFKERGDD 511 INDNAYK+DLPG+ D +TN F+ERG+D Sbjct: 256 INDNAYKLDLPGD-------------------DSRTNPFEERGND 281 Score = 70.9 bits (172), Expect(3) = 1e-33 Identities = 30/56 (53%), Positives = 40/56 (71%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170 DCLPF EFAYNRS+HST+ +SPF++VYGF NE+++LDGEKK+ + Sbjct: 132 DCLPFIEFAYNRSVHSTTNFSPFKIVYGFNPLTPLDLLPLPVNEMTSLDGEKKAEM 187 Score = 23.1 bits (48), Expect(3) = 1e-33 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = +1 Query: 154 KKKAELVKSLHE 189 +KKAE+VK LHE Sbjct: 182 EKKAEMVKKLHE 193 >gb|ERN10502.1| hypothetical protein AMTR_s02100p00009220, partial [Amborella trichopoda] Length = 183 Score = 147 bits (370), Expect = 2e-33 Identities = 73/121 (60%), Positives = 83/121 (68%) Frame = +2 Query: 155 KKKQNW*SLYMRRARANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSK 334 +KK + + RAR NIE GR K V P DWVW+H RKERFP Q++SK Sbjct: 7 EKKAEFVKKFHERARLNIERRTEQYLKQANKGRHKQVFEPGDWVWLHMRKERFPTQRRSK 66 Query: 335 LDARGDGPFLVLERINDNAYKIDLPGEYGVSATFNISDLSPFDMDADLKTNLFKERGDDT 514 L RGDGPF VLERINDNAYK+DLPGEY VSATFN+SDLSPFD DL+TN KE G+D Sbjct: 67 LLPRGDGPFQVLERINDNAYKLDLPGEYNVSATFNVSDLSPFDTGEDLRTNPSKEGGNDE 126 Query: 515 D 517 D Sbjct: 127 D 127 >emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera] Length = 750 Score = 99.4 bits (246), Expect(3) = 7e-33 Identities = 47/88 (53%), Positives = 61/88 (69%) Frame = +2 Query: 248 GRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLERINDNAYKIDLPGEYGVS 427 GR++++ P DWVWVH RKERFP + SKL RGDG F ++DLPGEY +S Sbjct: 599 GRRQVIFEPGDWVWVHMRKERFPTCRWSKLHPRGDGLF-----------QLDLPGEYNIS 647 Query: 428 ATFNISDLSPFDMDADLKTNLFKERGDD 511 ATFN+SDLSPFD+ D +TN F+E+ +D Sbjct: 648 ATFNVSDLSPFDVGDDSRTNPFEEKEND 675 Score = 65.9 bits (159), Expect(3) = 7e-33 Identities = 29/56 (51%), Positives = 38/56 (67%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170 DCL F EFAYNRS+HS + SPFE+VYGF NE+++LDGEKK+++ Sbjct: 518 DCLSFIEFAYNRSVHSITNSSPFEIVYGFNPLTPLDLLPLQVNEMTSLDGEKKAKM 573 Score = 21.6 bits (44), Expect(3) = 7e-33 Identities = 8/12 (66%), Positives = 11/12 (91%) Frame = +1 Query: 154 KKKAELVKSLHE 189 +KKA++VK LHE Sbjct: 568 EKKAKMVKKLHE 579 >gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp. aegilopoides] Length = 1704 Score = 111 bits (278), Expect(2) = 2e-32 Identities = 59/121 (48%), Positives = 75/121 (61%), Gaps = 9/121 (7%) Frame = +2 Query: 197 RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376 + NIE GRK +V P D VW+H RK+RFPN +KSKL R DGPF VLE+ Sbjct: 1498 KENIERMNAKYKLARDKGRKHVVFAPGDLVWLHLRKDRFPNLRKSKLMPRADGPFKVLEK 1557 Query: 377 INDNAYKIDLPGEYGVSATFNISDLSPFDMDAD---LKTNLFKERGDDTD------PLSP 529 INDNAYK++LP ++GVS TFNI+DL P+ + D +T F+E DD D P +P Sbjct: 1558 INDNAYKLELPADFGVSPTFNIADLKPYLGEEDELPSRTTSFQEGEDDEDINTIVTPTAP 1617 Query: 530 T 532 T Sbjct: 1618 T 1618 Score = 53.5 bits (127), Expect(2) = 2e-32 Identities = 24/56 (42%), Positives = 33/56 (58%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170 +CLP EFAYNRS+HST+ PFE+VYGF +E N D +++S + Sbjct: 1434 ECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPLPSSEKVNFDAKERSEL 1489 >gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1713 Score = 108 bits (270), Expect(2) = 1e-31 Identities = 52/92 (56%), Positives = 67/92 (72%), Gaps = 3/92 (3%) Frame = +2 Query: 251 RKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLERINDNAYKIDLPGEYGVSA 430 RKK+ P D VWVH RK+RFP ++KSKL RGDGPF VL +INDNAYKI+LP +YGVS+ Sbjct: 1475 RKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSS 1534 Query: 431 TFNISDLSPF---DMDADLKTNLFKERGDDTD 517 TFN++DL+PF + ++ F+E DD D Sbjct: 1535 TFNVADLTPFFGLEDSESSRSTPFQEGEDDED 1566 Score = 53.9 bits (128), Expect(2) = 1e-31 Identities = 23/54 (42%), Positives = 33/54 (61%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKS 164 +CLP EFAYNR++HST+ PFE+VYGFK E S+++ K++ Sbjct: 1393 ECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRA 1446 >gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza sativa Japonica Group] Length = 681 Score = 108 bits (270), Expect(2) = 1e-31 Identities = 52/92 (56%), Positives = 67/92 (72%), Gaps = 3/92 (3%) Frame = +2 Query: 251 RKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLERINDNAYKIDLPGEYGVSA 430 RKK+ P D VWVH RK+RFP ++KSKL RGDGPF VL +INDNAYKI+LP +YGVS+ Sbjct: 443 RKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSS 502 Query: 431 TFNISDLSPF---DMDADLKTNLFKERGDDTD 517 TFN++DL+PF + ++ F+E DD D Sbjct: 503 TFNVADLTPFFGLEDSESSRSTPFQEGEDDED 534 Score = 53.9 bits (128), Expect(2) = 1e-31 Identities = 23/54 (42%), Positives = 33/54 (61%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKS 164 +CLP EFAYNR++HST+ PFE+VYGFK E S+++ K++ Sbjct: 361 ECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRA 414 >gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] Length = 1887 Score = 103 bits (258), Expect(2) = 1e-31 Identities = 55/120 (45%), Positives = 74/120 (61%), Gaps = 1/120 (0%) Frame = +2 Query: 155 KKKQNW*SLYMRRARANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSK 334 KKK +A+ NIE RK+++ D VW+H RKERFP ++KSK Sbjct: 1631 KKKAELVQQIHEQAKKNIEEKTKQYAKHANKSRKEVIFNEGDLVWIHLRKERFPKERKSK 1690 Query: 335 LDARGDGPFLVLERINDNAYKIDLPGEYGVSATFNISDLSPFDMD-ADLKTNLFKERGDD 511 L +R DGPF VL+RIN+NAY +DL G+Y VS +FN++DL PF D DL++N F+ DD Sbjct: 1691 LMSRIDGPFKVLKRINNNAYSLDLQGKYNVSNSFNVADLFPFIADNTDLRSNPFQLGEDD 1750 Score = 58.2 bits (139), Expect(2) = 1e-31 Identities = 26/56 (46%), Positives = 35/56 (62%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170 DCLP EFAYN S+HS S +SPF++VYGF +E +LDG+KK+ + Sbjct: 1581 DCLPHVEFAYNHSMHSASKFSPFQIVYGFNPTTPLDLMPLPLSERVSLDGKKKAEL 1636 >emb|CAN64020.1| hypothetical protein VITISV_008811 [Vitis vinifera] Length = 1089 Score = 89.7 bits (221), Expect(3) = 3e-31 Identities = 47/105 (44%), Positives = 58/105 (55%) Frame = +2 Query: 197 RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376 R +IE GR++++ P DWVWVH RKERFP +SKL GDGPF V ER Sbjct: 940 RKHIEMKNEQYATKANKGRRQVLFEPGDWVWVHMRKERFPTHGRSKLHPXGDGPFQVPER 999 Query: 377 INDNAYKIDLPGEYGVSATFNISDLSPFDMDADLKTNLFKERGDD 511 INDNAYK+DLPG+ D + N F+ERG+D Sbjct: 1000 INDNAYKLDLPGD-------------------DSRMNPFEERGND 1025 Score = 69.7 bits (169), Expect(3) = 3e-31 Identities = 29/56 (51%), Positives = 40/56 (71%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170 DCLPF EF+YNRS+HST+ +SPF++VYGF NE+++LDGEKK+ + Sbjct: 876 DCLPFIEFSYNRSVHSTTNFSPFKIVYGFNPLTPLDLLLLPVNEMTSLDGEKKAEM 931 Score = 21.9 bits (45), Expect(3) = 3e-31 Identities = 8/12 (66%), Positives = 11/12 (91%) Frame = +1 Query: 154 KKKAELVKSLHE 189 +KKAE+VK LH+ Sbjct: 926 EKKAEMVKKLHD 937 >ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa Japonica Group] Length = 681 Score = 107 bits (268), Expect(2) = 4e-31 Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 3/92 (3%) Frame = +2 Query: 251 RKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLERINDNAYKIDLPGEYGVSA 430 RKK+ P D VWVH RK+RFP ++KSKL RGDGPF VL +INDNAYKI+LP +YGVS Sbjct: 443 RKKVTFEPGDLVWVHLRKDRFPQKRKSKLMPRGDGPFRVLSKINDNAYKIELPEDYGVSP 502 Query: 431 TFNISDLSPF---DMDADLKTNLFKERGDDTD 517 TFN++DL+PF + ++ F+E DD D Sbjct: 503 TFNVADLTPFFGLEDSESSRSTPFQEGEDDED 534 Score = 52.8 bits (125), Expect(2) = 4e-31 Identities = 23/52 (44%), Positives = 31/52 (59%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEK 158 +CLP EFAYNR++HST+ PFE+VYGFK E S+++ K Sbjct: 361 ECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLAPIDLLPLPLQERSDMEASK 412 >gb|AAM94350.1| gag-pol polyprotein [Zea mays] Length = 1618 Score = 105 bits (263), Expect(2) = 9e-30 Identities = 52/110 (47%), Positives = 71/110 (64%), Gaps = 3/110 (2%) Frame = +2 Query: 197 RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376 + NIE GRK++ P D VW+H RKERFP +KSKL R DGPF VLE+ Sbjct: 1457 KENIERMNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVLEK 1516 Query: 377 INDNAYKIDLPGEYGVSATFNISDLSPF---DMDADLKTNLFKERGDDTD 517 INDNAY++DLP ++GVS TFNI+DL P+ +++ + +T +E +D D Sbjct: 1517 INDNAYRLDLPADFGVSPTFNIADLKPYLGEEVELESRTTQMQEGENDED 1566 Score = 50.1 bits (118), Expect(2) = 9e-30 Identities = 22/56 (39%), Positives = 31/56 (55%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170 DCLP EFAYNRS+HST+ PF++VYG +E N D +++ + Sbjct: 1393 DCLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAEL 1448 >gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] Length = 1720 Score = 102 bits (254), Expect(2) = 2e-29 Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 3/110 (2%) Frame = +2 Query: 197 RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376 + NIE GRK +V P D VW+H RK+RFP+ +KSKL R GPF VLE+ Sbjct: 1513 KENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEK 1572 Query: 377 INDNAYKIDLPGEYGVSATFNISDLSPFDMDAD---LKTNLFKERGDDTD 517 INDNAY+++LP ++GVS TFNI+DL P+ + D +T +E DD D Sbjct: 1573 INDNAYRLELPADFGVSPTFNIADLKPYLGEEDELPSRTTSVQEGEDDED 1622 Score = 52.4 bits (124), Expect(2) = 2e-29 Identities = 23/56 (41%), Positives = 33/56 (58%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170 +CLP EFAYNRS+HST+ PFE+VYGF +E N D ++++ + Sbjct: 1449 ECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAEL 1504 >gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group] gi|31431012|gb|AAP52850.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 2447 Score = 105 bits (262), Expect(2) = 3e-29 Identities = 52/110 (47%), Positives = 70/110 (63%), Gaps = 3/110 (2%) Frame = +2 Query: 197 RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376 + NIE GR++L P D VW+H RKERFP+ +KSKL R DGPF VL + Sbjct: 1454 KENIERMNAKYKFAGDKGRRELTFEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLAK 1513 Query: 377 INDNAYKIDLPGEYGVSATFNISDLSPF---DMDADLKTNLFKERGDDTD 517 IN+NAYKIDLP ++GVS TFN++DL P+ + + + +T +E DD D Sbjct: 1514 INENAYKIDLPADFGVSPTFNVADLKPYLGEEDELESRTTQMQEGEDDED 1563 Score = 48.9 bits (115), Expect(2) = 3e-29 Identities = 21/56 (37%), Positives = 32/56 (57%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170 +CLP EFAYNRS+HST+ PF++VYG +E N D ++++ + Sbjct: 1390 ECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1445 >gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] Length = 1717 Score = 102 bits (253), Expect(2) = 3e-29 Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 3/110 (2%) Frame = +2 Query: 197 RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376 + NIE GRK +V P D VW+H RK+RFP+ +KSKL R GPF VLE+ Sbjct: 1510 KENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEK 1569 Query: 377 INDNAYKIDLPGEYGVSATFNISDLSPFDMDAD---LKTNLFKERGDDTD 517 INDNAY+++LP ++GVS TFNI+DL P+ + D +T +E DD D Sbjct: 1570 INDNAYRLELPXDFGVSPTFNIADLKPYLGEEDELPSRTTSVQEGEDDED 1619 Score = 52.4 bits (124), Expect(2) = 3e-29 Identities = 23/56 (41%), Positives = 33/56 (58%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170 +CLP EFAYNRS+HST+ PFE+VYGF +E N D ++++ + Sbjct: 1446 ECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAEL 1501 >gb|AAQ72730.1| putative integrase [Petunia x hybrida] Length = 437 Score = 107 bits (267), Expect(2) = 4e-29 Identities = 54/109 (49%), Positives = 70/109 (64%) Frame = +2 Query: 191 RARANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVL 370 +A+ N+E GRKK+ L D+VWVHFRKERFPN +K KL RGDGPF VL Sbjct: 226 KAKKNLEESYAKVAAKKNKGRKKVELKKGDYVWVHFRKERFPNLRKGKLAPRGDGPFQVL 285 Query: 371 ERINDNAYKIDLPGEYGVSATFNISDLSPFDMDADLKTNLFKERGDDTD 517 +IN+NAY +DLP EY VS TFN+SDL P ++ + N +E +D + Sbjct: 286 SKINNNAYVVDLPSEYQVSNTFNVSDLVPLNVGNEEVVNDDEEVVNDDE 334 Score = 46.6 bits (109), Expect(2) = 4e-29 Identities = 21/55 (38%), Positives = 30/55 (54%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSR 167 D LP EFAYNR++HS G +PFE VYGF + N +G+ +++ Sbjct: 164 DRLPMMEFAYNRTLHSMIGMTPFECVYGFNPLIPLDLTPLPREMVVNFEGKARAK 218 >gb|AAX96591.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa Japonica Group] gi|77550404|gb|ABA93201.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1297 Score = 104 bits (259), Expect(2) = 6e-29 Identities = 52/110 (47%), Positives = 70/110 (63%), Gaps = 3/110 (2%) Frame = +2 Query: 197 RANIEXXXXXXXXXXXXGRKKLVLMPRDWVWVHFRKERFPNQKKSKLDARGDGPFLVLER 376 + NIE GR++L P D VW+H RKERFP+ +KSKL R DGPF VL + Sbjct: 1122 KENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLMPRADGPFKVLAK 1181 Query: 377 INDNAYKIDLPGEYGVSATFNISDLSPF---DMDADLKTNLFKERGDDTD 517 IN+NAYKIDLP ++GVS TFN++DL P+ + + + +T +E DD D Sbjct: 1182 INENAYKIDLPADFGVSPTFNVADLKPYLGEEDELESRTTQMQEGEDDED 1231 Score = 48.9 bits (115), Expect(2) = 6e-29 Identities = 21/56 (37%), Positives = 32/56 (57%) Frame = +3 Query: 3 DCLPFFEFAYNRSIHSTSGYSPFELVYGFKXXXXXXXXXXXXNELSNLDGEKKSRI 170 +CLP EFAYNRS+HST+ PF++VYG +E N D ++++ + Sbjct: 1058 ECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAEL 1113