BLASTX nr result
ID: Jatropha_contig00018555
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00018555
(642 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002720114.1| rps4 [Jatropha curcas] gi|224979567|gb|ACN72... 76 9e-12
gb|ABV65258.1| ribosomal protein S4, partial (chloroplast) [Picr... 72 1e-10
gb|AFV61816.1| ribosomal protein S4 (chloroplast) [Origanum vulg... 72 1e-10
ref|YP_007507113.1| ribosomal protein S4 (chloroplast) [Salvia m... 72 1e-10
gb|ABV65292.1| ribosomal protein S4, partial (chloroplast) [Eucr... 72 1e-10
gb|ABV65285.1| ribosomal protein S4, partial (chloroplast) [Cryp... 72 1e-10
gb|ABV65282.1| ribosomal protein S4, partial (chloroplast) [Cori... 72 1e-10
gb|ABV65291.1| ribosomal protein S4, partial (chloroplast) [Elat... 72 2e-10
gb|AAP80900.1| small ribosomal protein 4, partial (chloroplast) ... 72 2e-10
ref|YP_004564006.1| ribosomal protein S4 [Olea woodiana subsp. w... 71 2e-10
gb|ABG74794.1| ribosomal protein S4 [Jasminum abyssinicum] 71 2e-10
gb|ABG74820.1| ribosomal protein S4 [Jasminum subhumile] 71 2e-10
gb|AHA84950.1| ribosomal protein S4 [Ajuga reptans] 71 3e-10
ref|YP_008815939.1| ribosomal protein S4 (chloroplast) [Lindenbe... 71 3e-10
ref|YP_086968.1| ribosomal protein S4 [Panax ginseng] gi|3594221... 71 3e-10
ref|YP_398864.1| ribosomal protein S4 [Nicotiana tomentosiformis... 71 3e-10
ref|NP_054500.1| ribosomal protein S4 [Nicotiana tabacum] gi|781... 71 3e-10
ref|YP_006666032.1| ribosomal protein S4 (chloroplast) [Capsicum... 71 3e-10
gb|AEZ52945.1| ribosomal protein S4, partial (chloroplast) [Gent... 71 3e-10
gb|AEN93527.1| ribosomal protein S4 [Tetracera asiatica] 71 3e-10
>ref|YP_002720114.1| rps4 [Jatropha curcas] gi|224979567|gb|ACN72694.1| rps4 [Jatropha
curcas]
Length = 201
Score = 75.9 bits (185), Expect = 9e-12
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT
Sbjct: 167 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 201
>gb|ABV65258.1| ribosomal protein S4, partial (chloroplast) [Picramnia polyantha]
Length = 168
Score = 72.4 bits (176), Expect = 1e-10
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HPIQYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 134 HPIQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 168
>gb|AFV61816.1| ribosomal protein S4 (chloroplast) [Origanum vulgare subsp.
vulgare]
Length = 201
Score = 72.0 bits (175), Expect = 1e-10
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP+QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 167 HPVQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|YP_007507113.1| ribosomal protein S4 (chloroplast) [Salvia miltiorrhiza]
gi|401879744|gb|AFQ30931.1| ribosomal protein S4
(chloroplast) [Salvia miltiorrhiza]
Length = 201
Score = 72.0 bits (175), Expect = 1e-10
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP+QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 167 HPVQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>gb|ABV65292.1| ribosomal protein S4, partial (chloroplast) [Eucryphia lucida]
Length = 193
Score = 72.0 bits (175), Expect = 1e-10
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP+QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 159 HPVQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 193
>gb|ABV65285.1| ribosomal protein S4, partial (chloroplast) [Crypteronia
paniculata]
Length = 191
Score = 72.0 bits (175), Expect = 1e-10
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP+QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 157 HPVQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 191
>gb|ABV65282.1| ribosomal protein S4, partial (chloroplast) [Coriaria nepalensis]
Length = 195
Score = 72.0 bits (175), Expect = 1e-10
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP+QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 161 HPVQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 195
>gb|ABV65291.1| ribosomal protein S4, partial (chloroplast) [Elatine triandra]
Length = 183
Score = 71.6 bits (174), Expect = 2e-10
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP+QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 149 HPLQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 183
>gb|AAP80900.1| small ribosomal protein 4, partial (chloroplast) [Rubus odoratus]
Length = 184
Score = 71.6 bits (174), Expect = 2e-10
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP+QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 150 HPLQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 184
>ref|YP_004564006.1| ribosomal protein S4 [Olea woodiana subsp. woodiana]
gi|334084661|emb|CBS29352.1| ribosomal protein S4 [Olea
woodiana subsp. woodiana]
Length = 203
Score = 71.2 bits (173), Expect = 2e-10
Identities = 34/37 (91%), Positives = 34/37 (91%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT*T 532
HP QYKGLVNQIIDSKW GLKINELLVVEYYSRQT T
Sbjct: 167 HPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQTET 203
>gb|ABG74794.1| ribosomal protein S4 [Jasminum abyssinicum]
Length = 203
Score = 71.2 bits (173), Expect = 2e-10
Identities = 34/37 (91%), Positives = 34/37 (91%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT*T 532
HP QYKGLVNQIIDSKW GLKINELLVVEYYSRQT T
Sbjct: 167 HPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQTKT 203
>gb|ABG74820.1| ribosomal protein S4 [Jasminum subhumile]
Length = 203
Score = 71.2 bits (173), Expect = 2e-10
Identities = 34/37 (91%), Positives = 34/37 (91%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT*T 532
HP QYKGLVNQIIDSKW GLKINELLVVEYYSRQT T
Sbjct: 167 HPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQTKT 203
>gb|AHA84950.1| ribosomal protein S4 [Ajuga reptans]
Length = 201
Score = 70.9 bits (172), Expect = 3e-10
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 167 HPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|YP_008815939.1| ribosomal protein S4 (chloroplast) [Lindenbergia philippensis]
gi|557136865|emb|CDI43920.1| ribosomal protein S4
(chloroplast) [Lindenbergia philippensis]
Length = 201
Score = 70.9 bits (172), Expect = 3e-10
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 167 HPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|YP_086968.1| ribosomal protein S4 [Panax ginseng]
gi|359422146|ref|YP_004935554.1| ribosomal protein S4
(chloroplast) [Eleutherococcus senticosus]
gi|558602914|ref|YP_008814945.1| ribosomal protein S4
(chloroplast) [Brassaiopsis hainla]
gi|558603002|ref|YP_008815032.1| ribosomal protein S4
(chloroplast) [Metapanax delavayi]
gi|558603090|ref|YP_008815119.1| ribosomal protein S4
(chloroplast) [Schefflera delavayi]
gi|563940281|ref|YP_008814858.1| ribosomal protein S4
(chloroplast) [Aralia undulata]
gi|563940387|ref|YP_008815206.1| ribosomal protein S4
(chloroplast) [Kalopanax septemlobus]
gi|62287232|sp|Q68S04.1|RR4_PANGI RecName: Full=30S
ribosomal protein S4, chloroplastic
gi|51235315|gb|AAT98511.1| ribosomal protein S4 [Panax
ginseng] gi|347448209|gb|AEO92621.1| ribosomal protein
S4 (chloroplast) [Eleutherococcus senticosus]
gi|458599092|gb|AGG38958.1| ribosomal protein S4
(chloroplast) [Aralia undulata]
gi|458599194|gb|AGG39045.1| ribosomal protein S4
(chloroplast) [Brassaiopsis hainla]
gi|458599373|gb|AGG39132.1| ribosomal protein S4
(chloroplast) [Metapanax delavayi]
gi|458599526|gb|AGG39219.1| ribosomal protein S4
(chloroplast) [Schefflera delavayi]
gi|458599614|gb|AGG39306.1| ribosomal protein S4
(chloroplast) [Kalopanax septemlobus]
Length = 201
Score = 70.9 bits (172), Expect = 3e-10
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 167 HPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|YP_398864.1| ribosomal protein S4 [Nicotiana tomentosiformis]
gi|90101664|sp|Q33C33.1|RR4_NICTO RecName: Full=30S
ribosomal protein S4, chloroplastic
gi|80750926|dbj|BAE48002.1| ribosomal protein S4
[Nicotiana tomentosiformis]
Length = 201
Score = 70.9 bits (172), Expect = 3e-10
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 167 HPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|NP_054500.1| ribosomal protein S4 [Nicotiana tabacum]
gi|78102536|ref|YP_358677.1| ribosomal protein S4
[Nicotiana sylvestris] gi|133960|sp|P06359.1|RR4_TOBAC
RecName: Full=30S ribosomal protein S4, chloroplastic
gi|90101663|sp|Q3C1H5.1|RR4_NICSY RecName: Full=30S
ribosomal protein S4, chloroplastic
gi|11834|emb|CAA77354.1| ribosomal protein S4 [Nicotiana
tabacum] gi|77799563|dbj|BAE46652.1| ribosomal protein
S4 [Nicotiana sylvestris] gi|225202|prf||1211235AG
ribosomal protein S4
Length = 201
Score = 70.9 bits (172), Expect = 3e-10
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 167 HPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|YP_006666032.1| ribosomal protein S4 (chloroplast) [Capsicum annuum]
gi|401065934|gb|AFP90778.1| ribosomal protein S4
(chloroplast) [Capsicum annuum]
Length = 201
Score = 70.9 bits (172), Expect = 3e-10
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 167 HPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>gb|AEZ52945.1| ribosomal protein S4, partial (chloroplast) [Gentiana pannonica]
Length = 187
Score = 70.9 bits (172), Expect = 3e-10
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 153 HPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 187
>gb|AEN93527.1| ribosomal protein S4 [Tetracera asiatica]
Length = 180
Score = 70.9 bits (172), Expect = 3e-10
Identities = 33/35 (94%), Positives = 33/35 (94%)
Frame = -1
Query: 642 HPIQYKGLVNQIIDSKWGGLKINELLVVEYYSRQT 538
HP QYKGLVNQIIDSKW GLKINELLVVEYYSRQT
Sbjct: 146 HPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 180