BLASTX nr result
ID: Jatropha_contig00018339
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00018339
(605 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY01054.1| RNA-directed DNA polymerase (Reverse transcriptas... 103 3e-21
gb|EOX94716.1| RNA-directed DNA polymerase (Reverse transcriptas... 103 3e-21
gb|EOY22161.1| RNA-directed DNA polymerase (Reverse transcriptas... 102 4e-21
gb|EOY10467.1| RNA-directed DNA polymerase (Reverse transcriptas... 102 9e-21
gb|EOY03806.1| RNA-directed DNA polymerase [Theobroma cacao] 100 1e-20
gb|EOX94216.1| RNA-directed DNA polymerase [Theobroma cacao] 100 2e-20
gb|EOY19960.1| RNA-directed DNA polymerase, putative [Theobroma ... 103 3e-20
gb|EOY20481.1| RNA-directed DNA polymerase (Reverse transcriptas... 98 3e-19
gb|EOY21231.1| RNA-directed DNA polymerase [Theobroma cacao] 96 1e-18
dbj|BAJ53209.1| JHL23C09.1 [Jatropha curcas] 94 2e-18
gb|EOY15725.1| RNA-directed DNA polymerase (Reverse transcriptas... 96 2e-18
ref|XP_004243916.1| PREDICTED: uncharacterized protein LOC101258... 91 3e-18
gb|EOY26501.1| RNA-directed DNA polymerase (Reverse transcriptas... 93 3e-18
gb|EOY20987.1| RNA-directed DNA polymerase (Reverse transcriptas... 97 3e-18
gb|EOY21879.1| RNA-directed DNA polymerase (Reverse transcriptas... 93 4e-18
gb|EOX95167.1| RNA-directed DNA polymerase (Reverse transcriptas... 94 4e-18
gb|EOY10681.1| Uncharacterized protein TCM_025982 [Theobroma cacao] 96 9e-18
gb|EOY21330.1| RNA-directed DNA polymerase (Reverse transcriptas... 93 1e-17
gb|EOY28052.1| RNA-directed DNA polymerase (Reverse transcriptas... 93 1e-17
gb|EOY20400.1| RNA-directed DNA polymerase (Reverse transcriptas... 91 1e-17
>gb|EOY01054.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 1047
Score = 103 bits (256), Expect(2) = 3e-21
Identities = 49/113 (43%), Positives = 77/113 (68%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + K + + ++W Y++L L++E L A QLY+KR+ + ++K
Sbjct: 919 LPIEVEIPSLRVLK--EVQLEEAEWVNARYEQLNLIEEKRLTALCHGQLYQKRMMRAYDK 976
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDME 339
+ HS+ + +LVLK++ PN HDLR K+ PNWEGPF++KK FS GAL L++M+
Sbjct: 977 KAHSRQFREGELVLKRILPNQHDLRGKWTPNWEGPFVVKKAFSGGALILAEMD 1029
Score = 24.6 bits (52), Expect(2) = 3e-21
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFYA 392
G F+ P+N D +KK++A
Sbjct: 1030 GREFSNPVNADAVKKYFA 1047
>gb|EOX94716.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 642
Score = 103 bits (256), Expect(2) = 3e-21
Identities = 49/113 (43%), Positives = 77/113 (68%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + K + + ++W Y++L L++E L A QLY+KR+ + ++K
Sbjct: 514 LPIEVEIPSLRVLK--EVQLEEAEWVNARYEQLNLIEEKRLTALCHGQLYQKRMMRAYDK 571
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDME 339
+ HS+ + +LVLK++ PN HDLR K+ PNWEGPF++KK FS GAL L++M+
Sbjct: 572 KAHSRQFREGELVLKRILPNQHDLRGKWTPNWEGPFVVKKAFSGGALILAEMD 624
Score = 24.6 bits (52), Expect(2) = 3e-21
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFYA 392
G F+ P+N D +KK++A
Sbjct: 625 GREFSNPVNADAVKKYFA 642
>gb|EOY22161.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 136
Score = 102 bits (255), Expect(2) = 4e-21
Identities = 49/113 (43%), Positives = 77/113 (68%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + K + + ++W Y++L L++E L A QLY+KR+ + ++K
Sbjct: 8 LPIEVEIPSLRVFK--EVQLEEAEWVNARYEQLNLIEEKRLTALCHGQLYQKRMMRAYDK 65
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDME 339
+ HS+ + +LVLK++ PN HD RRK+ PNWEGPF++KK FS GAL L++M+
Sbjct: 66 KAHSRQFREGELVLKRILPNQHDPRRKWTPNWEGPFVVKKAFSGGALILAEMD 118
Score = 24.6 bits (52), Expect(2) = 4e-21
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFYA 392
G F+ P+N D +KK++A
Sbjct: 119 GREFSNPVNADAVKKYFA 136
>gb|EOY10467.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 139
Score = 102 bits (255), Expect(2) = 9e-21
Identities = 49/113 (43%), Positives = 77/113 (68%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + K + + ++W Y++L L++E L A QLY+KR+ + ++K
Sbjct: 5 LPIEVEIPSLRVLK--EVQLEEAEWVNARYEQLNLIEEKRLTALCHRQLYQKRMMRAYDK 62
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDME 339
+ HS+ + +LVLK++ PN HDLR K+ PNWEGPF++KK FS GAL L++M+
Sbjct: 63 KAHSRQFREGELVLKRILPNQHDLRGKWTPNWEGPFVVKKAFSGGALILAEMD 115
Score = 23.5 bits (49), Expect(2) = 9e-21
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFY 389
G F+ P+N D +KK++
Sbjct: 116 GREFSNPVNADAIKKYF 132
>gb|EOY03806.1| RNA-directed DNA polymerase [Theobroma cacao]
Length = 386
Score = 100 bits (250), Expect(2) = 1e-20
Identities = 49/113 (43%), Positives = 76/113 (67%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + K + + ++W Y++L L++E L A QLY+KR+ + ++K
Sbjct: 258 LPIEVEIPSLRVLK--EVQLEETEWVNARYEQLNLIEEKRLTALCHGQLYQKRMMRAYDK 315
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDME 339
+ HS+ + +LVLK++ PN HD R K+ PNWEGPF+IKK FS GAL L++M+
Sbjct: 316 KAHSRQFREGELVLKRILPNQHDPRGKWTPNWEGPFVIKKAFSGGALILAEMD 368
Score = 24.6 bits (52), Expect(2) = 1e-20
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFYA 392
G F+ P+N D +KK++A
Sbjct: 369 GREFSNPVNADAVKKYFA 386
>gb|EOX94216.1| RNA-directed DNA polymerase [Theobroma cacao]
Length = 460
Score = 100 bits (249), Expect(2) = 2e-20
Identities = 48/113 (42%), Positives = 76/113 (67%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + K + + ++W Y++L L++E L A QLY+KR+ + ++K
Sbjct: 332 LPIEVEIPSLRVLK--EVQLEEAEWVNARYEQLNLIEEKRLTALCHGQLYQKRMMRAYDK 389
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDME 339
+ HS+ + +LVLK++ PN HD R K+ PNWEGPF++KK FS GAL L++M+
Sbjct: 390 KAHSRQFREGELVLKRILPNQHDPRGKWTPNWEGPFVVKKAFSGGALILAEMD 442
Score = 24.6 bits (52), Expect(2) = 2e-20
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFYA 392
G F+ P+N D +KK++A
Sbjct: 443 GREFSNPVNADAVKKYFA 460
>gb|EOY19960.1| RNA-directed DNA polymerase, putative [Theobroma cacao]
Length = 2200
Score = 103 bits (257), Expect = 3e-20
Identities = 50/119 (42%), Positives = 78/119 (65%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + K + + ++W Y++L L++E L A QLY+KR+ + ++K
Sbjct: 1695 LPIEVEIPSLRVLK--EVQLEEAEWVNARYEQLNLIEEKRLTALCHGQLYQKRMMRAYDK 1752
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDMEAMYSPN 357
+ HS+ + +LVLK+ PN HD R K+ PNWEGPF++KK FS+GAL L++M+ M N
Sbjct: 1753 KAHSRQFREGELVLKRTLPNQHDPRGKWTPNWEGPFVVKKAFSRGALILAEMDGMEFSN 1811
>gb|EOY20481.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 210
Score = 97.8 bits (242), Expect(2) = 3e-19
Identities = 46/119 (38%), Positives = 77/119 (64%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + + ++++W + Y++L L++E L A Q+Y++R+ + + K
Sbjct: 82 LPVEVEIPSLRVLM--ETKLEDAEWVRSRYEQLNLIEEKRLTALCHGQMYQRRMMRAYEK 139
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDMEAMYSPN 357
+VH + + +LVLK++ PN D R K+ PNWEGP+++KK FS GAL L+DM+ PN
Sbjct: 140 KVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGALILADMDGGDLPN 198
Score = 23.1 bits (48), Expect(2) = 3e-19
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFYA 392
G PIN D +KK+YA
Sbjct: 193 GGDLPNPINADAVKKYYA 210
>gb|EOY21231.1| RNA-directed DNA polymerase [Theobroma cacao]
Length = 338
Score = 96.3 bits (238), Expect(2) = 1e-18
Identities = 46/119 (38%), Positives = 76/119 (63%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + ++++W + Y++L L++E L A Q+Y++R+ + + K
Sbjct: 210 LPVEVEIPSLRVLM--ETELEDAEWVRSRYEQLNLIEEKRLAALCHGQMYQRRMMRAYEK 267
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDMEAMYSPN 357
+VH + + +LVLK++ PN D R K+ PNWEGP+++KK FS GAL L+DM+ PN
Sbjct: 268 KVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGALILADMDGGDLPN 326
Score = 23.1 bits (48), Expect(2) = 1e-18
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFYA 392
G PIN D +KK+YA
Sbjct: 321 GGDLPNPINADAVKKYYA 338
>dbj|BAJ53209.1| JHL23C09.1 [Jatropha curcas]
Length = 525
Score = 94.0 bits (232), Expect(2) = 2e-18
Identities = 48/119 (40%), Positives = 77/119 (64%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+EVQS + + + + WAEN++ +L +DE L A Q+Y++R+A+HFNK
Sbjct: 397 LPIELEVQSARVIR--ESQISEANWAENYHLQLLGMDEKRLRAIHQTQVYQRRMARHFNK 454
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDMEAMYSPN 357
RV + L+ LVLK++ + D R KF+P+W GP+++KKI S GA+ L+D++ + N
Sbjct: 455 RVKDRKLEEGCLVLKEIRQPVIDPRGKFRPHWAGPYVLKKILSGGAVILTDLDGLEFTN 513
Score = 24.6 bits (52), Expect(2) = 2e-18
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFY 389
G FT P NLD+LK+++
Sbjct: 508 GLEFTNPCNLDQLKRYF 524
>gb|EOY15725.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 284
Score = 95.5 bits (236), Expect(2) = 2e-18
Identities = 46/119 (38%), Positives = 77/119 (64%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + + ++++W + Y++L L++E L A Q+Y++R+ + + K
Sbjct: 156 LPVEVEIPSLRVLM--ETKLEDAEWVCSRYEQLNLIEEKRLAALCHGQMYQRRMIRAYEK 213
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDMEAMYSPN 357
+VH + + +LVLK++ PN D R K+ PNWEGP+++KK FS GAL L+DM+ PN
Sbjct: 214 KVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGALILTDMDGGDLPN 272
Score = 23.1 bits (48), Expect(2) = 2e-18
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFYA 392
G PIN D +KK+YA
Sbjct: 267 GGDLPNPINADAVKKYYA 284
>ref|XP_004243916.1| PREDICTED: uncharacterized protein LOC101258388 [Solanum
lycopersicum]
Length = 2882
Score = 91.3 bits (225), Expect(2) = 3e-18
Identities = 43/113 (38%), Positives = 74/113 (65%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
+P E+E+ SL I + N++W +LAL+DE + A QLY++R+ + F+K
Sbjct: 2754 VPVEVEIPSLRIIQ--EAELSNAEWVSKRIDQLALIDEKRMVAVCHGQLYRQRMTRAFHK 2811
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDME 339
RV ++ +V LVLK+++P+ + + KF PNW+GP++++K+ S GAL LS+M+
Sbjct: 2812 RVRTRNFEVGQLVLKRIFPHQDEYKGKFAPNWKGPYMVRKVLSGGALVLSEMD 2864
Score = 26.6 bits (57), Expect(2) = 3e-18
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFYA 392
G V+T+PIN D +K++YA
Sbjct: 2865 GAVWTKPINSDAVKRYYA 2882
>gb|EOY26501.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 353
Score = 93.2 bits (230), Expect(2) = 3e-18
Identities = 46/113 (40%), Positives = 73/113 (64%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + K + + ++W Y++L L++E L A QLY+KR+ + + K
Sbjct: 225 LPIEVEIPSLRVLK--EVQLEEAEWVNACYEQLNLIEEKRLTALCHGQLYQKRMIRAYGK 282
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDME 339
+ H + + +LVLK++ PN HD R K+ NWEGPF++KK FS GAL L++M+
Sbjct: 283 KAHPRQFREGELVLKRILPNQHDPRGKWTLNWEGPFVVKKAFSGGALILAEMD 335
Score = 24.6 bits (52), Expect(2) = 3e-18
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFYA 392
G F+ P+N D +KK++A
Sbjct: 336 GREFSNPVNADAVKKYFA 353
>gb|EOY20987.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 857
Score = 97.1 bits (240), Expect = 3e-18
Identities = 47/119 (39%), Positives = 77/119 (64%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + + ++++W + Y++L L++E L A Q+Y++R+ + + K
Sbjct: 699 LPVEVEIPSLRVLM--ETKLEDAEWVRSCYEQLNLIEEKRLAALCHGQMYQRRMMRAYEK 756
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDMEAMYSPN 357
+VH K + +LVLK++ PN D R K+ PNWEGP+++KK FS GAL L+DM+ PN
Sbjct: 757 KVHPKQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGALILADMDGGDLPN 815
>gb|EOY21879.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease
H, putative [Theobroma cacao]
Length = 433
Score = 92.8 bits (229), Expect(2) = 4e-18
Identities = 45/110 (40%), Positives = 71/110 (64%)
Frame = +1
Query: 10 EIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNKRVH 189
E+E+ SL + K + ++W Y++L L++E L A QLY+KR+ + + K+ H
Sbjct: 308 EVEIPSLRVLK--EVHLEEAEWVNARYEQLNLIEEKRLTALCHGQLYQKRMMRAYGKKAH 365
Query: 190 SKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDME 339
S+ + +LVLK++ PN HD K+ PNWEGPF++KK FS GAL L++M+
Sbjct: 366 SRQFREGELVLKRILPNQHDPCGKWTPNWEGPFVVKKAFSGGALILTEMD 415
Score = 24.6 bits (52), Expect(2) = 4e-18
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFYA 392
G F+ P+N D +KK++A
Sbjct: 416 GREFSNPVNADAVKKYFA 433
>gb|EOX95167.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 210
Score = 94.4 bits (233), Expect(2) = 4e-18
Identities = 45/119 (37%), Positives = 76/119 (63%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + ++++W + Y++L L++E L A Q+Y++R+ + + K
Sbjct: 82 LPVEVEIPSLRVLM--EAELEDAEWVRSRYEQLNLIEEKRLAALCHGQMYQRRMMRAYEK 139
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDMEAMYSPN 357
+VH + + +LVLK++ PN D R K+ PNWEGP+++KK FS GAL L++M+ PN
Sbjct: 140 KVHPRQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGALILANMDGGDLPN 198
Score = 23.1 bits (48), Expect(2) = 4e-18
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFYA 392
G PIN D +KK+YA
Sbjct: 193 GGDLPNPINADAVKKYYA 210
>gb|EOY10681.1| Uncharacterized protein TCM_025982 [Theobroma cacao]
Length = 828
Score = 95.5 bits (236), Expect = 9e-18
Identities = 46/119 (38%), Positives = 76/119 (63%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + ++++W + Y++L L++E +L A Q+Y++R + + K
Sbjct: 691 LPVEVEIPSLRVLM--ETELEDAEWVRSRYEQLNLIEEKMLAALCHGQMYQRRRMRAYEK 748
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDMEAMYSPN 357
+VH K + +LVLK++ PN D R K+ PNWEGP+++KK FS GAL L++M+ PN
Sbjct: 749 KVHPKQFREGELVLKRILPNQTDFRGKWMPNWEGPYVVKKAFSGGALILANMDGGDLPN 807
>gb|EOY21330.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease
H, putative [Theobroma cacao]
Length = 488
Score = 92.8 bits (229), Expect(2) = 1e-17
Identities = 44/112 (39%), Positives = 72/112 (64%)
Frame = +1
Query: 4 PTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNKR 183
P E+E+ SL + K + + ++W Y++L L++E L A QLY+KR+ K + K+
Sbjct: 361 PIEVEIPSLRVLK--EVQLEEAEWVNTRYEQLNLIEEKRLTALCHGQLYQKRMMKAYGKK 418
Query: 184 VHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDME 339
VH + + L+LK++ PN D R K+ NWEGPF++KK+FS+G L L++M+
Sbjct: 419 VHPRQFQEGKLILKRILPNQQDPRGKWTLNWEGPFVVKKVFSRGTLILAEMD 470
Score = 23.1 bits (48), Expect(2) = 1e-17
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +3
Query: 348 FTEPINLDRLKKFYA 392
F+ P+N D +KK++A
Sbjct: 474 FSNPVNADAVKKYFA 488
>gb|EOY28052.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 284
Score = 92.8 bits (229), Expect(2) = 1e-17
Identities = 44/119 (36%), Positives = 76/119 (63%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + ++++W + Y++L L++E L A Q+Y++R+ + + K
Sbjct: 156 LPVEVEIPSLRVLM--ETELEDAEWVRSRYEQLNLIEEKRLAALCHGQMYQRRMMRAYEK 213
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDMEAMYSPN 357
+VH + + +LVLK++ PN D + K+ PNWEGP+++KK FS GAL L++M+ PN
Sbjct: 214 KVHPRQFREGELVLKRILPNQTDFQGKWMPNWEGPYVVKKAFSGGALILANMDGGDLPN 272
Score = 23.1 bits (48), Expect(2) = 1e-17
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFYA 392
G PIN D +KK+YA
Sbjct: 267 GGDLPNPINTDAVKKYYA 284
>gb|EOY20400.1| RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H
[Theobroma cacao]
Length = 210
Score = 91.3 bits (225), Expect(2) = 1e-17
Identities = 45/113 (39%), Positives = 72/113 (63%)
Frame = +1
Query: 1 LPTEIEVQSLHITK*WNPRFQNSQWAENHYQELALLDE*ILNARFIDQLYKKRIAKHFNK 180
LP E+E+ SL + K + + ++W HY++L L++E L A LY+KR+ + + K
Sbjct: 82 LPIEVEIPSLRVLK--EVQLEEAEWVNIHYEQLNLIEEKKLTALCHGLLYQKRMMRAYGK 139
Query: 181 RVHSKLLKVRDLVLKQMWPNIHDLRRKFKPNWEGPFLIKKIFSKGALKLSDME 339
+VH + + +LVLK++ PN D R K+ NWE PF++KK FS+G L L+DM+
Sbjct: 140 KVHPRQFQEGELVLKRILPNQQDPRGKWMSNWERPFVVKKAFSEGTLILADMD 192
Score = 24.6 bits (52), Expect(2) = 1e-17
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 339 GNVFTEPINLDRLKKFYA 392
G F+ P+N D +KK++A
Sbjct: 193 GKEFSNPVNADAVKKYFA 210