BLASTX nr result

ID: Jatropha_contig00017939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00017939
         (282 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512265.1| ATP-dependent helicase NAM7, putative [Ricin...    67   2e-09
gb|ERP60532.1| hypothetical protein POPTR_0005s04900g [Populus t...    56   5e-06

>ref|XP_002512265.1| ATP-dependent helicase NAM7, putative [Ricinus communis]
           gi|223548226|gb|EEF49717.1| ATP-dependent helicase NAM7,
           putative [Ricinus communis]
          Length = 850

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 41/93 (44%), Positives = 52/93 (55%)
 Frame = +3

Query: 3   EFPIPKETKELLENKQVPDVLVEEFKDEELCYFLQHIAHNGRATFGGNHSCLIS*NIYQA 182
           EFPIPK  +ELLENKQVPDVL+E  + ++   F   +              LI   ++  
Sbjct: 217 EFPIPKGIRELLENKQVPDVLLEGLRRKKYASFFSTL--------------LIIEELH-- 260

Query: 183 FVQN*LFLFQKEMRCHDMEFVNLRQRGPQLLAL 281
                    +KEMRCHDME VN+R+RG QLLAL
Sbjct: 261 --------LEKEMRCHDMECVNMRRRGAQLLAL 285


>gb|ERP60532.1| hypothetical protein POPTR_0005s04900g [Populus trichocarpa]
          Length = 882

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 36/93 (38%), Positives = 49/93 (52%)
 Frame = +3

Query: 3   EFPIPKETKELLENKQVPDVLVEEFKDEELCYFLQHIAHNGRATFGGNHSCLIS*NIYQA 182
           +FPIP    ELL+NKQVPDV++E+                   T+    S L+       
Sbjct: 216 QFPIPSNLIELLQNKQVPDVIMEDLS---------------MGTYAAFFSILV------- 253

Query: 183 FVQN*LFLFQKEMRCHDMEFVNLRQRGPQLLAL 281
            V   L L ++EMRCH+ME VN+R++G Q LAL
Sbjct: 254 -VMEELHL-EEEMRCHNMECVNMRRKGSQFLAL 284


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