BLASTX nr result
ID: Jatropha_contig00017740
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00017740
(219 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002525397.1| Signal recognition particle receptor subunit... 70 3e-10
gb|ESQ40477.1| hypothetical protein EUTSA_v10014432mg [Eutrema s... 65 1e-08
ref|XP_002300699.1| predicted protein [Populus trichocarpa] 62 6e-08
gb|ERP63968.1| hypothetical protein POPTR_0002s02250g [Populus t... 62 9e-08
gb|EMJ10655.1| hypothetical protein PRUPE_ppa009762mg [Prunus pe... 59 6e-07
ref|XP_002873217.1| signal recognition particle binding protein ... 58 1e-06
ref|XP_006288480.1| hypothetical protein CARUB_v10001748mg [Caps... 56 4e-06
gb|ESR51566.1| hypothetical protein CICLE_v10032463mg [Citrus cl... 56 5e-06
ref|NP_196186.1| signal recognition particle receptor subunit be... 56 5e-06
gb|EOY25235.1| Signal recognition particle receptor subunit beta... 55 9e-06
gb|EOY25233.1| Signal recognition particle receptor subunit beta... 55 9e-06
ref|XP_002265544.2| PREDICTED: signal recognition particle recep... 55 9e-06
>ref|XP_002525397.1| Signal recognition particle receptor subunit beta, putative
[Ricinus communis] gi|223535360|gb|EEF37035.1| Signal
recognition particle receptor subunit beta, putative
[Ricinus communis]
Length = 259
Score = 69.7 bits (169), Expect = 3e-10
Identities = 39/66 (59%), Positives = 45/66 (68%)
Frame = +1
Query: 1 KNEAKQWLQHGIEYANQIEWLQQGIEYANKIPPTQLYGRSACLWLVTIFFLLMIRLFQRT 180
KNEAKQWLQ QGIE+AN+IPP QLY +A L L+T FLL+IR F+RT
Sbjct: 8 KNEAKQWLQ-------------QGIEFANQIPPAQLYAAAAVL-LITTLFLLIIRFFRRT 53
Query: 181 KSNTIV 198
KSNTIV
Sbjct: 54 KSNTIV 59
>gb|ESQ40477.1| hypothetical protein EUTSA_v10014432mg [Eutrema salsugineum]
Length = 260
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = +1
Query: 55 EWLQQGIEYANKIPPTQLYGRSACLWLVTIFFLLMIRLFQRTKSNTIV 198
+W QGIEY KIPPTQLY L L TI FLL IRLF+RTKSNT++
Sbjct: 13 QWSHQGIEYLQKIPPTQLYVAIGVLLLTTILFLLSIRLFRRTKSNTVL 60
>ref|XP_002300699.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/48 (66%), Positives = 37/48 (77%)
Frame = +1
Query: 55 EWLQQGIEYANKIPPTQLYGRSACLWLVTIFFLLMIRLFQRTKSNTIV 198
+WLQQGIEYA+++PPTQLY A L L T LL IRL +RTKSNTIV
Sbjct: 13 QWLQQGIEYAHQLPPTQLYAAVAVL-LFTTLLLLTIRLLKRTKSNTIV 59
>gb|ERP63968.1| hypothetical protein POPTR_0002s02250g [Populus trichocarpa]
gi|550344110|gb|ERP63969.1| hypothetical protein
POPTR_0002s02250g [Populus trichocarpa]
gi|550344111|gb|EEE79972.2| hypothetical protein
POPTR_0002s02250g [Populus trichocarpa]
Length = 258
Score = 61.6 bits (148), Expect = 9e-08
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +1
Query: 55 EWLQQGIEYANKIPPTQLYGRSACLWLVTIFFLLMIRLFQRTKSNTIV 198
+WLQQGIEYA+++PPTQLY A L L T LL IR+ +RTKSNTIV
Sbjct: 13 QWLQQGIEYAHQLPPTQLYAAVAVL-LFTTLLLLTIRMLKRTKSNTIV 59
>gb|EMJ10655.1| hypothetical protein PRUPE_ppa009762mg [Prunus persica]
Length = 279
Score = 58.9 bits (141), Expect = 6e-07
Identities = 25/66 (37%), Positives = 43/66 (65%)
Frame = +1
Query: 1 KNEAKQWLQHGIEYANQIEWLQQGIEYANKIPPTQLYGRSACLWLVTIFFLLMIRLFQRT 180
K +A++W +E+ +W Q +EY +++PP Q+Y A L + T F L+++RLF+R
Sbjct: 15 KKQAEKWSSQALEHIQAEKWSSQALEYIHQVPPEQIYAAIAIL-IFTSFLLILVRLFKRP 73
Query: 181 KSNTIV 198
K+NTI+
Sbjct: 74 KANTIL 79
>ref|XP_002873217.1| signal recognition particle binding protein [Arabidopsis lyrata
subsp. lyrata] gi|297319054|gb|EFH49476.1| signal
recognition particle binding protein [Arabidopsis lyrata
subsp. lyrata]
Length = 260
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = +1
Query: 55 EWLQQGIEYANKIPPTQLYGRSACLWLVTIFFLLMIRLFQRTKSNTIV 198
+W QGIEY KIPPTQLY L TI L IRL +RTKSNT++
Sbjct: 13 QWSHQGIEYLQKIPPTQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVL 60
>ref|XP_006288480.1| hypothetical protein CARUB_v10001748mg [Capsella rubella]
gi|482557186|gb|EOA21378.1| hypothetical protein
CARUB_v10001748mg [Capsella rubella]
Length = 260
Score = 56.2 bits (134), Expect = 4e-06
Identities = 26/48 (54%), Positives = 31/48 (64%)
Frame = +1
Query: 55 EWLQQGIEYANKIPPTQLYGRSACLWLVTIFFLLMIRLFQRTKSNTIV 198
+W QGIEY KIPP+QLY L TI L IRL +RTKSNT++
Sbjct: 13 QWSHQGIEYLQKIPPSQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVL 60
>gb|ESR51566.1| hypothetical protein CICLE_v10032463mg [Citrus clementina]
Length = 263
Score = 55.8 bits (133), Expect = 5e-06
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +1
Query: 55 EWLQQGIEYANKIPPTQLYGRSACLWLVTIFFLLMIRLFQRTKSNTIV 198
EWL +GIE+ N+IPPTQLY A L L+T LL++++F+R KSNTIV
Sbjct: 17 EWLNRGIEFINQIPPTQLYIACAVL-LLTTALLLLLQVFRRKKSNTIV 63
>ref|NP_196186.1| signal recognition particle receptor subunit beta [Arabidopsis
thaliana] gi|42573277|ref|NP_974735.1| signal
recognition particle receptor subunit beta [Arabidopsis
thaliana] gi|9759092|dbj|BAB09661.1| signal recognition
particle receptor beta subunit-like protein [Arabidopsis
thaliana] gi|53850473|gb|AAU95413.1| At5g05670
[Arabidopsis thaliana] gi|55167918|gb|AAV43791.1|
At5g05670 [Arabidopsis thaliana]
gi|222423478|dbj|BAH19709.1| AT5G05670 [Arabidopsis
thaliana] gi|222423982|dbj|BAH19952.1| AT5G05670
[Arabidopsis thaliana] gi|332003523|gb|AED90906.1|
signal recognition particle receptor subunit beta
[Arabidopsis thaliana] gi|332003524|gb|AED90907.1|
signal recognition particle receptor subunit beta
[Arabidopsis thaliana]
Length = 260
Score = 55.8 bits (133), Expect = 5e-06
Identities = 26/48 (54%), Positives = 30/48 (62%)
Frame = +1
Query: 55 EWLQQGIEYANKIPPTQLYGRSACLWLVTIFFLLMIRLFQRTKSNTIV 198
+W QGIEY KIPP QLY L TI L IRL +RTKSNT++
Sbjct: 13 QWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVL 60
>gb|EOY25235.1| Signal recognition particle receptor subunit beta isoform 3
[Theobroma cacao]
Length = 272
Score = 55.1 bits (131), Expect = 9e-06
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 1 KNEAKQWLQHGIEYANQIE-WLQQGIEYANKIPPTQLYGRSACLWLVTIFFLLMIRLFQR 177
K++ +Q + NQ+E WL Q IE+ N+IPP QLY A L LV+ LL LF+R
Sbjct: 8 KDQLEQLKSQLEPWKNQLEQWLHQAIEFLNQIPPIQLYAAVAVL-LVSTLLLLSFHLFKR 66
Query: 178 TKSNTIV 198
TKSN+IV
Sbjct: 67 TKSNSIV 73
>gb|EOY25233.1| Signal recognition particle receptor subunit beta isoform 1
[Theobroma cacao] gi|508777978|gb|EOY25234.1| Signal
recognition particle receptor subunit beta isoform 1
[Theobroma cacao]
Length = 273
Score = 55.1 bits (131), Expect = 9e-06
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 1 KNEAKQWLQHGIEYANQIE-WLQQGIEYANKIPPTQLYGRSACLWLVTIFFLLMIRLFQR 177
K++ +Q + NQ+E WL Q IE+ N+IPP QLY A L LV+ LL LF+R
Sbjct: 8 KDQLEQLKSQLEPWKNQLEQWLHQAIEFLNQIPPIQLYAAVAVL-LVSTLLLLSFHLFKR 66
Query: 178 TKSNTIV 198
TKSN+IV
Sbjct: 67 TKSNSIV 73
>ref|XP_002265544.2| PREDICTED: signal recognition particle receptor subunit beta-like
[Vitis vinifera] gi|297739076|emb|CBI28565.3| unnamed
protein product [Vitis vinifera]
Length = 259
Score = 55.1 bits (131), Expect = 9e-06
Identities = 27/48 (56%), Positives = 37/48 (77%)
Frame = +1
Query: 55 EWLQQGIEYANKIPPTQLYGRSACLWLVTIFFLLMIRLFQRTKSNTIV 198
+W +QG E+ +++P TQLY A ++ VT FFLL IRLF+RTKSNT+V
Sbjct: 13 QWSRQGAEWFHQMPETQLYAAIAVVF-VTTFFLLSIRLFKRTKSNTVV 59