BLASTX nr result
ID: Jatropha_contig00017561
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00017561
(639 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 138 2e-52
gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t... 115 2e-51
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 117 7e-50
gb|EMJ14194.1| hypothetical protein PRUPE_ppa022768mg, partial [... 115 5e-48
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera] 109 6e-48
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe... 108 4e-47
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 108 9e-47
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta... 117 2e-46
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 114 3e-46
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe... 113 4e-46
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 114 1e-45
gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [... 107 1e-45
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 105 2e-45
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 110 3e-45
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 119 3e-45
gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 119 3e-45
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 114 4e-45
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 114 4e-45
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 105 4e-45
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 115 8e-45
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 138 bits (348), Expect(2) = 2e-52
Identities = 63/107 (58%), Positives = 82/107 (76%)
Frame = +1
Query: 1 VLINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRL 180
V++NG+ +GPIIP RGLRQG PLSPYLF++C+EGLS+L AE G+I G +IC+ AP +
Sbjct: 1041 VILNGEKIGPIIPGRGLRQGDPLSPYLFIICAEGLSSLIRQAEGSGTISGAKICKNAPII 1100
Query: 181 SHLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
SHLLFADD FFKAK+ +A + NIL YE++SG +N QKS VF+
Sbjct: 1101 SHLLFADDCFLFFKAKSGQAQGMKNILEMYESSSGQSINFQKSEVFY 1147
Score = 94.4 bits (233), Expect(2) = 2e-52
Identities = 44/102 (43%), Positives = 71/102 (69%)
Frame = +2
Query: 317 FFSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTH 496
F+S NVD VK I IL V Q + G+YLG+PS+VGR++ + F F+++R+ K I W+
Sbjct: 1146 FYSRNVDDAVKASISQILGVQQVMGTGKYLGVPSMVGRSRISTFKFVKERVWKKINSWSS 1205
Query: 497 RLLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMN 622
+ LS+AG+E +IK+V Q+IP Y MS F +P S +++++++
Sbjct: 1206 KCLSQAGRETLIKSVLQSIPFYIMSIFAIPKSIIVDIEKMLS 1247
>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
Length = 405
Score = 115 bits (287), Expect(2) = 2e-51
Identities = 53/107 (49%), Positives = 78/107 (72%)
Frame = +2
Query: 317 FFSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTH 496
FFS N+ +E + I+ V + G+YLGLPS++ R+K +VFSF++D + K I W
Sbjct: 110 FFSRNMSGAAQEDLSRIIGVRHVMGTGKYLGLPSMIDRDKWSVFSFIKDSIWKRINVWRG 169
Query: 497 RLLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWWG 637
R LS+AGKEVMIK+V Q+IPSY MS +LLPSS +++++++N+FWWG
Sbjct: 170 RALSKAGKEVMIKSVLQSIPSYIMSIYLLPSSVIDDIEKMVNAFWWG 216
Score = 114 bits (285), Expect(2) = 2e-51
Identities = 58/100 (58%), Positives = 68/100 (68%)
Frame = +1
Query: 22 VGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRLSHLLFAD 201
VGPI+P RGLRQG PLSPYLF+L EGLS L G IHG ++CR AP +SHLLFAD
Sbjct: 12 VGPIVPGRGLRQGDPLSPYLFILVVEGLSTLIHKEVNRGDIHGVKVCRGAPVVSHLLFAD 71
Query: 202 DSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
+ F +A EA + IL+ YEAASG +NL KS VFF
Sbjct: 72 NCFLFCRANVVEAQRLLTILKTYEAASGQEINLSKSEVFF 111
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 117 bits (293), Expect(2) = 7e-50
Identities = 57/105 (54%), Positives = 72/105 (68%)
Frame = +1
Query: 7 INGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRLSH 186
+NG G + PSRGLRQG P+SPYLFLLC++ S L + A + IHG +ICR AP +SH
Sbjct: 622 VNGVVEGSLSPSRGLRQGDPISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSH 681
Query: 187 LLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
L FADDS+ F KA E + VA+I+ +YE ASG VNL K+ V F
Sbjct: 682 LFFADDSILFTKASVQECSMVADIISKYERASGQQVNLSKTEVVF 726
Score = 106 bits (265), Expect(2) = 7e-50
Identities = 49/106 (46%), Positives = 73/106 (68%)
Frame = +2
Query: 320 FSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTHR 499
FS +VD + I+N+L V + +YLGLP+++GR+KK F+ +++R+ K + W +
Sbjct: 726 FSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEK 785
Query: 500 LLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWWG 637
LLSR GKEV+IK+VAQAIP+Y MS F LPS +E+ ++ FWWG
Sbjct: 786 LLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEIHSLLARFWWG 831
>gb|EMJ14194.1| hypothetical protein PRUPE_ppa022768mg, partial [Prunus persica]
Length = 887
Score = 115 bits (288), Expect(2) = 5e-48
Identities = 60/106 (56%), Positives = 69/106 (65%)
Frame = +1
Query: 4 LINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRLS 183
LING G + PSRGLRQG PLSPYLFL C+EGLS L E+ + G IC+ AP +S
Sbjct: 199 LINGILTGYLHPSRGLRQGDPLSPYLFLFCAEGLSTLIAKKESAWLLKGVTICKEAPSIS 258
Query: 184 HLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
HLLFADDSLFF A +E + IL QYE SG +NL KS V F
Sbjct: 259 HLLFADDSLFFALATVEECQVIRAILAQYEQESGQQLNLMKSSVVF 304
Score = 102 bits (254), Expect(2) = 5e-48
Identities = 49/105 (46%), Positives = 68/105 (64%)
Frame = +2
Query: 320 FSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTHR 499
FSSN+ + + L V Q H RYLG+P+LVGR + A FS+L++R+ K + W +
Sbjct: 304 FSSNIKRPAQLTLAAALGVQQADYHDRYLGMPTLVGRRRSACFSYLKERIMKRLHGWKGK 363
Query: 500 LLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWW 634
LLS AGKE+++K V QAIP Y MS FLLP ++L ++M FWW
Sbjct: 364 LLSGAGKEILLKAVVQAIPLYSMSYFLLPRGFYDDLNKLMAGFWW 408
>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
Length = 1793
Score = 109 bits (272), Expect(2) = 6e-48
Identities = 53/107 (49%), Positives = 69/107 (64%)
Frame = +1
Query: 1 VLINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRL 180
V G+ +GPI P+RGLRQG LSPYLF+L +EGLSAL E G +HG + R AP +
Sbjct: 1172 VXFGGELLGPIYPTRGLRQGDXLSPYLFILAAEGLSALLKQGERCGVLHGCSVARGAPXV 1231
Query: 181 SHLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
SHL FAD+S FFKA E+ ++ IL +Y+ SG +NL K + F
Sbjct: 1232 SHLFFADBSYLFFKATESESRSLKQILLRYQNLSGQEINLNKXALTF 1278
Score = 108 bits (269), Expect(2) = 6e-48
Identities = 50/105 (47%), Positives = 72/105 (68%)
Frame = +2
Query: 320 FSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTHR 499
FS N D +VK I +ILQV + + G YLG+P++VG+NK+ +F F+R ++ I W R
Sbjct: 1278 FSRNTDDVVKRGICSILQVEEQADPGIYLGMPAVVGKNKRQLFEFVRRKVWNRIQNWNGR 1337
Query: 500 LLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWW 634
LSRAGKE+ +KTVAQ+IP+Y M LLP C +++ +MN F+W
Sbjct: 1338 RLSRAGKEICLKTVAQSIPTYVMQLLLLPKDLCRDIESMMNXFFW 1382
>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 108 bits (269), Expect(2) = 4e-47
Identities = 55/106 (51%), Positives = 68/106 (64%)
Frame = +1
Query: 4 LINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRLS 183
L+NG+ + P+RGLRQG PLSPYLFLLC+EG + L + AE G + G ICR AP +S
Sbjct: 1036 LVNGEPTRILYPTRGLRQGDPLSPYLFLLCAEGFTTLLSKAERQGQLQGIVICRGAPTVS 1095
Query: 184 HLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
HL FADDS F KA + + +I YE ASG +N QKS V F
Sbjct: 1096 HLFFADDSFVFAKATDNNCGVLKHIFEVYEHASGQQINCQKSCVAF 1141
Score = 106 bits (265), Expect(2) = 4e-47
Identities = 48/113 (42%), Positives = 74/113 (65%)
Frame = +2
Query: 299 CRNQGFFFSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKA 478
C+ FS+N+ + + ++ ++L V + +H YLGLP ++GRNK F +L++R+ K
Sbjct: 1134 CQKSCVAFSANIHMDTQSRLASVLGVPRVDSHATYLGLPMMLGRNKTVCFRYLKERVWKK 1193
Query: 479 IFRWTHRLLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWWG 637
+ W + LS AGKEV++K VAQ+IP Y MS FLLP C E++++M FWWG
Sbjct: 1194 LQGWREQTLSIAGKEVLLKVVAQSIPLYVMSCFLLPQGLCHEIEQMMARFWWG 1246
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 108 bits (270), Expect(2) = 9e-47
Identities = 50/105 (47%), Positives = 72/105 (68%)
Frame = +2
Query: 320 FSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTHR 499
FS N D +VK I +ILQV + + G YLG+P++VG+NK+ +F F+R ++ I W R
Sbjct: 191 FSRNTDDVVKRGICSILQVEEXADPGIYLGMPAVVGKNKRQLFEFVRRKVWNRIQNWNGR 250
Query: 500 LLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWW 634
LSRAGKE+ +KTVAQ+IP+Y M LLP C +++ +MN F+W
Sbjct: 251 RLSRAGKEICLKTVAQSIPTYVMQLLLLPKDLCRDIESMMNGFFW 295
Score = 105 bits (261), Expect(2) = 9e-47
Identities = 52/107 (48%), Positives = 68/107 (63%)
Frame = +1
Query: 1 VLINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRL 180
V+ G+ +GPI P+RGLRQ PLSPYLF+L +EGLSAL E G +HG + R A +
Sbjct: 85 VVFGGELLGPIYPTRGLRQEDPLSPYLFILAAEGLSALLKQGERCGVLHGCSVARGASTV 144
Query: 181 SHLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
HL FADD FFKA E+ ++ IL +Y+ SG +NL KS + F
Sbjct: 145 LHLFFADDLYLFFKATESESRSLKQILLRYQNLSGQEINLNKSALTF 191
>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 773
Score = 117 bits (294), Expect(2) = 2e-46
Identities = 58/107 (54%), Positives = 72/107 (67%)
Frame = +1
Query: 1 VLINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRL 180
+LINGQ V IIP RG+RQG P+SPYL+LLC+EGLSAL + +HG + R P +
Sbjct: 72 ILINGQPVRRIIPKRGIRQGDPISPYLYLLCTEGLSALIQASIKAKQLHGFKASRNGPAI 131
Query: 181 SHLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
SHLLFA DSL F KA +E + N+L+ YE ASG VN QKS + F
Sbjct: 132 SHLLFAHDSLVFCKATLEECMTLVNVLKLYEKASGQAVNFQKSAILF 178
Score = 95.1 bits (235), Expect(2) = 2e-46
Identities = 45/111 (40%), Positives = 63/111 (56%)
Frame = +2
Query: 302 RNQGFFFSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAI 481
+ F +D EQ+ +L + + GRYLGLP VGRNK FSF+ + + +
Sbjct: 172 QKSAILFGKGLDFRTSEQLSQLLGIYKTEGFGRYLGLPEFVGRNKTNAFSFIAQTMDQKM 231
Query: 482 FRWTHRLLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWW 634
W ++LLS AGKEV+IK++ AIP+Y MS FLLP ++ M FWW
Sbjct: 232 DNWYNKLLSPAGKEVLIKSIVTAIPTYSMSCFLLPMRLIHQITSAMRWFWW 282
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 114 bits (284), Expect(2) = 3e-46
Identities = 57/107 (53%), Positives = 69/107 (64%)
Frame = +1
Query: 1 VLINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRL 180
+ +NG+ P RGLRQG PLSPYLFLLC+EG SAL + E G +HG RIC+ AP +
Sbjct: 873 IRVNGELSESFSPGRGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSV 932
Query: 181 SHLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
SHLLFADDSL +A EA + IL+ YE SG +N KS V F
Sbjct: 933 SHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMF 979
Score = 97.8 bits (242), Expect(2) = 3e-46
Identities = 43/105 (40%), Positives = 68/105 (64%)
Frame = +2
Query: 320 FSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTHR 499
FS N L K ++ L + + + RYLGLP VGR++ +FS+L++R+ + I W +
Sbjct: 979 FSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 1038
Query: 500 LLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWW 634
LLSRAGKE++IK VAQAIP++ M F L C+++ +++ +WW
Sbjct: 1039 LLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWW 1083
>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 113 bits (283), Expect(2) = 4e-46
Identities = 54/108 (50%), Positives = 72/108 (66%)
Frame = +1
Query: 4 LINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRLS 183
++NG VG +IP RGLRQG PLSPYLFLLC+E LS+L AE +HG +CR AP +S
Sbjct: 981 MLNGNPVGYVIPQRGLRQGDPLSPYLFLLCAEALSSLILQAERRNLLHGVNLCRGAPSVS 1040
Query: 184 HLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFFQL 327
HL FADDS F +A + ++ I ++YE SG ++L+KS V F +
Sbjct: 1041 HLFFADDSFLFLRADQQDCEQLSIIFQKYEMVSGQKIHLEKSCVSFSI 1088
Score = 97.8 bits (242), Expect(2) = 4e-46
Identities = 45/105 (42%), Positives = 70/105 (66%)
Frame = +2
Query: 320 FSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTHR 499
FS N+D ++ + +L V + H YLGLP+ VGR+++ F+ L++R+ K I W +
Sbjct: 1086 FSINMDRTDQDNLAAVLGVRRVDQHDVYLGLPTHVGRSRRQCFNSLKERIWKKIQGWKAK 1145
Query: 500 LLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWW 634
LLS AGKE+++K VAQA+P Y M+ FL+P C E+Q++M +WW
Sbjct: 1146 LLSFAGKEILLKVVAQAVPIYMMNCFLIPKCLCNEIQQVMARYWW 1190
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 114 bits (284), Expect(2) = 1e-45
Identities = 57/107 (53%), Positives = 69/107 (64%)
Frame = +1
Query: 1 VLINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRL 180
+ +NG+ P RGLRQG PLSPYLFLLC+EG SAL + E G +HG RIC+ AP +
Sbjct: 846 IRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSV 905
Query: 181 SHLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
SHLLFADDSL +A EA + IL+ YE SG +N KS V F
Sbjct: 906 SHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMF 952
Score = 95.9 bits (237), Expect(2) = 1e-45
Identities = 42/105 (40%), Positives = 68/105 (64%)
Frame = +2
Query: 320 FSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTHR 499
FS N L K ++ L + + + +YLGLP VGR++ +FS+L++R+ + I W +
Sbjct: 952 FSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 1011
Query: 500 LLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWW 634
LLSRAGKE++IK VAQAIP++ M F L C+++ +++ +WW
Sbjct: 1012 LLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWW 1056
>gb|EMJ04900.1| hypothetical protein PRUPE_ppa020995mg, partial [Prunus persica]
Length = 1367
Score = 107 bits (267), Expect(2) = 1e-45
Identities = 51/106 (48%), Positives = 68/106 (64%)
Frame = +1
Query: 4 LINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRLS 183
++NG VG +IP RGLRQG PLSPYLFLLC+E LS+L AE +HG +CR AP +S
Sbjct: 867 MLNGNPVGYVIPQRGLRQGDPLSPYLFLLCAEALSSLILQAERRNLLHGVNLCRGAPSVS 926
Query: 184 HLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
HL F DD F +A + ++ I ++YE G ++L+KS V F
Sbjct: 927 HLFFTDDRFLFLRANQQDCEQLSIIFQKYEMVLGQKIHLEKSCVSF 972
Score = 102 bits (254), Expect(2) = 1e-45
Identities = 45/106 (42%), Positives = 73/106 (68%)
Frame = +2
Query: 320 FSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTHR 499
FS+N+D ++ + +L+V + H YLGLP+ VGR+++ F+ L++R+ K I W +
Sbjct: 972 FSNNMDRTDQDNLAAVLEVKRVDQHDVYLGLPTHVGRSRRQCFNSLKERIWKKIQGWKAK 1031
Query: 500 LLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWWG 637
LLS AGKE+++K VAQ +P Y M+ FL+P C+E+Q++M +WWG
Sbjct: 1032 LLSFAGKEILLKVVAQVVPIYMMNCFLIPKCLCDEIQQVMARYWWG 1077
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 105 bits (261), Expect(2) = 2e-45
Identities = 48/106 (45%), Positives = 67/106 (63%)
Frame = +1
Query: 4 LINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRLS 183
+ING G ++P+RGLRQG PLSPYLF++ ++ S + +HG + R+ P +S
Sbjct: 622 IINGSVCGSVVPARGLRQGDPLSPYLFIMVADAFSKMIQRKVQDKQLHGAKASRSGPEIS 681
Query: 184 HLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
HL FADDSL F +A E T + +IL QYE ASG +N +KS V +
Sbjct: 682 HLFFADDSLLFTRANRQECTIIVDILNQYELASGQKINYEKSEVSY 727
Score = 104 bits (259), Expect(2) = 2e-45
Identities = 49/106 (46%), Positives = 70/106 (66%)
Frame = +2
Query: 320 FSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTHR 499
+S V V K+++ NIL + Q H +YLG+PS+ GR+KKA+F L DR+ K + W +
Sbjct: 727 YSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQGWKEK 786
Query: 500 LLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWWG 637
LLSRAGKEV++K+V QAIP+Y M + P +++Q M FWWG
Sbjct: 787 LLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQKIQSAMARFWWG 832
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 110 bits (276), Expect(2) = 3e-45
Identities = 58/107 (54%), Positives = 68/107 (63%)
Frame = +1
Query: 1 VLINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRL 180
VL+ G G I PSRGLRQG P+SPYLFL+ +EGLSAL AE IHG I R AP +
Sbjct: 905 VLLQGAPFGKIKPSRGLRQGDPISPYLFLIVAEGLSALIRKAEREQQIHGVAIARGAPSV 964
Query: 181 SHLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
SHL +ADDSL F A + A+ NI YEAASG +N KS + F
Sbjct: 965 SHLFYADDSLLFCDATVTDCMALKNIFSTYEAASGQKINKDKSAICF 1011
Score = 97.8 bits (242), Expect(2) = 3e-45
Identities = 48/106 (45%), Positives = 67/106 (63%)
Frame = +2
Query: 320 FSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTHR 499
FS +KE IL + H RYLGLP++ G++KK +F L DR+ + W +
Sbjct: 1011 FSPKSPAAIKEACSAILDMPVVPCHERYLGLPTVSGKDKKKLFQSLPDRVWNRVHGWEGK 1070
Query: 500 LLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWWG 637
LLS+AGKEV+IKTVAQAIP+Y MS F LP+ + + + + + FWWG
Sbjct: 1071 LLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVARFWWG 1116
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 119 bits (298), Expect(2) = 3e-45
Identities = 59/111 (53%), Positives = 74/111 (66%)
Frame = +1
Query: 1 VLINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRL 180
V ING+ P++PSRG+RQG P+SPYLFLLC+EGLS L E G + G + R P +
Sbjct: 632 VKINGELTKPVVPSRGIRQGDPISPYLFLLCTEGLSCLLHKKEVAGELQGIKNGRHGPPI 691
Query: 181 SHLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFFQL*C 333
SHLLFADDS+FF KA + A+ N LR Y +ASG +NL KS +FF C
Sbjct: 692 SHLLFADDSIFFAKADSRNVQALKNTLRSYCSASGQKINLHKSSIFFGKRC 742
Score = 89.4 bits (220), Expect(2) = 3e-45
Identities = 45/107 (42%), Positives = 61/107 (57%)
Frame = +2
Query: 317 FFSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTH 496
FF VK + + LQV + YLG+P+ +G F FL +R+ K + WT
Sbjct: 737 FFGKRCPDAVKISVKSCLQVDNEVLQDSYLGMPTEIGLATTNFFKFLPERIWKRVNGWTD 796
Query: 497 RLLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWWG 637
R LSRAG E M+K VAQAIP+Y MS F +P S CE+++ + WWG
Sbjct: 797 RPLSRAGMETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWG 843
>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
protein OsJ_32156 [Oryza sativa Japonica Group]
Length = 1339
Score = 119 bits (298), Expect(2) = 3e-45
Identities = 59/111 (53%), Positives = 74/111 (66%)
Frame = +1
Query: 1 VLINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRL 180
V ING+ P++PSRG+RQG P+SPYLFLLC+EGLS L E G + G + R P +
Sbjct: 589 VKINGELTKPVVPSRGIRQGDPISPYLFLLCTEGLSCLLHKKEVAGELQGIKNGRHGPPI 648
Query: 181 SHLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFFQL*C 333
SHLLFADDS+FF KA + A+ N LR Y +ASG +NL KS +FF C
Sbjct: 649 SHLLFADDSIFFAKADSRNVQALKNTLRSYCSASGQKINLHKSSIFFGKRC 699
Score = 89.4 bits (220), Expect(2) = 3e-45
Identities = 45/107 (42%), Positives = 61/107 (57%)
Frame = +2
Query: 317 FFSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTH 496
FF VK + + LQV + YLG+P+ +G F FL +R+ K + WT
Sbjct: 694 FFGKRCPDAVKISVKSCLQVDNEVLQDSYLGMPTEIGLATTNFFKFLPERIWKRVNGWTD 753
Query: 497 RLLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWWG 637
R LSRAG E M+K VAQAIP+Y MS F +P S CE+++ + WWG
Sbjct: 754 RPLSRAGMETMLKAVAQAIPNYVMSCFRIPVSICEKMKTCIADHWWG 800
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 114 bits (284), Expect(2) = 4e-45
Identities = 57/107 (53%), Positives = 69/107 (64%)
Frame = +1
Query: 1 VLINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRL 180
+ +NG+ P RGLRQG PLSPYLFLLC+EG SAL + E G +HG RIC+ AP +
Sbjct: 818 IRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSV 877
Query: 181 SHLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
SHLLFADDSL +A EA + IL+ YE SG +N KS V F
Sbjct: 878 SHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMF 924
Score = 94.4 bits (233), Expect(2) = 4e-45
Identities = 41/105 (39%), Positives = 67/105 (63%)
Frame = +2
Query: 320 FSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTHR 499
FS N L K ++ L + + + +YLGLP VGR++ +FS+L++R+ + I W +
Sbjct: 924 FSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 983
Query: 500 LLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWW 634
LLSRAGKE++IK VAQ IP++ M F L C+++ +++ +WW
Sbjct: 984 LLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWW 1028
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 114 bits (284), Expect(2) = 4e-45
Identities = 57/107 (53%), Positives = 69/107 (64%)
Frame = +1
Query: 1 VLINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRL 180
+ +NG+ P RGLRQG PLSPYLFLLC+EG SAL + E G +HG RIC+ AP +
Sbjct: 814 IRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSV 873
Query: 181 SHLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
SHLLFADDSL +A EA + IL+ YE SG +N KS V F
Sbjct: 874 SHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMF 920
Score = 94.4 bits (233), Expect(2) = 4e-45
Identities = 41/105 (39%), Positives = 67/105 (63%)
Frame = +2
Query: 320 FSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTHR 499
FS N L K ++ L + + + +YLGLP VGR++ +FS+L++R+ + I W +
Sbjct: 920 FSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 979
Query: 500 LLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWW 634
LLSRAGKE++IK VAQ IP++ M F L C+++ +++ +WW
Sbjct: 980 LLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWW 1024
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 105 bits (263), Expect(2) = 4e-45
Identities = 52/112 (46%), Positives = 68/112 (60%)
Frame = +1
Query: 4 LINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRLS 183
+ING+ G + PSRGLRQG PLSP+LF+L ++ S + IHG + R P +S
Sbjct: 625 IINGRVCGSVTPSRGLRQGDPLSPFLFILVADAFSQMVKQKVVSKEIHGAKASRNGPEIS 684
Query: 184 HLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFFQL*CGC 339
HLLFADDSL F +A E + +IL +YEAASG +N +KS V F C
Sbjct: 685 HLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGVSC 736
Score = 102 bits (254), Expect(2) = 4e-45
Identities = 49/106 (46%), Positives = 68/106 (64%)
Frame = +2
Query: 320 FSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTHR 499
FS V KE++I +L + Q H +YLG+P+L GR+KK +F L DR+ K + W +
Sbjct: 730 FSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEK 789
Query: 500 LLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWWG 637
LLSRAGKEV+IK V QA+P+Y M + LP + +E+ M FWWG
Sbjct: 790 LLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWG 835
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 115 bits (287), Expect(2) = 8e-45
Identities = 56/106 (52%), Positives = 75/106 (70%)
Frame = +1
Query: 4 LINGQTVGPIIPSRGLRQGYPLSPYLFLLCSEGLSALFTHAEAVGSIHGGRICRAAPRLS 183
LING G ++PSRGLRQG PLSPYLF+LC+E LS L A+ G + G R+ R +P+++
Sbjct: 559 LINGSPQGSVVPSRGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGVMVGIRVARGSPQVN 618
Query: 184 HLLFADDSLFFFKAKADEATAVANILRQYEAASGHGVNLQKSGVFF 321
HLLFADD++FF K A++NIL++YE ASG +NL KS + F
Sbjct: 619 HLLFADDTMFFCKTNPTCCGALSNILKKYELASGQSINLAKSAITF 664
Score = 92.0 bits (227), Expect(2) = 8e-45
Identities = 41/105 (39%), Positives = 65/105 (61%)
Frame = +2
Query: 320 FSSNVDVLVKEQIINILQVSQPLNHGRYLGLPSLVGRNKKAVFSFLRDRLRKAIFRWTHR 499
FSS +K ++ L++ G+YLGLP GR K+ +FS + DR+R+ W+ R
Sbjct: 664 FSSKTPQDIKRRVKLSLRIDNEGGIGKYLGLPEHFGRRKRDIFSSIVDRIRQRSHSWSIR 723
Query: 500 LLSRAGKEVMIKTVAQAIPSYCMSTFLLPSSSCEELQRIMNSFWW 634
LS AGK++++K V ++PSY M F LP+S C+++Q ++ FWW
Sbjct: 724 FLSSAGKQILLKAVLSSMPSYAMMCFKLPASLCKQIQSVLTRFWW 768