BLASTX nr result
ID: Jatropha_contig00017401
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00017401
(463 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83352.1| hypothetical protein VITISV_022160 [Vitis vinifera] 106 3e-31
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr... 102 8e-31
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera] 105 1e-30
emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera] 105 2e-30
gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 105 1e-29
gb|AAC02666.1| polyprotein [Arabidopsis thaliana] 103 4e-29
gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 103 4e-29
gb|AAC02669.1| polyprotein [Arabidopsis thaliana] 103 4e-29
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera] 104 4e-29
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 105 5e-29
dbj|BAM44534.1| polyprotein [Arabidopsis thaliana] 105 5e-29
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 105 5e-29
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 105 5e-29
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|... 105 5e-29
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 105 5e-29
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana] 105 5e-29
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana] 105 5e-29
dbj|BAM44529.1| polyprotein [Arabidopsis thaliana] 105 5e-29
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 105 5e-29
emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera] 102 7e-29
>emb|CAN83352.1| hypothetical protein VITISV_022160 [Vitis vinifera]
Length = 1087
Score = 106 bits (264), Expect(2) = 3e-31
Identities = 49/92 (53%), Positives = 61/92 (66%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L E VYM+QPPGF P++VC+L A+YGLRQAPR WY ALR + GF +SK+D
Sbjct: 726 GTLTETVYMMQPPGFKDTSKPDHVCQLRKAIYGLRQAPRAWYTALRTALFQLGFKNSKAD 785
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSII 276
SLFI T + YF YVDDL++TGN +
Sbjct: 786 SSLFIYTHGPIICYFLVYVDDLVITGNDIQFV 817
Score = 54.7 bits (130), Expect(2) = 3e-31
Identities = 30/60 (50%), Positives = 35/60 (58%)
Frame = +2
Query: 278 EQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPVSTP 457
+ I L FSLKD L FL +++ T GLFL+QH YI LL NM GAK VSTP
Sbjct: 818 DHIIQKLGEIFSLKDMGNLSFFLGVEVIPTRAGLFLSQHQYIRDLLSTTNMLGAKDVSTP 877
>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
polyprotein from Arabidopsis arenosa [Arabidopsis
thaliana]
Length = 1194
Score = 102 bits (253), Expect(2) = 8e-31
Identities = 48/98 (48%), Positives = 66/98 (67%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L E+VY+ QPPGF++PD PNYVC L AL+GL+QAPR WYQ LR + GF +S ++
Sbjct: 1015 GRLTEDVYVAQPPGFINPDRPNYVCHLKKALHGLKQAPRAWYQELRGFLLTCGFTNSVAN 1074
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSIIRAIYWC 294
SLFI ++ Y YVDD L+TG+++++I C
Sbjct: 1075 TSLFIRQHNKDYIYILVYVDDFLITGSNSNLIAQFITC 1112
Score = 57.4 bits (137), Expect(2) = 8e-31
Identities = 32/62 (51%), Positives = 37/62 (59%)
Frame = +2
Query: 272 LFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPVS 451
L QFI L N+FSLKD +L FLEI+ +T GL L Q Y+L LL M AK VS
Sbjct: 1105 LIAQFITCLANRFSLKDLGQLSYFLEIEATRTKAGLHLMQRRYVLDLLTKTKMLDAKTVS 1164
Query: 452 TP 457
TP
Sbjct: 1165 TP 1166
>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
Length = 1172
Score = 105 bits (263), Expect(2) = 1e-30
Identities = 48/92 (52%), Positives = 66/92 (71%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L E VYM QPPGF+ D+P++VCKL A+YGL+QAPR WYQ LR+ ++FGF +S +D
Sbjct: 772 GTLTEHVYMTQPPGFIDQDSPSHVCKLKKAIYGLKQAPRAWYQELRSFLLQFGFTNSHAD 831
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSII 276
SLF+L + YF YVDDL++TG+ ++
Sbjct: 832 TSLFVLKFRGHLVYFLVYVDDLIITGDDEHLV 863
Score = 52.8 bits (125), Expect(2) = 1e-30
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +2
Query: 272 LFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPVS 451
L ++I +L N+FSLKD +L FL ++I + G L+Q Y+L LL +M AKPV
Sbjct: 862 LVNRYIHLLANRFSLKDLGKLSYFLGVEIVPNSQGFLLSQRRYLLDLLARTHMSEAKPVQ 921
Query: 452 TP 457
TP
Sbjct: 922 TP 923
>emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]
Length = 1442
Score = 105 bits (261), Expect(2) = 2e-30
Identities = 48/92 (52%), Positives = 60/92 (65%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L E VYM+QPPGF P++VC+L A+YGLRQAPR WY LR + GF +SK+D
Sbjct: 982 GTLTETVYMMQPPGFKDTSKPDHVCRLRKAIYGLRQAPRAWYTTLRTALFQLGFKNSKAD 1041
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSII 276
SLFI T + YF YVDDL++TGN +
Sbjct: 1042 SSLFIYTHGPIICYFLVYVDDLVITGNDIQFV 1073
Score = 53.1 bits (126), Expect(2) = 2e-30
Identities = 29/60 (48%), Positives = 34/60 (56%)
Frame = +2
Query: 278 EQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPVSTP 457
+ I L FSLKD FL +++ T GLFL+QH YI LL NM GAK VSTP
Sbjct: 1074 DHIIQKLGENFSLKDMGNHSFFLGVEVIPTRAGLFLSQHQYIRDLLSTTNMLGAKDVSTP 1133
>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
Length = 1390
Score = 105 bits (263), Expect(2) = 1e-29
Identities = 50/92 (54%), Positives = 67/92 (72%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L +EVY++QPPGFV DNP++VC+L ALYGL+QAPR WYQ LR+ + GF +S +D
Sbjct: 1054 GTLSDEVYVMQPPGFVDKDNPHHVCRLHKALYGLKQAPRAWYQELRSYLLTQGFVNSIAD 1113
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSII 276
SLF L + + Y YVDD+L+TG+ T+II
Sbjct: 1114 TSLFTLRHKRTILYVLVYVDDMLITGSDTNII 1145
Score = 49.7 bits (117), Expect(2) = 1e-29
Identities = 28/62 (45%), Positives = 36/62 (58%)
Frame = +2
Query: 272 LFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPVS 451
+ +FI L +FSLKD E+ FL I+ +T+ GL L Q Y+L LL NM A PV
Sbjct: 1144 IITRFIANLAARFSLKDLGEMSYFLGIEATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVL 1203
Query: 452 TP 457
TP
Sbjct: 1204 TP 1205
>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 103 bits (258), Expect(2) = 4e-29
Identities = 49/92 (53%), Positives = 66/92 (71%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L +EVY+ QPPGFV DN ++VC+L ALYGL+QAPR WYQ LR+ + GF +S +D
Sbjct: 1058 GTLSDEVYVTQPPGFVDKDNAHHVCRLYKALYGLKQAPRAWYQELRSYLLTQGFVNSVAD 1117
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSII 276
SLF L ++ + Y YVDD+L+TG+ T+II
Sbjct: 1118 TSLFTLRHERTILYVLVYVDDMLITGSDTNII 1149
Score = 49.7 bits (117), Expect(2) = 4e-29
Identities = 28/62 (45%), Positives = 36/62 (58%)
Frame = +2
Query: 272 LFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPVS 451
+ +FI L +FSLKD E+ FL I+ +T+ GL L Q Y+L LL NM A PV
Sbjct: 1148 IITRFIANLAARFSLKDLGEMSYFLGIEATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVL 1207
Query: 452 TP 457
TP
Sbjct: 1208 TP 1209
>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 103 bits (258), Expect(2) = 4e-29
Identities = 49/92 (53%), Positives = 66/92 (71%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L +EVY+ QPPGFV DN ++VC+L ALYGL+QAPR WYQ LR+ + GF +S +D
Sbjct: 1058 GTLSDEVYVTQPPGFVDKDNAHHVCRLYKALYGLKQAPRAWYQELRSYLLTQGFVNSVAD 1117
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSII 276
SLF L ++ + Y YVDD+L+TG+ T+II
Sbjct: 1118 TSLFTLRHERTILYVLVYVDDMLITGSDTNII 1149
Score = 49.7 bits (117), Expect(2) = 4e-29
Identities = 28/62 (45%), Positives = 36/62 (58%)
Frame = +2
Query: 272 LFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPVS 451
+ +FI L +FSLKD E+ FL I+ +T+ GL L Q Y+L LL NM A PV
Sbjct: 1148 IITRFIANLAARFSLKDLGEMSYFLGIEATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVL 1207
Query: 452 TP 457
TP
Sbjct: 1208 TP 1209
>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 103 bits (258), Expect(2) = 4e-29
Identities = 49/92 (53%), Positives = 66/92 (71%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L +EVY+ QPPGFV DN ++VC+L ALYGL+QAPR WYQ LR+ + GF +S +D
Sbjct: 1058 GTLSDEVYVTQPPGFVDKDNAHHVCRLYKALYGLKQAPRAWYQELRSYLLTQGFVNSVAD 1117
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSII 276
SLF L ++ + Y YVDD+L+TG+ T+II
Sbjct: 1118 TSLFTLRHERTILYVLVYVDDMLITGSDTNII 1149
Score = 49.7 bits (117), Expect(2) = 4e-29
Identities = 28/62 (45%), Positives = 36/62 (58%)
Frame = +2
Query: 272 LFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPVS 451
+ +FI L +FSLKD E+ FL I+ +T+ GL L Q Y+L LL NM A PV
Sbjct: 1148 IITRFIANLAARFSLKDLGEMSYFLGIEATRTSKGLHLMQKRYVLDLLEKTNMLAAHPVL 1207
Query: 452 TP 457
TP
Sbjct: 1208 TP 1209
>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
Length = 1427
Score = 104 bits (260), Expect(2) = 4e-29
Identities = 52/93 (55%), Positives = 61/93 (65%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L E+VYM QPPG+V NP +VC+L ALYGL+QAPR WY LR + FGF +SK D
Sbjct: 1013 GTLTEDVYMAQPPGYVDQANPTHVCRLQKALYGLKQAPRAWYMELRTFLLTFGFINSKXD 1072
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSIIR 279
SLFI YF YVDDLL+TGN + IR
Sbjct: 1073 TSLFIYQXRSATIYFLVYVDDLLVTGNCSQSIR 1105
Score = 48.9 bits (115), Expect(2) = 4e-29
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +2
Query: 281 QFIGVLRNKFSLKDPRELILFLEID-I*KTAVGLFLTQHHYILQLLLAANMEGAKPVSTP 457
+FI L ++FSLKD L FL ++ T+ G+FL+QH Y+ LL N+EG K STP
Sbjct: 1106 RFIDALAHRFSLKDLGPLSYFLGVEGAISTSDGMFLSQHQYVRDLLAKFNLEGIKDSSTP 1165
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 105 bits (261), Expect(2) = 5e-29
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L +EVYM QPPGFV D P+YVC+L A+YGL+QAPR WY LR + GF +S SD
Sbjct: 1075 GTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISD 1134
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSIIR 279
SLF+L + + + Y YVDD+L+TGN T +++
Sbjct: 1135 TSLFVLQRGRSIIYMLVYVDDILITGNDTVLLK 1167
Score = 48.1 bits (113), Expect(2) = 5e-29
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 269 LLFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPV 448
+L + + L +FS+K+ +L FL I+ + GL L+Q Y L LL NM AKPV
Sbjct: 1164 VLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPV 1223
Query: 449 STPSA 463
+TP A
Sbjct: 1224 ATPMA 1228
>dbj|BAM44534.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 105 bits (261), Expect(2) = 5e-29
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L +EVYM QPPGFV D P+YVC+L A+YGL+QAPR WY LR + GF +S SD
Sbjct: 1075 GTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISD 1134
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSIIR 279
SLF+L + + + Y YVDD+L+TGN T +++
Sbjct: 1135 TSLFVLQRGRSIIYMLVYVDDILITGNDTVLLK 1167
Score = 48.1 bits (113), Expect(2) = 5e-29
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 269 LLFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPV 448
+L + + L +FS+K+ +L FL I+ + GL L+Q Y L LL NM AKPV
Sbjct: 1164 VLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPV 1223
Query: 449 STPSA 463
+TP A
Sbjct: 1224 ATPMA 1228
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 105 bits (261), Expect(2) = 5e-29
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L +EVYM QPPGFV D P+YVC+L A+YGL+QAPR WY LR + GF +S SD
Sbjct: 1075 GTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISD 1134
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSIIR 279
SLF+L + + + Y YVDD+L+TGN T +++
Sbjct: 1135 TSLFVLQRGRSIIYMLVYVDDILITGNDTVLLK 1167
Score = 48.1 bits (113), Expect(2) = 5e-29
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 269 LLFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPV 448
+L + + L +FS+K+ +L FL I+ + GL L+Q Y L LL NM AKPV
Sbjct: 1164 VLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPV 1223
Query: 449 STPSA 463
+TP A
Sbjct: 1224 ATPMA 1228
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 105 bits (261), Expect(2) = 5e-29
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L +EVYM QPPGFV D P+YVC+L A+YGL+QAPR WY LR + GF +S SD
Sbjct: 1075 GTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISD 1134
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSIIR 279
SLF+L + + + Y YVDD+L+TGN T +++
Sbjct: 1135 TSLFVLQRGRSIIYMLVYVDDILITGNDTVLLK 1167
Score = 48.1 bits (113), Expect(2) = 5e-29
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 269 LLFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPV 448
+L + + L +FS+K+ +L FL I+ + GL L+Q Y L LL NM AKPV
Sbjct: 1164 VLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPV 1223
Query: 449 STPSA 463
+TP A
Sbjct: 1224 ATPMA 1228
>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 105 bits (261), Expect(2) = 5e-29
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L +EVYM QPPGFV D P+YVC+L A+YGL+QAPR WY LR + GF +S SD
Sbjct: 1075 GTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISD 1134
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSIIR 279
SLF+L + + + Y YVDD+L+TGN T +++
Sbjct: 1135 TSLFVLQRGRSIIYMLVYVDDILITGNDTVLLK 1167
Score = 48.1 bits (113), Expect(2) = 5e-29
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 269 LLFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPV 448
+L + + L +FS+K+ +L FL I+ + GL L+Q Y L LL NM AKPV
Sbjct: 1164 VLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPV 1223
Query: 449 STPSA 463
+TP A
Sbjct: 1224 ATPMA 1228
>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
transposon [Arabidopsis thaliana]
Length = 1456
Score = 105 bits (261), Expect(2) = 5e-29
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L +EVYM QPPGFV D P+YVC+L A+YGL+QAPR WY LR + GF +S SD
Sbjct: 1056 GTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISD 1115
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSIIR 279
SLF+L + + + Y YVDD+L+TGN T +++
Sbjct: 1116 TSLFVLQRGRSIIYMLVYVDDILITGNDTVLLK 1148
Score = 48.1 bits (113), Expect(2) = 5e-29
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 269 LLFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPV 448
+L + + L +FS+K+ +L FL I+ + GL L+Q Y L LL NM AKPV
Sbjct: 1145 VLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPV 1204
Query: 449 STPSA 463
+TP A
Sbjct: 1205 ATPMA 1209
>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 105 bits (261), Expect(2) = 5e-29
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L +EVYM QPPGFV D P+YVC+L A+YGL+QAPR WY LR + GF +S SD
Sbjct: 1075 GTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISD 1134
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSIIR 279
SLF+L + + + Y YVDD+L+TGN T +++
Sbjct: 1135 TSLFVLQRGRSIIYMLVYVDDILITGNDTVLLK 1167
Score = 48.1 bits (113), Expect(2) = 5e-29
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 269 LLFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPV 448
+L + + L +FS+K+ +L FL I+ + GL L+Q Y L LL NM AKPV
Sbjct: 1164 VLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPV 1223
Query: 449 STPSA 463
+TP A
Sbjct: 1224 ATPMA 1228
>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 105 bits (261), Expect(2) = 5e-29
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L +EVYM QPPGFV D P+YVC+L A+YGL+QAPR WY LR + GF +S SD
Sbjct: 1075 GTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISD 1134
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSIIR 279
SLF+L + + + Y YVDD+L+TGN T +++
Sbjct: 1135 TSLFVLQRGRSIIYMLVYVDDILITGNDTVLLK 1167
Score = 48.1 bits (113), Expect(2) = 5e-29
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 269 LLFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPV 448
+L + + L +FS+K+ +L FL I+ + GL L+Q Y L LL NM AKPV
Sbjct: 1164 VLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPV 1223
Query: 449 STPSA 463
+TP A
Sbjct: 1224 ATPMA 1228
>dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 105 bits (261), Expect(2) = 5e-29
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L +EVYM QPPGFV D P+YVC+L A+YGL+QAPR WY LR + GF +S SD
Sbjct: 1075 GTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISD 1134
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSIIR 279
SLF+L + + + Y YVDD+L+TGN T +++
Sbjct: 1135 TSLFVLQRGRSIIYMLVYVDDILITGNDTVLLK 1167
Score = 48.1 bits (113), Expect(2) = 5e-29
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 269 LLFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPV 448
+L + + L +FS+K+ +L FL I+ + GL L+Q Y L LL NM AKPV
Sbjct: 1164 VLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPV 1223
Query: 449 STPSA 463
+TP A
Sbjct: 1224 ATPMA 1228
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 105 bits (261), Expect(2) = 5e-29
Identities = 49/93 (52%), Positives = 65/93 (69%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L +EVYM QPPGFV D P+YVC+L A+YGL+QAPR WY LR + GF +S SD
Sbjct: 930 GTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISD 989
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSIIR 279
SLF+L + + + Y YVDD+L+TGN T +++
Sbjct: 990 TSLFVLQRGRSIIYMLVYVDDILITGNDTVLLK 1022
Score = 48.1 bits (113), Expect(2) = 5e-29
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 269 LLFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPV 448
+L + + L +FS+K+ +L FL I+ + GL L+Q Y L LL NM AKPV
Sbjct: 1019 VLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPV 1078
Query: 449 STPSA 463
+TP A
Sbjct: 1079 ATPMA 1083
>emb|CAN79182.1| hypothetical protein VITISV_024133 [Vitis vinifera]
Length = 555
Score = 102 bits (255), Expect(2) = 7e-29
Identities = 48/92 (52%), Positives = 61/92 (66%)
Frame = +1
Query: 1 GPLQEEVYMLQPPGFVSPDNPNYVCKLVNALYGLRQAPREWYQALRACAVEFGFHHSKSD 180
G L E V+M QPP FV D+P+YVCKL A+YGL+QAPR WY LR + GF +S SD
Sbjct: 375 GRLSENVFMAQPPSFVDSDHPSYVCKLHKAIYGLKQAPRAWYHKLRQFLLTSGFKNSHSD 434
Query: 181 HSLFILTQDQFVRYFPGYVDDLLLTGNSTSII 276
SLF+ V Y YVDD++LTGNS +++
Sbjct: 435 TSLFVFRSSNHVLYLLIYVDDIILTGNSDTLV 466
Score = 50.1 bits (118), Expect(2) = 7e-29
Identities = 26/62 (41%), Positives = 35/62 (56%)
Frame = +2
Query: 272 LFEQFIGVLRNKFSLKDPRELILFLEIDI*KTAVGLFLTQHHYILQLLLAANMEGAKPVS 451
L Q + L +FSLKD +L FL +++ +G+ L+Q YI LL NM AKPV
Sbjct: 465 LVSQLVDYLAQRFSLKDLGQLSYFLGVEVVPHRLGILLSQRRYIQDLLKQTNMANAKPVL 524
Query: 452 TP 457
TP
Sbjct: 525 TP 526