BLASTX nr result
ID: Jatropha_contig00017341
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00017341
(370 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago ... 101 1e-19
ref|XP_003605642.1| hypothetical protein MTR_4g035260 [Medicago ... 74 2e-16
ref|XP_003606040.1| hypothetical protein MTR_4g051190 [Medicago ... 74 2e-16
ref|XP_003605618.1| Photosystem II reaction center protein M [Me... 55 1e-13
ref|XP_002888366.1| hypothetical protein ARALYDRAFT_894017 [Arab... 64 1e-08
ref|XP_002886862.1| hypothetical protein ARALYDRAFT_893969 [Arab... 64 1e-08
ref|NP_683579.1| uncharacterized protein [Arabidopsis thaliana] ... 63 4e-08
ref|NP_054927.1| hypothetical protein SpolCp017 [Spinacia olerac... 62 1e-07
gb|AFK48586.1| unknown [Medicago truncatula] 59 8e-07
>ref|XP_003616777.1| hypothetical protein MTR_5g084150 [Medicago truncatula]
gi|355518112|gb|AES99735.1| hypothetical protein
MTR_5g084150 [Medicago truncatula]
Length = 187
Score = 101 bits (251), Expect = 1e-19
Identities = 53/93 (56%), Positives = 56/93 (60%)
Frame = -2
Query: 312 FRENKGVISFHGGSVNYWAELDLNQRRHIANEFTVRPH*PLGHRPRKNQFQTY**SMINF 133
F+ K VIS HGGSVN+WAELDLNQRRHIANEFT
Sbjct: 5 FKNTKWVISLHGGSVNFWAELDLNQRRHIANEFT-------------------------- 38
Query: 132 LS*YPTPRGSRIPAASLKERCPEPLDDGGTFAR 34
YPTPRGSRIP ASLKERCP+PLDDG F R
Sbjct: 39 ---YPTPRGSRIPVASLKERCPKPLDDGDEFLR 68
>ref|XP_003605642.1| hypothetical protein MTR_4g035260 [Medicago truncatula]
gi|355506697|gb|AES87839.1| hypothetical protein
MTR_4g035260 [Medicago truncatula]
Length = 142
Score = 73.6 bits (179), Expect(2) = 2e-16
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = -2
Query: 123 YPTPRGSRIPAASLKERCPEPLDDGGTFARPPAYYAHS 10
YPTPRGSRIP ASLKERCP+PLDDGG ARPP YY H+
Sbjct: 105 YPTPRGSRIPVASLKERCPKPLDDGGILARPPFYYVHT 142
Score = 37.4 bits (85), Expect(2) = 2e-16
Identities = 21/33 (63%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -1
Query: 334 LFFSVSGISRE-QGGYIISWRISELLGRAGFEP 239
L+ S I RE Q GYII+W IS+ LGRAGFEP
Sbjct: 72 LYGSPLVIFREHQMGYIIAWWISKFLGRAGFEP 104
>ref|XP_003606040.1| hypothetical protein MTR_4g051190 [Medicago truncatula]
gi|355507095|gb|AES88237.1| hypothetical protein
MTR_4g051190 [Medicago truncatula]
Length = 96
Score = 73.6 bits (179), Expect(2) = 2e-16
Identities = 31/38 (81%), Positives = 33/38 (86%)
Frame = -2
Query: 123 YPTPRGSRIPAASLKERCPEPLDDGGTFARPPAYYAHS 10
YPTPRGSRIP ASLKERCP+PLDDGG ARPP YY H+
Sbjct: 59 YPTPRGSRIPVASLKERCPKPLDDGGILARPPFYYVHT 96
Score = 37.4 bits (85), Expect(2) = 2e-16
Identities = 21/33 (63%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -1
Query: 334 LFFSVSGISRE-QGGYIISWRISELLGRAGFEP 239
L+ S I RE Q GYII+W IS+ LGRAGFEP
Sbjct: 26 LYGSPLVIFREHQMGYIIAWWISKFLGRAGFEP 58
>ref|XP_003605618.1| Photosystem II reaction center protein M [Medicago truncatula]
gi|355506673|gb|AES87815.1| Photosystem II reaction
center protein M [Medicago truncatula]
Length = 164
Score = 55.1 bits (131), Expect(2) = 1e-13
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +2
Query: 29 GGRANVPPSSSGSGHLSFKEAAGIRLPLG 115
GGRA++PPSSSG GHLSFKEA GIRLPLG
Sbjct: 42 GGRASMPPSSSGLGHLSFKEATGIRLPLG 70
Score = 46.2 bits (108), Expect(2) = 1e-13
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +1
Query: 193 RLMGTDCKFVGNMSTLVQIQLGPII 267
RLMGTDCKFVGNMSTLVQIQL ++
Sbjct: 71 RLMGTDCKFVGNMSTLVQIQLVQLV 95
>ref|XP_002888366.1| hypothetical protein ARALYDRAFT_894017 [Arabidopsis lyrata subsp.
lyrata] gi|297334207|gb|EFH64625.1| hypothetical protein
ARALYDRAFT_894017 [Arabidopsis lyrata subsp. lyrata]
Length = 57
Score = 64.3 bits (155), Expect = 1e-08
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +3
Query: 24 MLAVGQMCPHRLVVQDISLSRRQRGFDFPWG 116
M+AV Q+CPHRLVVQDISLSRRQRGFDFPWG
Sbjct: 27 MMAVEQVCPHRLVVQDISLSRRQRGFDFPWG 57
>ref|XP_002886862.1| hypothetical protein ARALYDRAFT_893969 [Arabidopsis lyrata subsp.
lyrata] gi|297332703|gb|EFH63121.1| hypothetical protein
ARALYDRAFT_893969 [Arabidopsis lyrata subsp. lyrata]
Length = 63
Score = 64.3 bits (155), Expect = 1e-08
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +3
Query: 24 MLAVGQMCPHRLVVQDISLSRRQRGFDFPWG 116
M+AV Q+CPHRLVVQDISLSRRQRGFDFPWG
Sbjct: 33 MMAVEQVCPHRLVVQDISLSRRQRGFDFPWG 63
>ref|NP_683579.1| uncharacterized protein [Arabidopsis thaliana]
gi|332642848|gb|AEE76369.1| uncharacterized protein
AT3G20362 [Arabidopsis thaliana]
Length = 47
Score = 62.8 bits (151), Expect = 4e-08
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = +3
Query: 24 MLAVGQMCPHRLVVQDISLSRRQRGFDFPWG 116
M+AV Q+CPHRLVVQDISLSRRQ+GFDFPWG
Sbjct: 17 MMAVEQVCPHRLVVQDISLSRRQQGFDFPWG 47
>ref|NP_054927.1| hypothetical protein SpolCp017 [Spinacia oleracea]
gi|7636100|emb|CAB88720.1| hypothetical protein
[Spinacia oleracea]
Length = 83
Score = 61.6 bits (148), Expect = 1e-07
Identities = 34/46 (73%), Positives = 36/46 (78%)
Frame = +1
Query: 184 MPERLMGTDCKFVGNMSTLVQIQLGPIIH*SAMK*YNPLVLSKYLI 321
MPERLMGTDCKFVGNMSTLVQIQLGPII S ++ VL K LI
Sbjct: 1 MPERLMGTDCKFVGNMSTLVQIQLGPIISSSIIE-MKVFVLPKRLI 45
>gb|AFK48586.1| unknown [Medicago truncatula]
Length = 29
Score = 58.5 bits (140), Expect = 8e-07
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 184 MPERLMGTDCKFVGNMSTLVQIQLGPIIH 270
MPERLMGTDCKFVGNMSTLVQIQLGP I+
Sbjct: 1 MPERLMGTDCKFVGNMSTLVQIQLGPKIY 29