BLASTX nr result
ID: Jatropha_contig00017296
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00017296
(266 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota] 99 6e-19
gb|AAF66824.1|AF190656_1 poly(A)-binding protein [Nicotiana taba... 98 9e-19
gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana taba... 98 9e-19
ref|XP_002510185.1| polyadenylate-binding protein, putative [Ric... 97 2e-18
ref|XP_006342637.1| PREDICTED: polyadenylate-binding protein 8-l... 96 5e-18
gb|EOY14404.1| Poly(A) binding protein 8 isoform 2 [Theobroma ca... 96 5e-18
gb|EOY14403.1| Poly(A) binding protein 8 isoform 1 [Theobroma ca... 96 5e-18
ref|XP_004252758.1| PREDICTED: polyadenylate-binding protein 2-l... 96 5e-18
gb|AFP74112.1| poly-A binding protein, partial [Nicotiana bentha... 96 5e-18
gb|ERP52701.1| hypothetical protein POPTR_0014s02550g [Populus t... 96 6e-18
ref|XP_004230758.1| PREDICTED: polyadenylate-binding protein 2-l... 96 6e-18
ref|XP_002327166.1| predicted protein [Populus trichocarpa] 96 6e-18
emb|CAJ38367.1| polyA-binding protein [Plantago major] 95 1e-17
gb|ESR47968.1| hypothetical protein CICLE_v10000537mg [Citrus cl... 94 1e-17
gb|ESR47967.1| hypothetical protein CICLE_v10000537mg [Citrus cl... 94 1e-17
gb|ESR36215.1| hypothetical protein CICLE_v10027999mg [Citrus cl... 94 1e-17
ref|XP_003589160.1| Polyadenylate-binding protein [Medicago trun... 94 1e-17
gb|ESQ30503.1| hypothetical protein EUTSA_v10011289mg [Eutrema s... 94 2e-17
ref|XP_004304018.1| PREDICTED: polyadenylate-binding protein 2-l... 94 2e-17
ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana... 94 2e-17
>gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 99.0 bits (245), Expect = 6e-19
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSGISRGSGFVAFS PEEASRA LG+MNGKM
Sbjct: 350 SCKVMRDPSGISRGSGFVAFSTPEEASRA-----------------------LGEMNGKM 386
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
+VSKPLYVALAQRKEER+ARLQAQF
Sbjct: 387 IVSKPLYVALAQRKEERRARLQAQF 411
>gb|AAF66824.1|AF190656_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 330
Score = 98.2 bits (243), Expect = 9e-19
Identities = 54/85 (63%), Positives = 61/85 (71%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSG+S+GSGFVAFSNPEEASRA+S +MNGKM
Sbjct: 18 SCKVMRDPSGVSKGSGFVAFSNPEEASRALS-----------------------EMNGKM 54
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
VVSKPLYVALAQRKEER+ARLQAQF
Sbjct: 55 VVSKPLYVALAQRKEERRARLQAQF 79
>gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 98.2 bits (243), Expect = 9e-19
Identities = 54/85 (63%), Positives = 61/85 (71%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSG+S+GSGFVAFSNPEEASRA+S +MNGKM
Sbjct: 337 SCKVMRDPSGVSKGSGFVAFSNPEEASRALS-----------------------EMNGKM 373
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
VVSKPLYVALAQRKEER+ARLQAQF
Sbjct: 374 VVSKPLYVALAQRKEERRARLQAQF 398
>ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding
protein, putative [Ricinus communis]
Length = 658
Score = 97.1 bits (240), Expect = 2e-18
Identities = 55/85 (64%), Positives = 59/85 (69%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSGISRGSGFVAFS PEEASRA L +MNGKM
Sbjct: 346 SCKVMRDPSGISRGSGFVAFSTPEEASRA-----------------------LAEMNGKM 382
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
VVSKPLYVALAQRKEER+ARLQAQF
Sbjct: 383 VVSKPLYVALAQRKEERRARLQAQF 407
>ref|XP_006342637.1| PREDICTED: polyadenylate-binding protein 8-like [Solanum tuberosum]
Length = 665
Score = 95.9 bits (237), Expect = 5e-18
Identities = 53/85 (62%), Positives = 60/85 (70%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSGISRGSGFVAFS PEEASRA+S +MNGKM
Sbjct: 355 SCKVMRDPSGISRGSGFVAFSTPEEASRALS-----------------------EMNGKM 391
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
+VSKPLYVALAQRKEER+A+LQAQF
Sbjct: 392 IVSKPLYVALAQRKEERRAKLQAQF 416
>gb|EOY14404.1| Poly(A) binding protein 8 isoform 2 [Theobroma cacao]
Length = 446
Score = 95.9 bits (237), Expect = 5e-18
Identities = 54/85 (63%), Positives = 59/85 (69%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSGIS+GSGFVAFS PEEASRA L +MNGKM
Sbjct: 268 SCKVMRDPSGISKGSGFVAFSTPEEASRA-----------------------LAEMNGKM 304
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
VVSKPLYVALAQRKEER+ARLQAQF
Sbjct: 305 VVSKPLYVALAQRKEERRARLQAQF 329
>gb|EOY14403.1| Poly(A) binding protein 8 isoform 1 [Theobroma cacao]
Length = 648
Score = 95.9 bits (237), Expect = 5e-18
Identities = 54/85 (63%), Positives = 59/85 (69%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSGIS+GSGFVAFS PEEASRA L +MNGKM
Sbjct: 340 SCKVMRDPSGISKGSGFVAFSTPEEASRA-----------------------LAEMNGKM 376
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
VVSKPLYVALAQRKEER+ARLQAQF
Sbjct: 377 VVSKPLYVALAQRKEERRARLQAQF 401
>ref|XP_004252758.1| PREDICTED: polyadenylate-binding protein 2-like [Solanum
lycopersicum]
Length = 666
Score = 95.9 bits (237), Expect = 5e-18
Identities = 53/85 (62%), Positives = 60/85 (70%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSGISRGSGFVAFS PEEASRA+S +MNGKM
Sbjct: 355 SCKVMRDPSGISRGSGFVAFSTPEEASRALS-----------------------EMNGKM 391
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
+VSKPLYVALAQRKEER+A+LQAQF
Sbjct: 392 IVSKPLYVALAQRKEERRAKLQAQF 416
>gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 95.9 bits (237), Expect = 5e-18
Identities = 53/85 (62%), Positives = 60/85 (70%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSG+S+GSGFVAFS PEEASRA+S +MNGKM
Sbjct: 337 SCKVMRDPSGVSKGSGFVAFSTPEEASRALS-----------------------EMNGKM 373
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
VVSKPLYVALAQRKEER+ARLQAQF
Sbjct: 374 VVSKPLYVALAQRKEERRARLQAQF 398
>gb|ERP52701.1| hypothetical protein POPTR_0014s02550g [Populus trichocarpa]
Length = 651
Score = 95.5 bits (236), Expect = 6e-18
Identities = 53/85 (62%), Positives = 59/85 (69%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSGISRGSGFVAFS PEEASRA L +MNGKM
Sbjct: 341 SCKVMRDPSGISRGSGFVAFSTPEEASRA-----------------------LAEMNGKM 377
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
++SKPLYVALAQRKEER+ARLQAQF
Sbjct: 378 LISKPLYVALAQRKEERRARLQAQF 402
>ref|XP_004230758.1| PREDICTED: polyadenylate-binding protein 2-like [Solanum
lycopersicum]
Length = 643
Score = 95.5 bits (236), Expect = 6e-18
Identities = 52/85 (61%), Positives = 60/85 (70%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSG+S+GSGFVAFS+PEEASRA L +MNGKM
Sbjct: 331 SCKVMRDPSGVSKGSGFVAFSSPEEASRA-----------------------LAEMNGKM 367
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
+VSKPLYVALAQRKEER+ARLQAQF
Sbjct: 368 IVSKPLYVALAQRKEERRARLQAQF 392
>ref|XP_002327166.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 95.5 bits (236), Expect = 6e-18
Identities = 53/85 (62%), Positives = 59/85 (69%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSGISRGSGFVAFS PEEASRA L +MNGKM
Sbjct: 322 SCKVMRDPSGISRGSGFVAFSTPEEASRA-----------------------LAEMNGKM 358
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
++SKPLYVALAQRKEER+ARLQAQF
Sbjct: 359 LISKPLYVALAQRKEERRARLQAQF 383
>emb|CAJ38367.1| polyA-binding protein [Plantago major]
Length = 314
Score = 94.7 bits (234), Expect = 1e-17
Identities = 52/85 (61%), Positives = 60/85 (70%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSGISRGSGFVAFS PEE++RA+S +MNGKM
Sbjct: 4 SCKVMRDPSGISRGSGFVAFSTPEESARALS-----------------------EMNGKM 40
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
V+SKPLYVALAQRKEER+ARLQAQF
Sbjct: 41 VISKPLYVALAQRKEERRARLQAQF 65
>gb|ESR47968.1| hypothetical protein CICLE_v10000537mg [Citrus clementina]
Length = 519
Score = 94.4 bits (233), Expect = 1e-17
Identities = 52/85 (61%), Positives = 59/85 (69%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSGIS+GSGFVAFS PEEASRA L +MNGKM
Sbjct: 340 SCKVMRDPSGISKGSGFVAFSTPEEASRA-----------------------LAEMNGKM 376
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
+VSKPLYVA+AQRKEER+ARLQAQF
Sbjct: 377 IVSKPLYVAVAQRKEERRARLQAQF 401
>gb|ESR47967.1| hypothetical protein CICLE_v10000537mg [Citrus clementina]
Length = 651
Score = 94.4 bits (233), Expect = 1e-17
Identities = 52/85 (61%), Positives = 59/85 (69%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSGIS+GSGFVAFS PEEASRA L +MNGKM
Sbjct: 340 SCKVMRDPSGISKGSGFVAFSTPEEASRA-----------------------LAEMNGKM 376
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
+VSKPLYVA+AQRKEER+ARLQAQF
Sbjct: 377 IVSKPLYVAVAQRKEERRARLQAQF 401
>gb|ESR36215.1| hypothetical protein CICLE_v10027999mg [Citrus clementina]
Length = 645
Score = 94.4 bits (233), Expect = 1e-17
Identities = 54/85 (63%), Positives = 59/85 (69%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSGISRGSGFVAFS PEEASRA L +MNGKM
Sbjct: 334 SCKVMRDPSGISRGSGFVAFSTPEEASRA-----------------------LLEMNGKM 370
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
VVSKPLYVALAQRKE+R+ARLQAQF
Sbjct: 371 VVSKPLYVALAQRKEDRRARLQAQF 395
>ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding
protein [Medicago truncatula]
Length = 647
Score = 94.4 bits (233), Expect = 1e-17
Identities = 50/83 (60%), Positives = 59/83 (71%)
Frame = +2
Query: 17 QVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKMVV 196
++MRDP+G+SRGSGFVAFS PEEASRA LG+MNGKM+V
Sbjct: 345 KIMRDPNGVSRGSGFVAFSTPEEASRA-----------------------LGEMNGKMIV 381
Query: 197 SKPLYVALAQRKEERKARLQAQF 265
SKPLYVA+AQRKE+R+ARLQAQF
Sbjct: 382 SKPLYVAVAQRKEDRRARLQAQF 404
>gb|ESQ30503.1| hypothetical protein EUTSA_v10011289mg [Eutrema salsugineum]
Length = 669
Score = 94.0 bits (232), Expect = 2e-17
Identities = 50/85 (58%), Positives = 60/85 (70%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSG+SRGSGFVAFS PEEA+RA++ +MNGKM
Sbjct: 347 SCKVMRDPSGVSRGSGFVAFSTPEEATRAIA-----------------------EMNGKM 383
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
+V+KPLYVALAQRKE+RKARLQAQF
Sbjct: 384 IVTKPLYVALAQRKEDRKARLQAQF 408
>ref|XP_004304018.1| PREDICTED: polyadenylate-binding protein 2-like [Fragaria vesca
subsp. vesca]
Length = 651
Score = 94.0 bits (232), Expect = 2e-17
Identities = 51/85 (60%), Positives = 59/85 (69%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSG+SRGSGFVAFS PEEA+RA L +MNGKM
Sbjct: 340 SCKVMRDPSGVSRGSGFVAFSTPEEANRA-----------------------LAEMNGKM 376
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
+VSKPLYVALAQRKE+R+ARLQAQF
Sbjct: 377 IVSKPLYVALAQRKEDRRARLQAQF 401
>ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein
8 [Arabidopsis thaliana]
gi|75334461|sp|Q9FXA2.1|PABP8_ARATH RecName:
Full=Polyadenylate-binding protein 8; Short=PABP-8;
Short=Poly(A)-binding protein 8
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A
Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A
Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding
Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8
[Arabidopsis thaliana] gi|332194352|gb|AEE32473.1|
poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 94.0 bits (232), Expect = 2e-17
Identities = 50/85 (58%), Positives = 60/85 (70%)
Frame = +2
Query: 11 NAQVMRDPSGISRGSGFVAFSNPEEASRAVSPDRFCCHM*SEIDLSLFVSLQLGKMNGKM 190
+ +VMRDPSG+SRGSGFVAFS PEEA+RA++ +MNGKM
Sbjct: 355 SCKVMRDPSGVSRGSGFVAFSTPEEATRAIT-----------------------EMNGKM 391
Query: 191 VVSKPLYVALAQRKEERKARLQAQF 265
+V+KPLYVALAQRKE+RKARLQAQF
Sbjct: 392 IVTKPLYVALAQRKEDRKARLQAQF 416