BLASTX nr result
ID: Jatropha_contig00017210
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00017210
(507 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002533802.1| cellular nucleic acid binding protein, putat... 150 2e-34
ref|XP_002327749.1| predicted protein [Populus trichocarpa] gi|5... 129 4e-28
gb|ERP58391.1| cold-shock DNA-binding family protein [Populus tr... 127 2e-27
ref|XP_002304323.1| predicted protein [Populus trichocarpa] 125 4e-27
gb|EPS59299.1| hypothetical protein M569_15509, partial [Genlise... 103 2e-20
gb|AGV15831.1| cold shock domain protein 1 [Camelina sativa] 101 1e-19
ref|XP_006299191.1| hypothetical protein CARUB_v10015336mg [Caps... 100 2e-19
gb|ADE80750.1| cold shock domain protein 3 [Eutrema salsugineum]... 100 3e-19
gb|EEE87678.2| hypothetical protein POPTR_0009s13460g [Populus t... 98 1e-18
ref|NP_565427.1| cold shock domain protein 3 [Arabidopsis thalia... 97 2e-18
gb|ESR38691.1| hypothetical protein CICLE_v10027474mg [Citrus cl... 97 3e-18
ref|XP_006284948.1| hypothetical protein CARUB_v10006250mg [Caps... 97 3e-18
ref|XP_004232496.1| PREDICTED: DNA-binding protein HEXBP-like [S... 97 3e-18
gb|EPS64559.1| hypothetical protein M569_10222, partial [Genlise... 96 4e-18
ref|XP_002305502.1| predicted protein [Populus trichocarpa] gi|2... 96 5e-18
ref|XP_006340741.1| PREDICTED: cold shock domain-containing prot... 96 6e-18
gb|ESQ53484.1| hypothetical protein EUTSA_v10026001mg [Eutrema s... 93 3e-17
ref|XP_002886133.1| hypothetical protein ARALYDRAFT_480687 [Arab... 93 4e-17
ref|NP_195326.1| cold shock protein 1 [Arabidopsis thaliana] gi|... 92 5e-17
gb|EOX90843.1| Cold shock domain protein 1, putative [Theobroma ... 92 7e-17
>ref|XP_002533802.1| cellular nucleic acid binding protein, putative [Ricinus communis]
gi|223526275|gb|EEF28589.1| cellular nucleic acid
binding protein, putative [Ricinus communis]
Length = 266
Score = 150 bits (379), Expect = 2e-34
Identities = 76/91 (83%), Positives = 84/91 (92%), Gaps = 1/91 (1%)
Frame = +1
Query: 181 MAQSMAAEEKTAVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDE 360
MAQSMA EE+T VRS GKVVRFSDRKGFGFIKPDDGG+DLFVHH+AIKSDG YRSL ED+
Sbjct: 1 MAQSMA-EEQTGVRSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDD 59
Query: 361 TVEFTVALSDD-KYQAINVTAPGGGPIQANN 450
VEFTV+LSDD KYQA++VTAPGGGPIQAN+
Sbjct: 60 VVEFTVSLSDDNKYQAVDVTAPGGGPIQANH 90
>ref|XP_002327749.1| predicted protein [Populus trichocarpa] gi|550338672|gb|ERP60892.1|
cold-shock DNA-binding family protein [Populus
trichocarpa]
Length = 235
Score = 129 bits (324), Expect = 4e-28
Identities = 62/85 (72%), Positives = 73/85 (85%), Gaps = 4/85 (4%)
Frame = +1
Query: 199 AEEKTAV----RSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETV 366
AEE+ A RSTG+VVRFSD+KGFGFIKPD G DLFVHH+AIKSDGGYR+L ED+ V
Sbjct: 2 AEEQVAATKEERSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDVV 61
Query: 367 EFTVALSDDKYQAINVTAPGGGPIQ 441
EFT+ L+DDKYQA++VTAPGGGPI+
Sbjct: 62 EFTILLNDDKYQAVDVTAPGGGPIK 86
>gb|ERP58391.1| cold-shock DNA-binding family protein [Populus trichocarpa]
Length = 243
Score = 127 bits (318), Expect = 2e-27
Identities = 63/93 (67%), Positives = 74/93 (79%), Gaps = 6/93 (6%)
Frame = +1
Query: 181 MAQSMAAEEKTAV------RSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYR 342
MA+ AA+ V RSTG+VVRFSD+KGFGFIKPD G DLFVHH+AIKSDGGYR
Sbjct: 1 MAEEQAADVAADVAATKEERSTGRVVRFSDKKGFGFIKPDVGDKDLFVHHSAIKSDGGYR 60
Query: 343 SLTEDETVEFTVALSDDKYQAINVTAPGGGPIQ 441
+L ED+ VEFT+ L++DKYQAI VTAPGGGPI+
Sbjct: 61 TLYEDDVVEFTILLTEDKYQAIEVTAPGGGPIK 93
>ref|XP_002304323.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 125 bits (315), Expect = 4e-27
Identities = 58/74 (78%), Positives = 67/74 (90%)
Frame = +1
Query: 220 RSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEFTVALSDDKY 399
RSTG+VVRFSD+KGFGFIKPD G DLFVHH+AIKSDGGYR+L ED+ VEFT+ L++DKY
Sbjct: 2 RSTGRVVRFSDKKGFGFIKPDVGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLTEDKY 61
Query: 400 QAINVTAPGGGPIQ 441
QAI VTAPGGGPI+
Sbjct: 62 QAIEVTAPGGGPIK 75
>gb|EPS59299.1| hypothetical protein M569_15509, partial [Genlisea aurea]
Length = 200
Score = 103 bits (257), Expect = 2e-20
Identities = 49/78 (62%), Positives = 61/78 (78%)
Frame = +1
Query: 205 EKTAVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEFTVAL 384
E+ RS G V +F+D+KG+GFI+PD+GGDDLFVH TAIKSD GYR+L E + VEFT+ L
Sbjct: 1 EEKLTRSKGVVTKFNDQKGYGFIQPDEGGDDLFVHQTAIKSD-GYRTLREGQEVEFTIIL 59
Query: 385 SDDKYQAINVTAPGGGPI 438
DK +A VTAPGGGP+
Sbjct: 60 DGDKTKATEVTAPGGGPV 77
>gb|AGV15831.1| cold shock domain protein 1 [Camelina sativa]
Length = 258
Score = 101 bits (251), Expect = 1e-19
Identities = 52/87 (59%), Positives = 69/87 (79%), Gaps = 1/87 (1%)
Frame = +1
Query: 193 MAAEEKTAVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEF 372
MA+E+++ VRSTGKV FSD KG+GF+ PDDG +LFVH ++I SD G+RSLT ++VEF
Sbjct: 1 MASEDQSVVRSTGKVSWFSDIKGYGFVTPDDGSVELFVHQSSIASD-GFRSLTVGDSVEF 59
Query: 373 TVAL-SDDKYQAINVTAPGGGPIQANN 450
TVA SD K +A++VTAPGGGP++ N
Sbjct: 60 TVAEGSDGKTKAVDVTAPGGGPLKKEN 86
>ref|XP_006299191.1| hypothetical protein CARUB_v10015336mg [Capsella rubella]
gi|482567900|gb|EOA32089.1| hypothetical protein
CARUB_v10015336mg [Capsella rubella]
Length = 310
Score = 100 bits (248), Expect = 2e-19
Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
Frame = +1
Query: 193 MAAEEKTAVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEF 372
MA E+++A RSTGKV FSD KG+GFI PDDGGD+LFVH ++I SD G+RSLT E+VE+
Sbjct: 1 MAMEDQSAARSTGKVNWFSDGKGYGFITPDDGGDELFVHQSSIVSD-GFRSLTVGESVEY 59
Query: 373 TVAL-SDDKYQAINVTAPGGGPI 438
+ L SD K +AI+VTAPGGG +
Sbjct: 60 AITLGSDGKTKAIDVTAPGGGSL 82
>gb|ADE80750.1| cold shock domain protein 3 [Eutrema salsugineum]
gi|557110387|gb|ESQ50678.1| hypothetical protein
EUTSA_v10022795mg [Eutrema salsugineum]
Length = 295
Score = 99.8 bits (247), Expect = 3e-19
Identities = 51/84 (60%), Positives = 66/84 (78%), Gaps = 1/84 (1%)
Frame = +1
Query: 193 MAAEEKTAVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEF 372
MA E+++A RSTGKV FSD KG+GFI PDDGGD+LFVH ++I SD G+RSLT E+VE+
Sbjct: 1 MAQEDQSAARSTGKVNWFSDGKGYGFITPDDGGDELFVHQSSIVSD-GFRSLTVGESVEY 59
Query: 373 TVAL-SDDKYQAINVTAPGGGPIQ 441
+ L SD K +A+ VTAPGGG ++
Sbjct: 60 AITLGSDGKTKAVEVTAPGGGSLK 83
>gb|EEE87678.2| hypothetical protein POPTR_0009s13460g [Populus trichocarpa]
Length = 168
Score = 97.8 bits (242), Expect = 1e-18
Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = +1
Query: 220 RSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEFTVALSDD-K 396
R TGKV FSD+KGFGFI PDDGGDDLFVH ++IKS+ GYRSL + E VEF + SDD +
Sbjct: 5 RQTGKVKWFSDQKGFGFITPDDGGDDLFVHQSSIKSE-GYRSLGDGEEVEFEIENSDDGR 63
Query: 397 YQAINVTAPGGGPIQ 441
+A NVTAPGG P+Q
Sbjct: 64 TKAANVTAPGGNPVQ 78
>ref|NP_565427.1| cold shock domain protein 3 [Arabidopsis thaliana]
gi|75165198|sp|Q94C69.1|CSP3_ARATH RecName: Full=Cold
shock domain-containing protein 3; Short=AtCSP3
gi|14334920|gb|AAK59638.1| putative glycine-rich,
zinc-finger DNA-binding protein [Arabidopsis thaliana]
gi|17104541|gb|AAL34159.1| putative glycine-rich,
zinc-finger DNA-binding protein [Arabidopsis thaliana]
gi|148726892|dbj|BAF63841.1| cold shock domain protein 3
[Arabidopsis thaliana] gi|330251603|gb|AEC06697.1| cold
shock domain protein 3 [Arabidopsis thaliana]
Length = 301
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/83 (61%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +1
Query: 193 MAAEEKTAVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEF 372
MA E+++A RS GKV FSD KG+GFI PDDGG++LFVH ++I SD G+RSLT E+VE+
Sbjct: 1 MAMEDQSAARSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSD-GFRSLTLGESVEY 59
Query: 373 TVAL-SDDKYQAINVTAPGGGPI 438
+AL SD K +AI VTAPGGG +
Sbjct: 60 EIALGSDGKTKAIEVTAPGGGSL 82
>gb|ESR38691.1| hypothetical protein CICLE_v10027474mg [Citrus clementina]
Length = 264
Score = 96.7 bits (239), Expect = 3e-18
Identities = 48/77 (62%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = +1
Query: 220 RSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEFTVAL-SDDK 396
RSTGKV F KG+GFI+PDDGG DLFVH +IKSD GYR+L E+++VEF V L +D K
Sbjct: 6 RSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSD-GYRTLYENQSVEFDVQLEADGK 64
Query: 397 YQAINVTAPGGGPIQAN 447
YQA++VTAPGG P+ ++
Sbjct: 65 YQALDVTAPGGAPVHSS 81
>ref|XP_006284948.1| hypothetical protein CARUB_v10006250mg [Capsella rubella]
gi|482553653|gb|EOA17846.1| hypothetical protein
CARUB_v10006250mg [Capsella rubella]
Length = 262
Score = 96.7 bits (239), Expect = 3e-18
Identities = 51/87 (58%), Positives = 67/87 (77%), Gaps = 1/87 (1%)
Frame = +1
Query: 193 MAAEEKTAVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEF 372
MA+E +A RSTGKV F+D KG+GFI PD+GGD+LFVH +AI S+ GYRSL D+ VEF
Sbjct: 1 MASE--SAARSTGKVNWFNDTKGYGFIAPDEGGDELFVHQSAIVSE-GYRSLAVDDLVEF 57
Query: 373 TVAL-SDDKYQAINVTAPGGGPIQANN 450
++ SD K +A++VTAPGGGP++ N
Sbjct: 58 SITQGSDGKTKAVDVTAPGGGPLKKEN 84
>ref|XP_004232496.1| PREDICTED: DNA-binding protein HEXBP-like [Solanum lycopersicum]
Length = 260
Score = 96.7 bits (239), Expect = 3e-18
Identities = 47/77 (61%), Positives = 58/77 (75%)
Frame = +1
Query: 214 AVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEFTVALSDD 393
A R TG V +FS+ KG+GFIKPDDG +DLFVH + IKSD GYRSL E + VEFT+ + D
Sbjct: 5 ASRMTGTVSKFSNPKGYGFIKPDDGSEDLFVHQSEIKSD-GYRSLYEGQKVEFTMTVKGD 63
Query: 394 KYQAINVTAPGGGPIQA 444
KYQAI+VT P G P+ +
Sbjct: 64 KYQAIDVTGPDGAPLDS 80
>gb|EPS64559.1| hypothetical protein M569_10222, partial [Genlisea aurea]
Length = 184
Score = 96.3 bits (238), Expect = 4e-18
Identities = 46/73 (63%), Positives = 58/73 (79%)
Frame = +1
Query: 220 RSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEFTVALSDDKY 399
RS G V RF+D+KG+GFI+PD+GGD+LFVH TAIKSD G+R L E + VEFTV L +K
Sbjct: 3 RSKGVVTRFNDQKGYGFIQPDEGGDELFVHQTAIKSD-GFRKLREGQEVEFTVVLDGEKT 61
Query: 400 QAINVTAPGGGPI 438
+A +VTAPGGG +
Sbjct: 62 KATDVTAPGGGSV 74
>ref|XP_002305502.1| predicted protein [Populus trichocarpa] gi|222848466|gb|EEE86013.1|
cold-shock DNA-binding family protein [Populus
trichocarpa]
Length = 207
Score = 95.9 bits (237), Expect = 5e-18
Identities = 48/75 (64%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Frame = +1
Query: 220 RSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEFTVALSDD-K 396
R TGKV FSD+KGFGFI PDDG DDLFVH ++IKS+ GYRSL + E VEF + SDD +
Sbjct: 4 RQTGKVKWFSDQKGFGFISPDDGSDDLFVHQSSIKSE-GYRSLGDGEEVEFVIENSDDGR 62
Query: 397 YQAINVTAPGGGPIQ 441
+A++VTAPGG P+Q
Sbjct: 63 TKAVDVTAPGGNPVQ 77
>ref|XP_006340741.1| PREDICTED: cold shock domain-containing protein 3-like [Solanum
tuberosum]
Length = 261
Score = 95.5 bits (236), Expect = 6e-18
Identities = 46/77 (59%), Positives = 58/77 (75%)
Frame = +1
Query: 214 AVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEFTVALSDD 393
A R TG V +F++ KG+GFIKPDDG +DLFVH + IKSD GYRSL E + VEFT+ + D
Sbjct: 5 ASRMTGTVSKFNNPKGYGFIKPDDGSEDLFVHQSEIKSD-GYRSLYEGQKVEFTMTVKGD 63
Query: 394 KYQAINVTAPGGGPIQA 444
KYQAI+VT P G P+ +
Sbjct: 64 KYQAIDVTGPDGAPLDS 80
>gb|ESQ53484.1| hypothetical protein EUTSA_v10026001mg [Eutrema salsugineum]
Length = 263
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/83 (57%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Frame = +1
Query: 193 MAAEEKTAVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEF 372
MA E++ AVRSTGKV F+D KG+GFI PDD G++LFVH ++I S+ G+RSLT ++VEF
Sbjct: 1 MALEDQFAVRSTGKVNWFNDSKGYGFITPDDDGEELFVHQSSILSE-GFRSLTVGDSVEF 59
Query: 373 TVAL-SDDKYQAINVTAPGGGPI 438
V +D K +A+NVTAPGG P+
Sbjct: 60 AVTQGTDGKTKAVNVTAPGGAPL 82
>ref|XP_002886133.1| hypothetical protein ARALYDRAFT_480687 [Arabidopsis lyrata subsp.
lyrata] gi|297331973|gb|EFH62392.1| hypothetical protein
ARALYDRAFT_480687 [Arabidopsis lyrata subsp. lyrata]
Length = 299
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/80 (58%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = +1
Query: 202 EEKTAVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEFTVA 381
E+++A R GKV F D KG+GFI PDDGG++LFVH ++I SD GYRSLT E+VE+++
Sbjct: 2 EDQSAARYIGKVNWFGDGKGYGFITPDDGGEELFVHQSSIVSD-GYRSLTVGESVEYSIT 60
Query: 382 L-SDDKYQAINVTAPGGGPI 438
L SD K +A+NVTAPGGG +
Sbjct: 61 LGSDGKTKAVNVTAPGGGSL 80
>ref|NP_195326.1| cold shock protein 1 [Arabidopsis thaliana]
gi|75318587|sp|O65639.1|CSP1_ARATH RecName: Full=Cold
shock protein 1; Short=AtCSP1; AltName: Full=Cold shock
domain-containing protein 1 gi|3036806|emb|CAA18496.1|
glycine-rich protein [Arabidopsis thaliana]
gi|7270554|emb|CAB81511.1| glycine-rich protein
[Arabidopsis thaliana] gi|110741941|dbj|BAE98911.1|
glycine-rich protein [Arabidopsis thaliana]
gi|332661203|gb|AEE86603.1| cold shock protein 1
[Arabidopsis thaliana]
Length = 299
Score = 92.4 bits (228), Expect = 5e-17
Identities = 48/87 (55%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +1
Query: 193 MAAEEKTAVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEF 372
MA+E+++A RSTGKV F+ KG+GFI PDDG +LFVH ++I S+ GYRSLT + VEF
Sbjct: 1 MASEDQSAARSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSE-GYRSLTVGDAVEF 59
Query: 373 TVAL-SDDKYQAINVTAPGGGPIQANN 450
+ SD K +A+NVTAPGGG ++ N
Sbjct: 60 AITQGSDGKTKAVNVTAPGGGSLKKEN 86
>gb|EOX90843.1| Cold shock domain protein 1, putative [Theobroma cacao]
Length = 249
Score = 92.0 bits (227), Expect = 7e-17
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = +1
Query: 202 EEKTAVRSTGKVVRFSDRKGFGFIKPDDGGDDLFVHHTAIKSDGGYRSLTEDETVEFTVA 381
+E+ RS GKV+ F+D+KGFGFI+PDD +DLFVH ++IKSD GYRSL E E+VEFTV+
Sbjct: 6 QEQQQSRSAGKVLWFNDQKGFGFIRPDDESEDLFVHQSSIKSD-GYRSLAEGESVEFTVS 64
Query: 382 LSD-DKYQAINVTAPGGGPI 438
+ K QA++VTA GG PI
Sbjct: 65 QGNGGKTQAVDVTAIGGSPI 84