BLASTX nr result

ID: Jatropha_contig00017155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00017155
         (280 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521783.1| dead box ATP-dependent RNA helicase, putativ...    58   1e-06
gb|EEF06238.2| DEAD box RNA helicase family protein [Populus tri...    57   2e-06
ref|XP_002322111.1| predicted protein [Populus trichocarpa]            57   2e-06

>ref|XP_002521783.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538996|gb|EEF40593.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 714

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/51 (64%), Positives = 38/51 (74%)
 Frame = +1

Query: 70  MKRSIDDIGANSNNKNGSKQVILTKAQREQLTLERRLEKIKEQKLNQQQLL 222
           MKRSI+D  A SN+K   K V LTK QREQL LERR E+ ++QKL QQQLL
Sbjct: 1   MKRSIEDPIATSNSK---KPVFLTKEQREQLALERRQEEFQQQKLRQQQLL 48


>gb|EEF06238.2| DEAD box RNA helicase family protein [Populus trichocarpa]
          Length = 710

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = +1

Query: 70  MKRSIDDIGANSNNKNGSKQVILTKAQREQLTLERRLEKIKEQKLNQQQLL 222
           MKRS DDIG +   K  SK V LTKAQREQL L+RR E+I++QK  QQ LL
Sbjct: 1   MKRSFDDIGVS---KTQSKPVFLTKAQREQLALQRRQEEIEQQKKRQQLLL 48


>ref|XP_002322111.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = +1

Query: 70  MKRSIDDIGANSNNKNGSKQVILTKAQREQLTLERRLEKIKEQKLNQQQLL 222
           MKRS DDIG +   K  SK V LTKAQREQL L+RR E+I++QK  QQ LL
Sbjct: 1   MKRSFDDIGVS---KTQSKPVFLTKAQREQLALQRRQEEIEQQKKRQQLLL 48


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