BLASTX nr result

ID: Jatropha_contig00016794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00016794
         (740 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ESR47496.1| hypothetical protein CICLE_v10001485mg [Citrus cl...   414   e-113
gb|ESR47495.1| hypothetical protein CICLE_v10001485mg [Citrus cl...   414   e-113
ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-li...   414   e-113
ref|XP_002520330.1| replication factor C / DNA polymerase III ga...   414   e-113
ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 is...   412   e-113
emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]   412   e-113
ref|XP_003602047.1| Replication factor C subunit [Medicago trunc...   409   e-112
gb|AFK40832.1| unknown [Lotus japonicus]                              408   e-111
ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-li...   404   e-110
ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|2...   404   e-110
gb|EOY16376.1| ATPase family associated with various cellular ac...   403   e-110
ref|NP_001185061.1| protein embryo defective 1968 [Arabidopsis t...   402   e-110
ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [S...   402   e-110
ref|NP_564148.1| protein embryo defective 1968 [Arabidopsis thal...   402   e-110
gb|EMT17871.1| Replication factor C subunit 4 [Aegilops tauschii]     402   e-110
ref|XP_002441912.1| hypothetical protein SORBIDRAFT_08g004780 [S...   402   e-110
ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-li...   402   e-110
ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-li...   402   e-110
gb|ESQ34629.1| hypothetical protein EUTSA_v10008129mg [Eutrema s...   401   e-109
ref|XP_003526646.1| PREDICTED: replication factor C subunit 4-li...   400   e-109

>gb|ESR47496.1| hypothetical protein CICLE_v10001485mg [Citrus clementina]
          Length = 382

 Score =  414 bits (1065), Expect = e-113
 Identities = 209/246 (84%), Positives = 223/246 (90%)
 Frame = +3

Query: 3   ERRRAMAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGK 182
           E +R MAPVL +SQPWVEKYRPKQVKDVAHQEEVVRVLTNT+ET +CPHMLFYGPPGTGK
Sbjct: 36  EVKRKMAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGK 95

Query: 183 TTSALAIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCP 362
           TT+ALAIA QLFGPELYKSRV+ELNASDDRGINVVRTKIK F              YPCP
Sbjct: 96  TTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGG-YPCP 154

Query: 363 PYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPL 542
           PYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPL
Sbjct: 155 PYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL 214

Query: 543 SEDIMSDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLI 722
           SE++MS R+L+IC EEGLN+DAEALSTLSSIS GDLRRAITYLQGAARLFGS+I+SKDLI
Sbjct: 215 SEEVMSSRVLHICNEEGLNLDAEALSTLSSISHGDLRRAITYLQGAARLFGSSITSKDLI 274

Query: 723 SVSGVI 740
           SVSGVI
Sbjct: 275 SVSGVI 280


>gb|ESR47495.1| hypothetical protein CICLE_v10001485mg [Citrus clementina]
          Length = 337

 Score =  414 bits (1065), Expect = e-113
 Identities = 209/246 (84%), Positives = 223/246 (90%)
 Frame = +3

Query: 3   ERRRAMAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGK 182
           E +R MAPVL +SQPWVEKYRPKQVKDVAHQEEVVRVLTNT+ET +CPHMLFYGPPGTGK
Sbjct: 36  EVKRKMAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGK 95

Query: 183 TTSALAIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCP 362
           TT+ALAIA QLFGPELYKSRV+ELNASDDRGINVVRTKIK F              YPCP
Sbjct: 96  TTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKTFAAVAVGSGQRRGG-YPCP 154

Query: 363 PYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPL 542
           PYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPL
Sbjct: 155 PYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL 214

Query: 543 SEDIMSDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLI 722
           SE++MS R+L+IC EEGLN+DAEALSTLSSIS GDLRRAITYLQGAARLFGS+I+SKDLI
Sbjct: 215 SEEVMSSRVLHICNEEGLNLDAEALSTLSSISHGDLRRAITYLQGAARLFGSSITSKDLI 274

Query: 723 SVSGVI 740
           SVSGVI
Sbjct: 275 SVSGVI 280


>ref|XP_004502518.1| PREDICTED: replication factor C subunit 4-like [Cicer arietinum]
          Length = 341

 Score =  414 bits (1065), Expect = e-113
 Identities = 206/241 (85%), Positives = 220/241 (91%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAP++P+SQPWVEKYRPKQVKDVAHQEEV+RVLTNT+ETG CPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPIIPSSQPWVEKYRPKQVKDVAHQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QLFGPELYKSRV+ELNASDDRGINVVRTKIKDF              YPCPPYKII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKNG-YPCPPYKII 119

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           +LDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPL+E+IM
Sbjct: 120 VLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIM 179

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           S RILYICKEEGL +DAE LS LSSISQGDLRRAITYLQ AARLFGS+ISSKDLISVSGV
Sbjct: 180 SSRILYICKEEGLYLDAEGLSALSSISQGDLRRAITYLQSAARLFGSSISSKDLISVSGV 239

Query: 738 I 740
           +
Sbjct: 240 V 240


>ref|XP_002520330.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223540549|gb|EEF42116.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 342

 Score =  414 bits (1065), Expect = e-113
 Identities = 208/241 (86%), Positives = 222/241 (92%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAP+L +SQPWVEKYRPKQVKDVAHQEEVVRVLTNT+ET +CPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPILQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QLFGPELYKSRV+ELNASDDRGINVVRTKIK+F              YPCPPYKII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGQRAGG-YPCPPYKII 119

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSE+IM
Sbjct: 120 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEEIM 179

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           S R+L+IC+EEGLN+DAEALSTLS +SQGDLRRAITYLQGAARL+GSTISSKDLISVSGV
Sbjct: 180 SSRVLHICREEGLNLDAEALSTLSYVSQGDLRRAITYLQGAARLYGSTISSKDLISVSGV 239

Query: 738 I 740
           I
Sbjct: 240 I 240


>ref|XP_002285874.1| PREDICTED: replication factor C subunit 4 isoform 1 [Vitis
           vinifera] gi|302141781|emb|CBI18984.3| unnamed protein
           product [Vitis vinifera]
          Length = 341

 Score =  412 bits (1060), Expect = e-113
 Identities = 209/241 (86%), Positives = 221/241 (91%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAPVL +SQPWVEKYRPKQVKDVAHQ+EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QLFGPELYKSRV+ELNASDDRGINVVRTKIKDF              YPCPPYKII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGHRQGG-YPCPPYKII 119

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           ILDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPLSE+IM
Sbjct: 120 ILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIM 179

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           S RIL+ICKEE LN+D+EALSTLSSISQGDLRRAITYLQGAARLFGS ISSKDLISVSGV
Sbjct: 180 SSRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGV 239

Query: 738 I 740
           +
Sbjct: 240 V 240


>emb|CAN83520.1| hypothetical protein VITISV_019805 [Vitis vinifera]
          Length = 341

 Score =  412 bits (1060), Expect = e-113
 Identities = 210/241 (87%), Positives = 222/241 (92%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAPVL +SQPWVEKYRPKQVKDVAHQ+EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETTNCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QLFGPELYKSRV+ELNASDDRGINVVRTKIKDF              YPCPPYKII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAXVAVGSGHRQGG-YPCPPYKII 119

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           ILDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPLSE+IM
Sbjct: 120 ILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIM 179

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           S RIL+ICKEE LN+D+EALSTLSSISQGDLRRAITYLQGAARLFGS ISSKDLISVSGV
Sbjct: 180 SSRILHICKEEELNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSIISSKDLISVSGV 239

Query: 738 I 740
           +
Sbjct: 240 V 240


>ref|XP_003602047.1| Replication factor C subunit [Medicago truncatula]
           gi|357520353|ref|XP_003630465.1| Replication factor C
           subunit [Medicago truncatula]
           gi|217073528|gb|ACJ85124.1| unknown [Medicago
           truncatula] gi|355491095|gb|AES72298.1| Replication
           factor C subunit [Medicago truncatula]
           gi|355524487|gb|AET04941.1| Replication factor C subunit
           [Medicago truncatula] gi|388492316|gb|AFK34224.1|
           unknown [Medicago truncatula]
          Length = 339

 Score =  409 bits (1051), Expect = e-112
 Identities = 202/241 (83%), Positives = 220/241 (91%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAP++ ++QPWVEKYRPKQVKDVAHQEEVVRVLTNT+ETG CPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPIIQSTQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QLFGPELYKSRV+ELNASDDRGINVVRTKIKDF              YPCPPYKII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNKPKNG-YPCPPYKII 119

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           +LDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPL+E+IM
Sbjct: 120 VLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIM 179

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           S RI+YICKEEG+ +DAE LSTLS+ISQGDLRRAITYLQ AARLFGS+ISSKDLISVSG+
Sbjct: 180 SSRIVYICKEEGIYLDAEGLSTLSNISQGDLRRAITYLQSAARLFGSSISSKDLISVSGI 239

Query: 738 I 740
           +
Sbjct: 240 V 240


>gb|AFK40832.1| unknown [Lotus japonicus]
          Length = 342

 Score =  408 bits (1048), Expect = e-111
 Identities = 204/241 (84%), Positives = 219/241 (90%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAP++ +SQPWVEKYRPKQVKDVA+Q+EVVRVLTNT+ETG CPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPIVQSSQPWVEKYRPKQVKDVAYQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QLFGPELYKSRV+ELNASDDRGINVVRTKIKDF              YPCPPYKII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNPKKGG-YPCPPYKII 119

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           +LDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPLSE+IM
Sbjct: 120 VLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEIM 179

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           S RILYIC EEGL++DAE LSTLSSISQGDLRRAITYLQ +ARLFGS ISSKDLISVSGV
Sbjct: 180 SSRILYICNEEGLHLDAEGLSTLSSISQGDLRRAITYLQSSARLFGSHISSKDLISVSGV 239

Query: 738 I 740
           +
Sbjct: 240 V 240


>ref|XP_004250308.1| PREDICTED: replication factor C subunit 4-like [Solanum
           lycopersicum]
          Length = 339

 Score =  404 bits (1037), Expect = e-110
 Identities = 202/241 (83%), Positives = 220/241 (91%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAPV+ +SQPWVEKYRPKQVKDVAHQ+EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPVMQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QLFGPELYKSRV+ELNASDDRGINVVRTKIK+F              YPCPP+KII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSNRQSG--YPCPPFKII 118

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           ILDEADSMT+DAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPL E+IM
Sbjct: 119 ILDEADSMTQDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIM 178

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
             RIL+ICKEEGLN+D+EALSTLSSISQGDLRRAITYLQ AARLFGS+IS+K+LISVSGV
Sbjct: 179 GSRILHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISAKELISVSGV 238

Query: 738 I 740
           I
Sbjct: 239 I 239


>ref|XP_002307456.1| predicted protein [Populus trichocarpa] gi|222856905|gb|EEE94452.1|
           replication factor C 37 kDa family protein [Populus
           trichocarpa]
          Length = 342

 Score =  404 bits (1037), Expect = e-110
 Identities = 202/241 (83%), Positives = 218/241 (90%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAP+L +SQ WVEKYRPKQ+KDVAHQ+EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPLLQSSQQWVEKYRPKQIKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QL+GPELYKSRV+ELNASDDRGINVVRTKIKDF              YPCPPYKII
Sbjct: 61  AIAHQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSGQRQGV-YPCPPYKII 119

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           ILDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPL E+IM
Sbjct: 120 ILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIM 179

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           S+RIL+IC EEGL +D EALSTLSS+SQGDLRRAITYLQGAARLFGS+ISSKDLISVSG 
Sbjct: 180 SNRILHICNEEGLTLDTEALSTLSSVSQGDLRRAITYLQGAARLFGSSISSKDLISVSGA 239

Query: 738 I 740
           I
Sbjct: 240 I 240


>gb|EOY16376.1| ATPase family associated with various cellular activities (AAA)
           [Theobroma cacao]
          Length = 345

 Score =  403 bits (1035), Expect = e-110
 Identities = 205/244 (84%), Positives = 222/244 (90%), Gaps = 3/244 (1%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAPVL +SQPWVEKYRPKQVKDVAHQ+EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QLFGPELYKSRV+ELNASD+RGINVVRTKIKDF              YPCPP+KII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGSGQRQGG-YPCPPFKII 119

Query: 378 ILDEADSMTEDAQ---NALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSE 548
           ILDEADSMTEDAQ   NALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFK LSE
Sbjct: 120 ILDEADSMTEDAQACLNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKALSE 179

Query: 549 DIMSDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISV 728
           +IMS+R+L+IC EEGL++D+EALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDL+SV
Sbjct: 180 EIMSNRVLHICNEEGLHLDSEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLLSV 239

Query: 729 SGVI 740
           SGVI
Sbjct: 240 SGVI 243


>ref|NP_001185061.1| protein embryo defective 1968 [Arabidopsis thaliana]
           gi|332192021|gb|AEE30142.1| protein embryo defective
           1968 [Arabidopsis thaliana]
          Length = 341

 Score =  402 bits (1034), Expect = e-110
 Identities = 201/241 (83%), Positives = 218/241 (90%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAPVL +SQPWVEKYRPKQVKDVAHQEEVVRVLTNT++T DCPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QLFGPELYKSRV+ELNASDDRGINVVRTKIKDF              YPCP +KII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSG-YPCPSFKII 119

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           ILDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPLSE++M
Sbjct: 120 ILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM 179

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           S+RIL+IC EEGL++D EALSTLSSISQGDLRRAITYLQ A RLFGSTI+S DL++VSGV
Sbjct: 180 SNRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGV 239

Query: 738 I 740
           +
Sbjct: 240 V 240


>ref|XP_002468414.1| hypothetical protein SORBIDRAFT_01g045530 [Sorghum bicolor]
           gi|241922268|gb|EER95412.1| hypothetical protein
           SORBIDRAFT_01g045530 [Sorghum bicolor]
          Length = 339

 Score =  402 bits (1034), Expect = e-110
 Identities = 200/241 (82%), Positives = 219/241 (90%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAP++P SQPWVEKYRP+QVKDVAHQEEV+RVLTNT++T D PHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPLVPMSQPWVEKYRPRQVKDVAHQEEVIRVLTNTLQTADLPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QL+GPELYKSRV+ELNASDDRGINVVRTKIKDF              YPCPPYKII
Sbjct: 61  AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTARKAG--YPCPPYKII 118

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           ILDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPLSE++M
Sbjct: 119 ILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM 178

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           S RI++IC EEGLN+DA+ALSTLS+ISQGDLRRAITYLQ AARLFGS++SS DLISVSGV
Sbjct: 179 SSRIMHICNEEGLNLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSLSSSDLISVSGV 238

Query: 738 I 740
           I
Sbjct: 239 I 239


>ref|NP_564148.1| protein embryo defective 1968 [Arabidopsis thaliana]
           gi|75163839|sp|Q93ZX1.1|RFC4_ARATH RecName:
           Full=Replication factor C subunit 4; Short=AtRFC4;
           AltName: Full=Activator 1 subunit 4; AltName:
           Full=Protein EMBRYO DEFECTIVE 1968
           gi|15810343|gb|AAL07059.1| putative replication factor
           [Arabidopsis thaliana] gi|17065122|gb|AAL32715.1|
           Similar replication factor C, 37-kDa subunit
           [Arabidopsis thaliana] gi|21536935|gb|AAM61276.1|
           putative replication factor [Arabidopsis thaliana]
           gi|34098857|gb|AAQ56811.1| At1g21690 [Arabidopsis
           thaliana] gi|332192018|gb|AEE30139.1| protein embryo
           defective 1968 [Arabidopsis thaliana]
          Length = 339

 Score =  402 bits (1034), Expect = e-110
 Identities = 201/241 (83%), Positives = 218/241 (90%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAPVL +SQPWVEKYRPKQVKDVAHQEEVVRVLTNT++T DCPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QLFGPELYKSRV+ELNASDDRGINVVRTKIKDF              YPCP +KII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSG-YPCPSFKII 119

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           ILDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPLSE++M
Sbjct: 120 ILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM 179

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           S+RIL+IC EEGL++D EALSTLSSISQGDLRRAITYLQ A RLFGSTI+S DL++VSGV
Sbjct: 180 SNRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGV 239

Query: 738 I 740
           +
Sbjct: 240 V 240


>gb|EMT17871.1| Replication factor C subunit 4 [Aegilops tauschii]
          Length = 339

 Score =  402 bits (1033), Expect = e-110
 Identities = 201/241 (83%), Positives = 219/241 (90%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAP++P+SQPWVEKYRP+QVKDVAHQEEVVRVLTNT+ET D PHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTNTLETADLPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QL+GPELYKSRV+ELNASD+RGINVVRTKIKDF              YPCPPYKII
Sbjct: 61  AIAYQLYGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGSARKGG--YPCPPYKII 118

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           ILDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPLSED+M
Sbjct: 119 ILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVM 178

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           S+RIL+IC EEGL +DA+ALSTLS+ISQGDLRRAITYLQ AARLFGS+IS+ DLISVSG 
Sbjct: 179 SNRILHICNEEGLTLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSISASDLISVSGA 238

Query: 738 I 740
           I
Sbjct: 239 I 239


>ref|XP_002441912.1| hypothetical protein SORBIDRAFT_08g004780 [Sorghum bicolor]
           gi|241942605|gb|EES15750.1| hypothetical protein
           SORBIDRAFT_08g004780 [Sorghum bicolor]
          Length = 339

 Score =  402 bits (1033), Expect = e-110
 Identities = 200/241 (82%), Positives = 219/241 (90%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAP++P SQPWVEKYRP+QVKDVAHQEEV+RVLTNT++T D PHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPLVPMSQPWVEKYRPRQVKDVAHQEEVIRVLTNTLQTADLPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QL+GPELYKSRV+ELNASDDRGINVVRTKIKDF              YPCPPYKII
Sbjct: 61  AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTARKAG--YPCPPYKII 118

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           ILDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPL SRCAKFRFKPLSE++M
Sbjct: 119 ILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLVSRCAKFRFKPLSEEVM 178

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           S+RI++IC EEGLN+DA+ALSTLS+ISQGDLRRAITYLQ AARLFGS+ISS DLISVSGV
Sbjct: 179 SNRIMHICNEEGLNLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSISSSDLISVSGV 238

Query: 738 I 740
           I
Sbjct: 239 I 239


>ref|XP_006351139.1| PREDICTED: replication factor C subunit 2-like [Solanum tuberosum]
          Length = 339

 Score =  402 bits (1032), Expect = e-110
 Identities = 200/241 (82%), Positives = 220/241 (91%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAPV+ +SQPWVEKYRPK+VKDVAHQ+EVVRVLTNT+ET +CPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPVMQSSQPWVEKYRPKKVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QLFGPELYKSRV+ELNASDDRGINVVRTKIK+F              YPCPP+KII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSNRQSG--YPCPPFKII 118

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           ILDEADSMT+DAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPL E++M
Sbjct: 119 ILDEADSMTQDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEVM 178

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
             RIL+ICKEEGLN+D+EALSTLSSISQGDLRRAITYLQ AARLFGS+IS+K+LISVSGV
Sbjct: 179 GSRILHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISAKELISVSGV 238

Query: 738 I 740
           I
Sbjct: 239 I 239


>ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-like isoform 1 [Glycine
           max]
          Length = 342

 Score =  402 bits (1032), Expect = e-110
 Identities = 201/241 (83%), Positives = 219/241 (90%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAP+L ++QPWVEKYRPKQVKDVAHQ+EVVRVLTNT+ETG CPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPILQSTQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QLFGPELYKSRV+ELNASDDRGINVVRTKIKDF              YPCPP+KII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQRKSG-YPCPPFKII 119

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           +LDEADSMTEDAQNALRRTMETYSKVTRFFF+CNY+SRIIEPLASRCAKFRFKPLSE+IM
Sbjct: 120 VLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIM 179

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           S RILYI +EEGL +DAEALSTLSSIS GDLRRAITYLQ AARLFGS+ISS++LISVSGV
Sbjct: 180 SSRILYISQEEGLCLDAEALSTLSSISHGDLRRAITYLQSAARLFGSSISSENLISVSGV 239

Query: 738 I 740
           +
Sbjct: 240 V 240


>gb|ESQ34629.1| hypothetical protein EUTSA_v10008129mg [Eutrema salsugineum]
          Length = 339

 Score =  401 bits (1030), Expect = e-109
 Identities = 201/241 (83%), Positives = 217/241 (90%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAPVL +SQPWVEKYRPKQVKDVAHQEEVVRVLTNT+ET +CPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QLFGPELYKSRV+ELNASDDRGINVVRTKIKDF              YPCP +KII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNNRQGG-YPCPSFKII 119

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           ILDEADSMTEDAQNALRRTMETYSKVTRFFF+CNYISRIIEPLASRCAKFRFKPLSE++M
Sbjct: 120 ILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVM 179

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           ++RIL+IC EEGLN+  EALSTLSSISQGDLRRAITYLQ AARLFGSTI+S DL+ VSGV
Sbjct: 180 TNRILHICNEEGLNLGGEALSTLSSISQGDLRRAITYLQSAARLFGSTITSTDLLDVSGV 239

Query: 738 I 740
           +
Sbjct: 240 V 240


>ref|XP_003526646.1| PREDICTED: replication factor C subunit 4-like isoform 1 [Glycine
           max]
          Length = 342

 Score =  400 bits (1029), Expect = e-109
 Identities = 201/241 (83%), Positives = 218/241 (90%)
 Frame = +3

Query: 18  MAPVLPNSQPWVEKYRPKQVKDVAHQEEVVRVLTNTIETGDCPHMLFYGPPGTGKTTSAL 197
           MAP+L +SQPWVEKYRPKQVKDVAHQ+EVVRVLTNT+ETG CPHMLFYGPPGTGKTT+AL
Sbjct: 1   MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 198 AIARQLFGPELYKSRVMELNASDDRGINVVRTKIKDFXXXXXXXXXXXXXXYPCPPYKII 377
           AIA QLFGPELYKSRV+ELNASDDRGINVVRTKIKDF              YPCPP+KII
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTNQCKNG-YPCPPFKII 119

Query: 378 ILDEADSMTEDAQNALRRTMETYSKVTRFFFLCNYISRIIEPLASRCAKFRFKPLSEDIM 557
           +LDEADSMTEDAQNALRRTMETYSKVTRFFF+CNY+SRIIEPLASRCAKFRFKPLSE+IM
Sbjct: 120 VLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIM 179

Query: 558 SDRILYICKEEGLNIDAEALSTLSSISQGDLRRAITYLQGAARLFGSTISSKDLISVSGV 737
           S RILYI +EEGL +DAEALSTLS IS GDLRRAITYLQ AARLFGS+ISS++LISVSGV
Sbjct: 180 SSRILYISQEEGLCLDAEALSTLSFISHGDLRRAITYLQSAARLFGSSISSENLISVSGV 239

Query: 738 I 740
           +
Sbjct: 240 V 240


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